RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W GFA1P14742 717 aaKnown RBP7.47□□□□□ -1.21
PRE5YMR314W APA1P16550 321 aaKnown RBP7.47□□□□□ -1.21
PRE5YMR314W TUP1P16649 713 aa7.47□□□□□ -1.21
PRE5YMR314W PRI2P20457 528 aa7.47□□□□□ -1.21
PRE5YMR314W PHO84P25297 587 aaKnown RBP7.47□□□□□ -1.21
PRE5YMR314W EMC1P25574 760 aa7.47□□□□□ -1.21
PRE5YMR314W HOG1P32485 435 aa7.47□□□□□ -1.21
PRE5YMR314W SPS19P32573 292 aaKnown RBP7.47□□□□□ -1.21
PRE5YMR314W AIM26P32858 118 aa7.47□□□□□ -1.21
PRE5YMR314W MRS6P32864 603 aaKnown RBP7.47□□□□□ -1.21
PRE5YMR314W SQT1P35184 431 aa7.47□□□□□ -1.21
PRE5YMR314W RRM3P38766 723 aa7.47□□□□□ -1.21
PRE5YMR314W ELO3P40319 345 aa7.47□□□□□ -1.21
PRE5YMR314W ATM1P40416 690 aa7.47□□□□□ -1.21
PRE5YMR314W YIR014WP40570 242 aa7.47□□□□□ -1.21
PRE5YMR314W CSN12P47130 423 aa7.47□□□□□ -1.21
PRE5YMR314W ROM1P53046 1155 aa7.47□□□□□ -1.21
PRE5YMR314W YGL260WP53056 76 aa7.47□□□□□ -1.21
PRE5YMR314W HST3P53687 447 aa7.47□□□□□ -1.21
PRE5YMR314W REG1Q00816 1014 aa7.47□□□□□ -1.21
PRE5YMR314W EMI1Q04406 187 aa7.47□□□□□ -1.21
PRE5YMR314W LDB18Q07887 179 aa7.47□□□□□ -1.21
PRE5YMR314W YLR030WQ07967 263 aa7.47□□□□□ -1.21
PRE5YMR314W HSP42Q12329 375 aa7.47□□□□□ -1.21
PRE5YMR314W SEC23P15303 768 aaKnown RBP7.46□□□□□ -1.22
PRE5YMR314W AEP1P32493 518 aa7.46□□□□□ -1.22
PRE5YMR314W GMH1P36125 273 aa7.46□□□□□ -1.22
PRE5YMR314W TFA2P36145 328 aa7.46□□□□□ -1.22
PRE5YMR314W YBR259WP38338 688 aa7.46□□□□□ -1.22
PRE5YMR314W DED81P38707 554 aaKnown RBP7.46□□□□□ -1.22
PRE5YMR314W CYC2P38909 366 aa7.46□□□□□ -1.22
PRE5YMR314W ASK10P48361 1146 aa7.46□□□□□ -1.22
PRE5YMR314W RFX1P48743 811 aa7.46□□□□□ -1.22
PRE5YMR314W COG1P53079 417 aa7.46□□□□□ -1.22
PRE5YMR314W ARP4P80428 489 aa7.46□□□□□ -1.22
PRE5YMR314W RHO3Q00245 231 aaKnown RBP7.46□□□□□ -1.22
PRE5YMR314W CDA1Q06702 301 aa7.46□□□□□ -1.22
PRE5YMR314W FAS1P07149 2051 aaKnown RBP7.45□□□□□ -1.22
PRE5YMR314W SEC16P48415 2195 aaKnown RBP7.45□□□□□ -1.22
PRE5YMR314W AI4P03878 556 aa7.45□□□□□ -1.22
PRE5YMR314W PDR1P12383 1068 aa7.45□□□□□ -1.22
PRE5YMR314W MSB1P21339 1137 aaKnown RBP7.45□□□□□ -1.22
PRE5YMR314W DCC1P25559 380 aa7.45□□□□□ -1.22
PRE5YMR314W PLC1P32383 869 aa7.45□□□□□ -1.22
PRE5YMR314W PET112P33893 541 aa7.45□□□□□ -1.22
PRE5YMR314W SEF1P34228 1148 aa7.45□□□□□ -1.22
PRE5YMR314W MGS1P40151 587 aa7.45□□□□□ -1.22
PRE5YMR314W RIM21P48565 533 aa7.45□□□□□ -1.22
PRE5YMR314W YGR127WP53275 312 aa7.45□□□□□ -1.22
PRE5YMR314W MSH6Q03834 1242 aa7.45□□□□□ -1.22
PRE5YMR314W RRN11Q04712 507 aa7.45□□□□□ -1.22
PRE5YMR314W SMF3Q12078 473 aaPredicted RBP7.45□□□□□ -1.22
PRE5YMR314W RRP12Q12754 1228 aaKnown RBP7.45□□□□□ -1.22
PRE5YMR314W AI5_ALPHAQ9ZZX1 630 aa7.45□□□□□ -1.22
PRE5YMR314W CPA1P07258 411 aaKnown RBP7.44□□□□□ -1.22
PRE5YMR314W HOP09932 586 aa7.44□□□□□ -1.22
PRE5YMR314W SEC62P21825 274 aa7.44□□□□□ -1.22
PRE5YMR314W MCM2P29469 868 aa7.44□□□□□ -1.22
PRE5YMR314W HXT3P32466 567 aaKnown RBP7.44□□□□□ -1.22
PRE5YMR314W PET309P32522 965 aaPredicted RBP7.44□□□□□ -1.22
PRE5YMR314W SKN1P33336 771 aa7.44□□□□□ -1.22
PRE5YMR314W PHO11P35842 467 aa7.44□□□□□ -1.22
PRE5YMR314W EMC3P36039 253 aa7.44□□□□□ -1.22
PRE5YMR314W PHO12P38693 467 aa7.44□□□□□ -1.22
PRE5YMR314W DBP8P38719 431 aa7.44□□□□□ -1.22
PRE5YMR314W KHA1P40309 873 aa7.44□□□□□ -1.22
PRE5YMR314W LRO1P40345 661 aa7.44□□□□□ -1.22
PRE5YMR314W MMM1P41800 426 aa7.44□□□□□ -1.22
PRE5YMR314W RGD2P43556 714 aa7.44□□□□□ -1.22
PRE5YMR314W IKS1P47042 667 aa7.44□□□□□ -1.22
PRE5YMR314W TIM13P53299 105 aa7.44□□□□□ -1.22
PRE5YMR314W PEX25Q02969 394 aa7.44□□□□□ -1.22
PRE5YMR314W ARX1Q03862 593 aaKnown RBP7.44□□□□□ -1.22
PRE5YMR314W GSF2Q04697 403 aaKnown RBP7.44□□□□□ -1.22
PRE5YMR314W FMP45Q07651 309 aa7.44□□□□□ -1.22
PRE5YMR314W AAD15Q08361 143 aa7.44□□□□□ -1.22
PRE5YMR314W RPS6AP0CX37 236 aaKnown RBP7.43□□□□□ -1.22
PRE5YMR314W RPS6BP0CX38 236 aaPredicted RBP7.43□□□□□ -1.22
PRE5YMR314W SIN4P32259 974 aa7.43□□□□□ -1.22
PRE5YMR314W DOM34P33309 386 aa7.43□□□□□ -1.22
PRE5YMR314W OTU2P38747 307 aaKnown RBP7.43□□□□□ -1.22
PRE5YMR314W LYS1P38998 373 aaRIP-Chip data7.43□□□□□ -1.22not detected
PRE5YMR314W RSC4Q02206 625 aa7.43□□□□□ -1.22
PRE5YMR314W CCE1Q03702 353 aa7.43□□□□□ -1.22
PRE5YMR314W RSF1Q05043 376 aa7.43□□□□□ -1.22
PRE5YMR314W TMA16Q08687 178 aa7.43□□□□□ -1.22
PRE5YMR314W BUD7Q08754 746 aa7.43□□□□□ -1.22
PRE5YMR314W PFA4Q12006 378 aa7.43□□□□□ -1.22
PRE5YMR314W MDM35O60200 86 aa7.42□□□□□ -1.22
PRE5YMR314W YSR3P23501 404 aa7.42□□□□□ -1.22
PRE5YMR314W MSH1P25846 959 aa7.42□□□□□ -1.22
PRE5YMR314W NRP1P32770 719 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
PRE5YMR314W SHM1P37292 490 aaPredicted RBP7.42□□□□□ -1.22
PRE5YMR314W HLJ1P48353 224 aa7.42□□□□□ -1.22
PRE5YMR314W ARE2P53629 642 aaKnown RBP7.42□□□□□ -1.22
PRE5YMR314W FRE4P53746 719 aa7.42□□□□□ -1.22
PRE5YMR314W CDC14Q00684 551 aa7.42□□□□□ -1.22
PRE5YMR314W IVY1Q04934 453 aa7.42□□□□□ -1.22
PRE5YMR314W GYP1Q08484 637 aa7.42□□□□□ -1.22
PRE5YMR314W APC11Q12157 165 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms