RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	GIS1	Q03833	894 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	RCO1	Q04779	684 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	GPN2	Q08726	347 aa	Predicted RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	RTC1	Q08281	1341 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	SES1	P07284	462 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	OLE1	P21147	510 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	SGF29	P25554	259 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	MRPL9	P31334	269 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	KTR3	P38130	404 aa	Predicted RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	YBR225W	P38321	900 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	YIL161W	P40449	235 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	SEC24	P40482	926 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	MSY1	P48527	492 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	RBG2	P53295	368 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	CPR8	P53728	308 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	RIX7	Q07844	837 aa	Known RBP	2.26	□□□□□ -2.05
RIC1	YLR039C	YOR111W	Q99210	232 aa		2.26	□□□□□ -2.05
RIC1	YLR039C	PMA2	P19657	947 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	AAD3	P25612	363 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	SWC3	P31376	625 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	SIP1	P32578	815 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	HES1	P35843	434 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	TDP1	P38319	544 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	TPA1	P40032	644 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	MAM1	P40065	302 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	ADE16	P54113	591 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	CTF4	Q01454	927 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	PLM2	Q04383	521 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	YDR109C	Q04585	715 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	MFB1	Q04922	465 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	AHA1	Q12449	350 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	RPL7A	P05737	244 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	CDC24	P11433	854 aa	Predicted RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	SRP54	P20424	541 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	OAR1	P35731	278 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	MUP3	P38734	546 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	EXO1	P39875	702 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	SLZ1	P40167	298 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	IME4	P41833	600 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	MRX6	P48564	524 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	MUB1	Q03162	620 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	GSF2	Q04697	403 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	CRN1	Q06440	651 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	TSR2	Q06672	205 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	YOL159C	Q08300	171 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
RIC1	YLR039C	RPL7B	Q12213	244 aa	Known RBP	2.25	□□□□□ -2.05
RIC1	YLR039C	HSL1	P34244	1518 aa		2.25	□□□□□ -2.05
RIC1	YLR039C	AQY1	P0CD91	305 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	POL4	P25615	582 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	SRB5	P32585	307 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	MNN2	P38069	597 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	TDA10	P42938	290 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	RMD8	P43620	662 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	ARC1	P46672	376 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	COG2	P53271	262 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	RPC11	Q04307	110 aa	Predicted RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	SWA2	Q06677	668 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	CYK3	Q07533	885 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	CRT10	Q08226	957 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	SPE4	Q12455	300 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	FOB1	O13329	566 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	LAC1	P28496	418 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	GSH1	P32477	678 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	RPF2	P36160	344 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	VBA2	P38358	474 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	FUN12	P39730	1002 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	AAD10	P47182	288 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	TIM44	Q01852	431 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	TAF11	Q04226	346 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	ERG27	Q12452	347 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	YBR126W-A	Q8TGU7	68 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	SPO16	P17122	198 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	CMK1	P27466	446 aa	Known RBP	2.24	□□□□□ -2.05
RIC1	YLR039C	NFU1	P32860	256 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	UBP13	P38187	747 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	YPR003C	P53394	754 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	RAD34	Q06665	692 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	ATG23	Q06671	453 aa		2.24	□□□□□ -2.05
RIC1	YLR039C	MAL33	P38157	468 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	SRO77	P38163	1010 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	IRC6	P43615	237 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	VPS75	P53853	264 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	FCP1	Q03254	732 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	GIR2	Q03768	265 aa	Predicted RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	ULA1	Q12059	462 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	NUS1	Q12063	375 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	SPA2	P23201	1466 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	MET17	P06106	444 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	MRP7	P12687	371 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	SAT4	P25333	603 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	SAC6	P32599	642 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	NTR2	P36118	322 aa	Predicted RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	IMD2	P38697	523 aa	Known RBP	2.23	□□□□□ -2.05
RIC1	YLR039C	RTS1	P38903	757 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	ERV46	P39727	415 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
RIC1	YLR039C	DJP1	P40564	432 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	SAE2	P46946	345 aa		2.23	□□□□□ -2.05
RIC1	YLR039C	UBX6	P47049	396 aa		2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms