RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W SLG1P54867 378 aa5.4□□□□□ -1.54
RPB4YJL140W TIM8P57744 87 aa5.4□□□□□ -1.54
RPB4YJL140W RRB1Q04225 511 aaKnown RBP5.4□□□□□ -1.54
RPB4YJL140W SOV1Q04748 898 aa5.4□□□□□ -1.54
RPB4YJL140W SML1Q04964 104 aa5.4□□□□□ -1.54
RPB4YJL140W YPR078CQ06813 372 aa5.4□□□□□ -1.54
RPB4YJL140W SPE3Q12074 293 aaKnown RBP5.4□□□□□ -1.54
RPB4YJL140W SWM1Q12379 170 aa5.4□□□□□ -1.54
RPB4YJL140W TAD3Q9URQ3 322 aa5.4□□□□□ -1.54
RPB4YJL140W SEN1Q00416 2231 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W FMP27Q06179 2628 aa5.39□□□□□ -1.55
RPB4YJL140W HOM2P13663 365 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W PAP1P29468 568 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W RPD3P32561 433 aa5.39□□□□□ -1.55
RPB4YJL140W ECM32P32644 1121 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W OAR1P35731 278 aa5.39□□□□□ -1.55
RPB4YJL140W JNM1P36224 373 aa5.39□□□□□ -1.55
RPB4YJL140W DUG2P38149 878 aa5.39□□□□□ -1.55
RPB4YJL140W SET5P38890 526 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W YMR124WP39523 943 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W GYP8P43570 497 aa5.39□□□□□ -1.55
RPB4YJL140W NOP13P53883 403 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
RPB4YJL140W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
RPB4YJL140W GIR2Q03768 265 aaPredicted RBP5.39□□□□□ -1.55
RPB4YJL140W SNU56Q03782 492 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W CUR1Q06469 252 aa5.39□□□□□ -1.55
RPB4YJL140W CSR1Q06705 408 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W VAC14Q06708 880 aa5.39□□□□□ -1.55
RPB4YJL140W YLR040CQ07988 224 aa5.39□□□□□ -1.55
RPB4YJL140W SIL1Q08199 421 aa5.39□□□□□ -1.55
RPB4YJL140W YOL073CQ08232 322 aa5.39□□□□□ -1.55
RPB4YJL140W ENV7Q12003 364 aa5.39□□□□□ -1.55
RPB4YJL140W TAF10Q12030 206 aa5.39□□□□□ -1.55
RPB4YJL140W SLX4Q12098 748 aa5.39□□□□□ -1.55
RPB4YJL140W PDH1Q12428 516 aaKnown RBP5.39□□□□□ -1.55
RPB4YJL140W CTF3Q12748 733 aa5.39□□□□□ -1.55
RPB4YJL140W IRA2P19158 3079 aa5.39□□□□□ -1.55
RPB4YJL140W NUM1Q00402 2748 aa5.39□□□□□ -1.55
RPB4YJL140W CET1O13297 549 aaPredicted RBP5.38□□□□□ -1.55
RPB4YJL140W PET111P08468 800 aa5.38□□□□□ -1.55
RPB4YJL140W ASP3-2P0CX77 362 aa5.38□□□□□ -1.55
RPB4YJL140W ASP3-3P0CX78 362 aa5.38□□□□□ -1.55
RPB4YJL140W ASP3-4P0CX79 362 aa5.38□□□□□ -1.55
RPB4YJL140W ASP3-1P0CZ17 362 aa5.38□□□□□ -1.55
RPB4YJL140W MUD1P32605 298 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W TCD1P38756 429 aa5.38□□□□□ -1.55
RPB4YJL140W YHR054CP38780 354 aa5.38□□□□□ -1.55
RPB4YJL140W SMC2P38989 1170 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W NDC80P40460 691 aa5.38□□□□□ -1.55
RPB4YJL140W UBP6P43593 499 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W POL31P46957 487 aa5.38□□□□□ -1.55
RPB4YJL140W PUS2P53167 370 aa5.38□□□□□ -1.55
RPB4YJL140W NOG2P53742 486 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W YNR061CP53747 219 aa5.38□□□□□ -1.55
RPB4YJL140W RNT1Q02555 471 aa5.38□□□□□ -1.55
RPB4YJL140W SLU7Q02775 382 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W NGL3Q03210 505 aa5.38□□□□□ -1.55
RPB4YJL140W VPS60Q03390 229 aa5.38□□□□□ -1.55
RPB4YJL140W GIS1Q03833 894 aa5.38□□□□□ -1.55
RPB4YJL140W UTP14Q04500 899 aaKnown RBP5.38□□□□□ -1.55
RPB4YJL140W YLR297WQ05899 129 aa5.38□□□□□ -1.55
RPB4YJL140W HRT3Q12347 344 aa5.38□□□□□ -1.55
RPB4YJL140W ERG11P10614 530 aa5.37□□□□□ -1.55
RPB4YJL140W SIR1P21691 654 aa5.37□□□□□ -1.55
RPB4YJL140W HXT1P32465 570 aa5.37□□□□□ -1.55
RPB4YJL140W CTF13P35203 478 aa5.37□□□□□ -1.55
RPB4YJL140W TRZ1P36159 838 aaPredicted RBP5.37□□□□□ -1.55
RPB4YJL140W MOH1P38191 138 aa5.37□□□□□ -1.55
RPB4YJL140W SHE3P38272 425 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W YHR078WP38799 552 aa5.37□□□□□ -1.55
RPB4YJL140W SFB3P38810 929 aa5.37□□□□□ -1.55
RPB4YJL140W SMF1P38925 575 aa5.37□□□□□ -1.55
RPB4YJL140W TIM54P47045 478 aa5.37□□□□□ -1.55
RPB4YJL140W VPS25P47142 202 aa5.37□□□□□ -1.55
RPB4YJL140W TCB2P48231 1178 aa5.37□□□□□ -1.55
RPB4YJL140W HSH155P49955 971 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W IMP4P53941 290 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W DIG1Q03063 452 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W TMN2Q04562 672 aa5.37□□□□□ -1.55
RPB4YJL140W CDD1Q06549 142 aa5.37□□□□□ -1.55
RPB4YJL140W OPY2Q06810 360 aa5.37□□□□□ -1.55
RPB4YJL140W CDC53Q12018 815 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W SGT2Q12118 346 aaKnown RBP5.37□□□□□ -1.55
RPB4YJL140W MSB2P32334 1306 aa5.37□□□□□ -1.55
RPB4YJL140W LAA1P39526 2014 aa5.36□□□□□ -1.55
RPB4YJL140W BEM2P39960 2167 aaKnown RBP5.36□□□□□ -1.55
RPB4YJL140W GFA1P14742 717 aaKnown RBP5.36□□□□□ -1.55
RPB4YJL140W CKI1P20485 582 aa5.36□□□□□ -1.55
RPB4YJL140W MSH2P25847 964 aa5.36□□□□□ -1.55
RPB4YJL140W DPB3P27344 201 aa5.36□□□□□ -1.55
RPB4YJL140W GGA2P38817 585 aaKnown RBP5.36□□□□□ -1.55
RPB4YJL140W BTT1P40314 149 aaPredicted RBP5.36□□□□□ -1.55
RPB4YJL140W SDS3P40505 327 aa5.36□□□□□ -1.55
RPB4YJL140W CHS6P40955 746 aa5.36□□□□□ -1.55
RPB4YJL140W DAM1P53267 343 aa5.36□□□□□ -1.55
RPB4YJL140W HER2Q03557 464 aa5.36□□□□□ -1.55
RPB4YJL140W CEF1Q03654 590 aaPredicted RBP5.36□□□□□ -1.55
RPB4YJL140W PRM6Q04705 352 aa5.36□□□□□ -1.55
RPB4YJL140W DON1Q05610 365 aa5.36□□□□□ -1.55
RPB4YJL140W ATG23Q06671 453 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms