RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W YER190C-BP0CX94 160 aa3.57□□□□□ -1.84
VMA5YKL080W YEL077W-AP0CX95 160 aa3.57□□□□□ -1.84
VMA5YKL080W YGR296C-BP0CX96 160 aa3.57□□□□□ -1.84
VMA5YKL080W YPL283W-BP0CX97 160 aa3.57□□□□□ -1.84
VMA5YKL080W YPR204C-AP0CX98 160 aa3.57□□□□□ -1.84
VMA5YKL080W MTF2P10849 440 aa3.57□□□□□ -1.84
VMA5YKL080W PFK2P16862 959 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
VMA5YKL080W SEC18P18759 758 aaKnown RBP3.57□□□□□ -1.84
VMA5YKL080W MGM1P32266 881 aa3.57□□□□□ -1.84
VMA5YKL080W NFU1P32860 256 aa3.57□□□□□ -1.84
VMA5YKL080W APM3P38153 483 aa3.57□□□□□ -1.84
VMA5YKL080W SPC97P38863 823 aa3.57□□□□□ -1.84
VMA5YKL080W ERV46P39727 415 aa3.57□□□□□ -1.84
VMA5YKL080W NDE1P40215 560 aa3.57□□□□□ -1.84
VMA5YKL080W CFD1P40558 293 aa3.57□□□□□ -1.84
VMA5YKL080W CEG1Q01159 459 aaPredicted RBP3.57□□□□□ -1.84
VMA5YKL080W HIM1Q06674 414 aa3.57□□□□□ -1.84
VMA5YKL080W IMH1Q06704 911 aaKnown RBP3.57□□□□□ -1.84
VMA5YKL080W YDR056CQ12025 205 aa3.57□□□□□ -1.84
VMA5YKL080W ICL2Q12031 575 aa3.57□□□□□ -1.84
VMA5YKL080W SCM3Q12334 223 aa3.57□□□□□ -1.84
VMA5YKL080W ENT1Q12518 454 aa3.57□□□□□ -1.84
VMA5YKL080W APA1P16550 321 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W YCL049CP25577 312 aa3.56□□□□□ -1.84
VMA5YKL080W CDC60P26637 1090 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W CMK1P27466 446 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W PXA2P34230 853 aa3.56□□□□□ -1.84
VMA5YKL080W VBA2P38358 474 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W YIR016WP40572 265 aa3.56□□□□□ -1.84
VMA5YKL080W VTC2P43585 828 aa3.56□□□□□ -1.84
VMA5YKL080W CPR6P53691 371 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W FCP1Q03254 732 aa3.56□□□□□ -1.84
VMA5YKL080W SXM1Q04175 944 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W MRPL1Q04599 285 aa3.56□□□□□ -1.84
VMA5YKL080W EIS1Q05050 843 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W CRD1Q07560 283 aa3.56□□□□□ -1.84
VMA5YKL080W SDH5Q08230 162 aa3.56□□□□□ -1.84
VMA5YKL080W LYS21Q12122 440 aaKnown RBP3.56□□□□□ -1.84
VMA5YKL080W NBP2Q12163 236 aa3.56□□□□□ -1.84
VMA5YKL080W SFI1Q12369 946 aa3.56□□□□□ -1.84
VMA5YKL080W SEM1O94742 89 aa3.55□□□□□ -1.84
VMA5YKL080W HSP82P02829 709 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W SES1P07284 462 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W UBC1P21734 215 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W MCM3P24279 971 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W PRP45P28004 379 aaPredicted RBP3.55□□□□□ -1.84
VMA5YKL080W NPL6P32832 435 aa3.55□□□□□ -1.84
VMA5YKL080W RPF2P36160 344 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W PXL1P36166 706 aa3.55□□□□□ -1.84
VMA5YKL080W UTP9P38882 575 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W MEP3P53390 489 aa3.55□□□□□ -1.84
VMA5YKL080W YAT1P80235 687 aa3.55□□□□□ -1.84
VMA5YKL080W RCF1Q03713 159 aa3.55□□□□□ -1.84
VMA5YKL080W ARA2Q04212 335 aa3.55□□□□□ -1.84
VMA5YKL080W ECM22Q05958 814 aaPredicted RBP3.55□□□□□ -1.84
VMA5YKL080W VIP1Q06685 1146 aaKnown RBP3.55□□□□□ -1.84
VMA5YKL080W IWR1Q07532 353 aaPredicted RBP3.55□□□□□ -1.84
VMA5YKL080W SNA4Q07549 140 aa3.55□□□□□ -1.84
VMA5YKL080W AAD4Q07747 329 aa3.55□□□□□ -1.84
VMA5YKL080W FUM1P08417 488 aaKnown RBP3.54□□□□□ -1.84
VMA5YKL080W RAD16P31244 790 aa3.54□□□□□ -1.84
VMA5YKL080W SWC3P31376 625 aa3.54□□□□□ -1.84
VMA5YKL080W NUP120P35729 1037 aa3.54□□□□□ -1.84
VMA5YKL080W PSF2P40359 213 aa3.54□□□□□ -1.84
VMA5YKL080W MAD3P47074 515 aa3.54□□□□□ -1.84
VMA5YKL080W NPA3P47122 385 aa3.54□□□□□ -1.84
VMA5YKL080W RBG2P53295 368 aaKnown RBP3.54□□□□□ -1.84
VMA5YKL080W RPL15BP54780 204 aaPredicted RBP3.54□□□□□ -1.84
VMA5YKL080W CIA1Q05583 330 aa3.54□□□□□ -1.84
VMA5YKL080W YLR287CQ05881 355 aa3.54□□□□□ -1.84
VMA5YKL080W CSR1Q06705 408 aaKnown RBP3.54□□□□□ -1.84
VMA5YKL080W COX1P00401 534 aa3.53□□□□□ -1.84
VMA5YKL080W BIK1P11709 440 aa3.53□□□□□ -1.84
VMA5YKL080W KGD2P19262 463 aaPredicted RBP3.53□□□□□ -1.84
VMA5YKL080W SIR1P21691 654 aa3.53□□□□□ -1.84
VMA5YKL080W CLB4P24871 460 aa3.53□□□□□ -1.84
VMA5YKL080W PGS1P25578 521 aa3.53□□□□□ -1.84
VMA5YKL080W PTC6P25646 442 aa3.53□□□□□ -1.84
VMA5YKL080W GSH1P32477 678 aa3.53□□□□□ -1.84
VMA5YKL080W SWI3P32591 825 aa3.53□□□□□ -1.84
VMA5YKL080W GND1P38720 489 aaKnown RBP3.53□□□□□ -1.84
VMA5YKL080W UBP7P40453 1071 aa3.53□□□□□ -1.84
VMA5YKL080W ARF3P40994 183 aaRIP-Chip data3.53□□□□□ -1.84not detected
VMA5YKL080W ERR3P42222 437 aa3.53□□□□□ -1.84
VMA5YKL080W LYS20P48570 428 aaKnown RBP3.53□□□□□ -1.84
VMA5YKL080W CTF18P49956 741 aa3.53□□□□□ -1.84
VMA5YKL080W ORC5P50874 479 aa3.53□□□□□ -1.84
VMA5YKL080W VPS9P54787 451 aa3.53□□□□□ -1.84
VMA5YKL080W YLR352WQ06479 807 aa3.53□□□□□ -1.84
VMA5YKL080W AIM6Q07716 390 aa3.53□□□□□ -1.84
VMA5YKL080W GRC3Q07845 632 aa3.53□□□□□ -1.84
VMA5YKL080W TAH18Q12181 623 aa3.53□□□□□ -1.84
VMA5YKL080W YCP4P25349 247 aaKnown RBP3.52□□□□□ -1.85
VMA5YKL080W MSS51P32335 436 aa3.52□□□□□ -1.85
VMA5YKL080W PAH1P32567 862 aa3.52□□□□□ -1.85
VMA5YKL080W TEF4P36008 412 aaKnown RBP3.52□□□□□ -1.85
VMA5YKL080W ERC1P38767 581 aa3.52□□□□□ -1.85
VMA5YKL080W FSH1P38777 243 aaKnown RBP3.52□□□□□ -1.85
VMA5YKL080W YER010CP40011 234 aa3.52□□□□□ -1.85
VMA5YKL080W PUG1P40100 303 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms