RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W RAM1P22007 431 aa7.45□□□□□ -1.22
CTF3YLR381W NPP1P25353 742 aa7.45□□□□□ -1.22
CTF3YLR381W CAM1P29547 415 aaKnown RBP7.45□□□□□ -1.22
CTF3YLR381W IMP2'P32351 346 aa7.45□□□□□ -1.22
CTF3YLR381W HIR1P32479 840 aa7.45□□□□□ -1.22
CTF3YLR381W APM3P38153 483 aa7.45□□□□□ -1.22
CTF3YLR381W MSR1P38714 643 aa7.45□□□□□ -1.22
CTF3YLR381W YDR089WP38966 869 aa7.45□□□□□ -1.22
CTF3YLR381W SIW14P53965 281 aa7.45□□□□□ -1.22
CTF3YLR381W UBX4P54730 416 aa7.45□□□□□ -1.22
CTF3YLR381W KAP120Q02932 1032 aa7.45□□□□□ -1.22
CTF3YLR381W NHP10Q03435 203 aa7.45□□□□□ -1.22
CTF3YLR381W SEG1Q04279 960 aa7.45□□□□□ -1.22
CTF3YLR381W CRR1Q05790 422 aa7.45□□□□□ -1.22
CTF3YLR381W FMP45Q07651 309 aa7.45□□□□□ -1.22
CTF3YLR381W LDB17Q12342 491 aa7.45□□□□□ -1.22
CTF3YLR381W GAL10P04397 699 aa7.44□□□□□ -1.22
CTF3YLR381W RPP1AP05318 106 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W LAT1P12695 482 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W TOP3P13099 656 aa7.44□□□□□ -1.22
CTF3YLR381W RNR3P21672 869 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W PTC6P25646 442 aa7.44□□□□□ -1.22
CTF3YLR381W SPT14P32363 452 aa7.44□□□□□ -1.22
CTF3YLR381W NUP2P32499 720 aa7.44□□□□□ -1.22
CTF3YLR381W TOM20P35180 183 aa7.44□□□□□ -1.22
CTF3YLR381W RXT2P38255 430 aa7.44□□□□□ -1.22
CTF3YLR381W YMR262WP38430 313 aa7.44□□□□□ -1.22
CTF3YLR381W SOH1P38633 127 aa7.44□□□□□ -1.22
CTF3YLR381W COX16P47081 118 aa7.44□□□□□ -1.22
CTF3YLR381W YGR153WP48238 217 aa7.44□□□□□ -1.22
CTF3YLR381W RAI1P53063 387 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W RET3P53600 189 aa7.44□□□□□ -1.22
CTF3YLR381W TDA9Q04545 1251 aa7.44□□□□□ -1.22
CTF3YLR381W YPR091CQ06833 770 aa7.44□□□□□ -1.22
CTF3YLR381W SSF2Q12153 453 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W YCL001W-BQ96VH2 84 aa7.44□□□□□ -1.22
CTF3YLR381W CBP2P03874 630 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W ADE5,7P07244 802 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W HOM2P13663 365 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W VMA16P23968 213 aa7.44□□□□□ -1.22
CTF3YLR381W CNB1P25296 175 aa7.44□□□□□ -1.22
CTF3YLR381W ASF2P32448 525 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W SFA1P32771 386 aa7.44□□□□□ -1.22
CTF3YLR381W RRN6P32786 894 aa7.44□□□□□ -1.22
CTF3YLR381W GLY1P37303 387 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W NOP16P40007 231 aaKnown RBP7.44□□□□□ -1.22
CTF3YLR381W YAT2P40017 923 aa7.44□□□□□ -1.22
CTF3YLR381W YJR141WP47172 347 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W ROM1P53046 1155 aa7.44□□□□□ -1.22
CTF3YLR381W FMP48P53233 369 aa7.44□□□□□ -1.22
CTF3YLR381W APP1P53933 587 aa7.44□□□□□ -1.22
CTF3YLR381W RRN5Q02983 363 aa7.44□□□□□ -1.22
CTF3YLR381W YDR541CQ03049 344 aa7.44□□□□□ -1.22
CTF3YLR381W VHS1Q03785 461 aa7.44□□□□□ -1.22
CTF3YLR381W MHR1Q06630 226 aa7.44□□□□□ -1.22
CTF3YLR381W YDR306CQ06640 478 aa7.44□□□□□ -1.22
CTF3YLR381W IWR1Q07532 353 aaPredicted RBP7.44□□□□□ -1.22
CTF3YLR381W FLC1Q08967 793 aa7.44□□□□□ -1.22
CTF3YLR381W DCN1Q12395 269 aa7.44□□□□□ -1.22
CTF3YLR381W RPL25P04456 142 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W SEC1P30619 724 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W DUG2P38149 878 aa7.43□□□□□ -1.22
CTF3YLR381W COS111P38308 924 aa7.43□□□□□ -1.22
CTF3YLR381W MMS21P38632 267 aa7.43□□□□□ -1.22
CTF3YLR381W FRT2P39734 528 aa7.43□□□□□ -1.22
CTF3YLR381W EXO1P39875 702 aa7.43□□□□□ -1.22
CTF3YLR381W YJR061WP40355 935 aa7.43□□□□□ -1.22
CTF3YLR381W LIA1P47120 325 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W SLI1P53304 468 aa7.43□□□□□ -1.22
CTF3YLR381W MNT4P53745 580 aa7.43□□□□□ -1.22
CTF3YLR381W GIM3P53900 129 aa7.43□□□□□ -1.22
CTF3YLR381W SPP1Q03012 353 aa7.43□□□□□ -1.22
CTF3YLR381W BUR2Q05949 395 aa7.43□□□□□ -1.22
CTF3YLR381W YNG1Q08465 219 aa7.43□□□□□ -1.22
CTF3YLR381W DIA2Q08496 732 aaPredicted RBP7.43□□□□□ -1.22
CTF3YLR381W MUM3Q08750 479 aa7.43□□□□□ -1.22
CTF3YLR381W AEP3Q12089 606 aa7.43□□□□□ -1.22
CTF3YLR381W GET3Q12154 354 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W ADF1Q2V2Q1 113 aa7.43□□□□□ -1.22
CTF3YLR381W ATP2P00830 511 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W THS1P04801 734 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W NSP1P14907 823 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W SAR1P20606 190 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W KGD1P20967 1014 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W IRE1P32361 1115 aa7.43□□□□□ -1.22
CTF3YLR381W PET309P32522 965 aaPredicted RBP7.43□□□□□ -1.22
CTF3YLR381W PPQ1P32945 549 aa7.43□□□□□ -1.22
CTF3YLR381W CAF4P36130 643 aa7.43□□□□□ -1.22
CTF3YLR381W GRX7P38068 203 aa7.43□□□□□ -1.22
CTF3YLR381W EDS1P38073 919 aa7.43□□□□□ -1.22
CTF3YLR381W MCM7P38132 845 aa7.43□□□□□ -1.22
CTF3YLR381W HAL5P38970 855 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W ALA1P40825 983 aaKnown RBP7.43□□□□□ -1.22
CTF3YLR381W VTC4P47075 721 aa7.43□□□□□ -1.22
CTF3YLR381W COG1P53079 417 aa7.43□□□□□ -1.22
CTF3YLR381W CWC24P53769 259 aa7.43□□□□□ -1.22
CTF3YLR381W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
CTF3YLR381W SKI8Q02793 397 aaPredicted RBP7.43□□□□□ -1.22
CTF3YLR381W RSC9Q03124 581 aa7.43□□□□□ -1.22
CTF3YLR381W RBS1Q05672 457 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms