RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W SAE2P46946 345 aa1.17□□□□□ -2.22
PRP16YKR086W YNL144CP53907 740 aa1.17□□□□□ -2.22
PRP16YKR086W SEC5P89102 971 aa1.17□□□□□ -2.22
PRP16YKR086W PFA5Q03289 374 aa1.17□□□□□ -2.22
PRP16YKR086W CEF1Q03654 590 aaPredicted RBP1.17□□□□□ -2.22
PRP16YKR086W VPS64Q03944 604 aa1.17□□□□□ -2.22
PRP16YKR086W AFT2Q08957 416 aa1.17□□□□□ -2.22
PRP16YKR086W PSF3Q12146 194 aa1.17□□□□□ -2.22
PRP16YKR086W AI5_ALPHAQ9ZZX1 630 aa1.17□□□□□ -2.22
PRP16YKR086W PSK1P31374 1356 aa1.17□□□□□ -2.22
PRP16YKR086W DUR1,2P32528 1835 aaKnown RBP1.17□□□□□ -2.22
PRP16YKR086W TPK1P06244 397 aa1.16□□□□□ -2.22
PRP16YKR086W LOT5P34234 306 aa1.16□□□□□ -2.22
PRP16YKR086W IRC5P43610 853 aa1.16□□□□□ -2.22
PRP16YKR086W COG2P53271 262 aa1.16□□□□□ -2.22
PRP16YKR086W ZDS2P54786 942 aa1.16□□□□□ -2.22
PRP16YKR086W WAR1Q03631 944 aa1.16□□□□□ -2.22
PRP16YKR086W RPL7AP05737 244 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W MIS1P09440 975 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W AQY1P0CD91 305 aa1.16□□□□□ -2.22
PRP16YKR086W YCP4P25349 247 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W PGS1P25578 521 aa1.16□□□□□ -2.22
PRP16YKR086W BLI1P35727 113 aa1.16□□□□□ -2.22
PRP16YKR086W LTP1P40347 161 aa1.16□□□□□ -2.22
PRP16YKR086W HIS6P40545 261 aa1.16□□□□□ -2.22
PRP16YKR086W RMD8P43620 662 aa1.16□□□□□ -2.22
PRP16YKR086W CPR8P53728 308 aa1.16□□□□□ -2.22
PRP16YKR086W ERG13P54839 491 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W NSE5Q03718 556 aa1.16□□□□□ -2.22
PRP16YKR086W PEX15Q08215 383 aa1.16□□□□□ -2.22
PRP16YKR086W TIP41Q12199 356 aa1.16□□□□□ -2.22
PRP16YKR086W RPL7BQ12213 244 aaKnown RBP1.16□□□□□ -2.22
PRP16YKR086W ZPS1Q12512 249 aa1.16□□□□□ -2.22
PRP16YKR086W CPA2P03965 1118 aaKnown RBP1.15□□□□□ -2.22
PRP16YKR086W ICL1P28240 557 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W NAB3P38996 802 aaKnown RBP RIP-Chip data1.15□□□□□ -2.22not detected
PRP16YKR086W YFL015CP43578 164 aa1.15□□□□□ -2.22
PRP16YKR086W YNL234WP53857 426 aa1.15□□□□□ -2.22
PRP16YKR086W DUG3P53871 357 aa1.15□□□□□ -2.22
PRP16YKR086W RPL15BP54780 204 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W RSC9Q03124 581 aa1.15□□□□□ -2.22
PRP16YKR086W YDR415CQ04033 374 aaPredicted RBP1.15□□□□□ -2.22
PRP16YKR086W CRF1Q04930 467 aa1.15□□□□□ -2.22
PRP16YKR086W IRC3Q06683 689 aa1.15□□□□□ -2.22
PRP16YKR086W YLR049CQ12110 428 aa1.15□□□□□ -2.22
PRP16YKR086W ISA2Q12425 185 aa1.15□□□□□ -2.22
PRP16YKR086W SKM1Q12469 655 aa1.15□□□□□ -2.22
PRP16YKR086W YER175W-AQ8TGU4 54 aa1.15□□□□□ -2.22
PRP16YKR086W YLR302CO13544 120 aa1.15□□□□□ -2.23
PRP16YKR086W POL3P15436 1097 aa1.15□□□□□ -2.23
PRP16YKR086W SPO12P17123 173 aa1.15□□□□□ -2.23
PRP16YKR086W TGL1P34163 548 aa1.15□□□□□ -2.23
PRP16YKR086W TEF4P36008 412 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W ROT2P38138 954 aa1.15□□□□□ -2.23
PRP16YKR086W RRP3P38712 501 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W FLO5P38894 1075 aa1.15□□□□□ -2.23
PRP16YKR086W NOC2P39744 710 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W GPP2P40106 250 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W MAD2P40958 196 aa1.15□□□□□ -2.23
PRP16YKR086W YFR016CP43597 1233 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W NMD5P46970 1048 aa1.15□□□□□ -2.23
PRP16YKR086W PEF1P53238 335 aa1.15□□□□□ -2.23
PRP16YKR086W BUD17P53727 317 aa1.15□□□□□ -2.23
PRP16YKR086W SPN1Q06505 410 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W ECM30Q06673 1274 aa1.15□□□□□ -2.23
PRP16YKR086W YAP7Q08182 245 aa1.15□□□□□ -2.23
PRP16YKR086W YOL057WQ08225 711 aa1.15□□□□□ -2.23
PRP16YKR086W YOR378WQ08902 515 aa1.15□□□□□ -2.23
PRP16YKR086W DIN7Q12086 430 aa1.15□□□□□ -2.23
PRP16YKR086W GLE1Q12315 538 aa1.15□□□□□ -2.23
PRP16YKR086W ERG27Q12452 347 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
PRP16YKR086W CLB4P24871 460 aa1.15□□□□□ -2.23
PRP16YKR086W RRP43P25359 394 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W PLC1P32383 869 aa1.15□□□□□ -2.23
PRP16YKR086W APM3P38153 483 aa1.15□□□□□ -2.23
PRP16YKR086W ERC1P38767 581 aa1.15□□□□□ -2.23
PRP16YKR086W STL1P39932 569 aa1.15□□□□□ -2.23
PRP16YKR086W YIL161WP40449 235 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W PUS4P48567 403 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W STP1Q00947 519 aa1.15□□□□□ -2.23
PRP16YKR086W ARP9Q05123 467 aa1.15□□□□□ -2.23
PRP16YKR086W HRD3Q05787 833 aa1.15□□□□□ -2.23
PRP16YKR086W RTK1Q12100 620 aaPredicted RBP1.15□□□□□ -2.23
PRP16YKR086W YRA1Q12159 226 aaKnown RBP1.15□□□□□ -2.23
PRP16YKR086W RAD9P14737 1309 aa1.15□□□□□ -2.23
PRP16YKR086W ILS1P09436 1072 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W CDC15P27636 974 aa1.14□□□□□ -2.23
PRP16YKR086W RPN12P32496 274 aa1.14□□□□□ -2.23
PRP16YKR086W RPC34P32910 317 aa1.14□□□□□ -2.23
PRP16YKR086W YBL029WP38201 376 aa1.14□□□□□ -2.23
PRP16YKR086W YBR071WP38243 211 aa1.14□□□□□ -2.23
PRP16YKR086W SAP1P39955 897 aaKnown RBP1.14□□□□□ -2.23
PRP16YKR086W GAT1P43574 510 aa1.14□□□□□ -2.23
PRP16YKR086W NET1P47035 1189 aa1.14□□□□□ -2.23
PRP16YKR086W GLO1P50107 326 aa1.14□□□□□ -2.23
PRP16YKR086W MSS11Q03825 758 aa1.14□□□□□ -2.23
PRP16YKR086W SLX4Q12098 748 aa1.14□□□□□ -2.23
PRP16YKR086W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
PRP16YKR086W COX17Q12287 69 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms