RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C TY2A-BQ12260 438 aa5.1□□□□□ -1.59
BLS1YLR408C TY2A-OR2Q12293 438 aa5.1□□□□□ -1.59
BLS1YLR408C TY2A-DR1Q12392 438 aa5.1□□□□□ -1.59
BLS1YLR408C TY2A-OR1Q12439 438 aa5.1□□□□□ -1.59
BLS1YLR408C TY2A-DR3Q99303 438 aa5.1□□□□□ -1.59
BLS1YLR408C ULP2P40537 1034 aaPredicted RBP5.09□□□□□ -1.59
BLS1YLR408C CDC1P40986 491 aa5.09□□□□□ -1.59
BLS1YLR408C SNO3P43544 222 aa5.09□□□□□ -1.59
BLS1YLR408C IRC7P43623 340 aa5.09□□□□□ -1.59
BLS1YLR408C IML2P47031 731 aa5.09□□□□□ -1.59
BLS1YLR408C ASE1P50275 885 aa5.09□□□□□ -1.59
BLS1YLR408C COG1P53079 417 aa5.09□□□□□ -1.59
BLS1YLR408C ADE16P54113 591 aaKnown RBP5.09□□□□□ -1.59
BLS1YLR408C URE2P23202 354 aaKnown RBP5.08□□□□□ -1.6
BLS1YLR408C RAD16P31244 790 aa5.08□□□□□ -1.6
BLS1YLR408C RRN3P36070 627 aa5.08□□□□□ -1.6
BLS1YLR408C YPR003CP53394 754 aa5.08□□□□□ -1.6
BLS1YLR408C YOR389WQ08912 624 aa5.08□□□□□ -1.6
BLS1YLR408C PFK2P16862 959 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
BLS1YLR408C MDM10P18409 493 aa5.07□□□□□ -1.6
BLS1YLR408C SRP54P20424 541 aaKnown RBP5.07□□□□□ -1.6
BLS1YLR408C UME6P39001 836 aa5.07□□□□□ -1.6
BLS1YLR408C IST3P40565 148 aaPredicted RBP5.07□□□□□ -1.6
BLS1YLR408C DCP2P53550 970 aaKnown RBP5.07□□□□□ -1.6
BLS1YLR408C SNU56Q03782 492 aaKnown RBP5.07□□□□□ -1.6
BLS1YLR408C TMA16Q08687 178 aa5.07□□□□□ -1.6
BLS1YLR408C ILS1P09436 1072 aaKnown RBP5.06□□□□□ -1.6
BLS1YLR408C TEF4P36008 412 aaKnown RBP5.06□□□□□ -1.6
BLS1YLR408C XBP1P40489 647 aa5.06□□□□□ -1.6
BLS1YLR408C ORC5P50874 479 aa5.06□□□□□ -1.6
BLS1YLR408C ERG13P54839 491 aaKnown RBP5.06□□□□□ -1.6
BLS1YLR408C THI3Q07471 609 aa5.06□□□□□ -1.6
BLS1YLR408C SSP2Q08646 371 aa5.06□□□□□ -1.6
BLS1YLR408C GET3Q12154 354 aaKnown RBP5.06□□□□□ -1.6
BLS1YLR408C VCX1Q99385 411 aa5.06□□□□□ -1.6
BLS1YLR408C CBF2P32504 956 aa5.05□□□□□ -1.6
BLS1YLR408C SRB5P32585 307 aa5.05□□□□□ -1.6
BLS1YLR408C RPT3P33298 428 aaKnown RBP5.05□□□□□ -1.6
BLS1YLR408C SLC1P33333 303 aa5.05□□□□□ -1.6
BLS1YLR408C AXL2P38928 823 aa5.05□□□□□ -1.6
BLS1YLR408C YER010CP40011 234 aa5.05□□□□□ -1.6
BLS1YLR408C KAP123P40069 1113 aaKnown RBP5.05□□□□□ -1.6
BLS1YLR408C ASG1P40467 964 aa5.05□□□□□ -1.6
BLS1YLR408C PSA1P41940 361 aaKnown RBP5.05□□□□□ -1.6
BLS1YLR408C YJL107CP42947 387 aa5.05□□□□□ -1.6
BLS1YLR408C VPS4P52917 437 aa5.05□□□□□ -1.6
BLS1YLR408C YNR061CP53747 219 aa5.05□□□□□ -1.6
BLS1YLR408C NEW1Q08972 1196 aaKnown RBP5.05□□□□□ -1.6
BLS1YLR408C YMR085WP0CF18 432 aa5.04□□□□□ -1.6
BLS1YLR408C ERG8P24521 451 aa5.04□□□□□ -1.6
BLS1YLR408C TFC3P34111 1160 aa5.04□□□□□ -1.6
BLS1YLR408C AAP1P37898 856 aaKnown RBP5.04□□□□□ -1.6
BLS1YLR408C ARN1P38731 627 aa5.04□□□□□ -1.6
BLS1YLR408C PSD1P39006 500 aa5.04□□□□□ -1.6
BLS1YLR408C TPA1P40032 644 aaKnown RBP5.04□□□□□ -1.6
BLS1YLR408C CFD1P40558 293 aa5.04□□□□□ -1.6
BLS1YLR408C RPN11P43588 306 aaKnown RBP5.04□□□□□ -1.6
BLS1YLR408C SWA2Q06677 668 aa5.04□□□□□ -1.6
BLS1YLR408C OPY2Q06810 360 aa5.04□□□□□ -1.6
BLS1YLR408C CRC1Q12289 327 aa5.04□□□□□ -1.6
BLS1YLR408C ERG27Q12452 347 aaKnown RBP5.04□□□□□ -1.6
BLS1YLR408C YOL087CQ99247 1116 aa5.04□□□□□ -1.6
BLS1YLR408C RPB2P08518 1224 aaKnown RBP5.03□□□□□ -1.6
BLS1YLR408C GUK1P15454 187 aaKnown RBP5.03□□□□□ -1.6
BLS1YLR408C PTP1P25044 335 aa5.03□□□□□ -1.6
BLS1YLR408C RER1P25560 188 aa5.03□□□□□ -1.6
BLS1YLR408C COQ3P27680 312 aa5.03□□□□□ -1.6
BLS1YLR408C CNS1P33313 385 aa5.03□□□□□ -1.6
BLS1YLR408C RIC1P40395 1056 aa5.03□□□□□ -1.6
BLS1YLR408C SWP82P43554 623 aa5.03□□□□□ -1.6
BLS1YLR408C NET1P47035 1189 aa5.03□□□□□ -1.6
BLS1YLR408C COP1P53622 1201 aaKnown RBP5.03□□□□□ -1.6
BLS1YLR408C EAF7P53911 425 aaKnown RBP5.03□□□□□ -1.6
BLS1YLR408C REG1Q00816 1014 aa5.03□□□□□ -1.6
BLS1YLR408C RCO1Q04779 684 aa5.03□□□□□ -1.6
BLS1YLR408C CRN1Q06440 651 aa5.03□□□□□ -1.6
BLS1YLR408C SSH4P32343 579 aa5.02□□□□□ -1.61
BLS1YLR408C ECM32P32644 1121 aaKnown RBP5.02□□□□□ -1.61
BLS1YLR408C NTR2P36118 322 aaPredicted RBP5.02□□□□□ -1.61
BLS1YLR408C SEC31P38968 1273 aaKnown RBP5.02□□□□□ -1.61
BLS1YLR408C PIG1Q06216 648 aa5.02□□□□□ -1.61
BLS1YLR408C TOP1P04786 769 aa5.01□□□□□ -1.61
BLS1YLR408C MRP2P10663 115 aaPredicted RBP5.01□□□□□ -1.61
BLS1YLR408C MSS51P32335 436 aa5.01□□□□□ -1.61
BLS1YLR408C OCT1P35999 772 aa5.01□□□□□ -1.61
BLS1YLR408C ADE17P38009 592 aaKnown RBP5.01□□□□□ -1.61
BLS1YLR408C SNO4Q04902 237 aa5.01□□□□□ -1.61
BLS1YLR408C PDR8Q06149 701 aa5.01□□□□□ -1.61
BLS1YLR408C PSK2Q08217 1101 aa5.01□□□□□ -1.61
BLS1YLR408C HSP33Q08914 237 aaKnown RBP5.01□□□□□ -1.61
BLS1YLR408C HSP32Q08992 237 aa5.01□□□□□ -1.61
BLS1YLR408C NUS1Q12063 375 aa5.01□□□□□ -1.61
BLS1YLR408C YLR302CO13544 120 aa5□□□□□ -1.61
BLS1YLR408C GAL4P04386 881 aa5□□□□□ -1.61
BLS1YLR408C SUI3P09064 285 aaKnown RBP5□□□□□ -1.61
BLS1YLR408C YER190C-BP0CX94 160 aa5□□□□□ -1.61
BLS1YLR408C YEL077W-AP0CX95 160 aa5□□□□□ -1.61
BLS1YLR408C YGR296C-BP0CX96 160 aa5□□□□□ -1.61
BLS1YLR408C YPL283W-BP0CX97 160 aa5□□□□□ -1.61
BLS1YLR408C YPR204C-AP0CX98 160 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms