RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	RFA2	P26754	273 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	MSS51	P32335	436 aa		2.59	□□□□□ -2
NUP82	YJL061W	GSH1	P32477	678 aa		2.59	□□□□□ -2
NUP82	YJL061W	CNS1	P33313	385 aa		2.59	□□□□□ -2
NUP82	YJL061W	SLC1	P33333	303 aa		2.59	□□□□□ -2
NUP82	YJL061W	IMD2	P38697	523 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	KAP123	P40069	1113 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	ASG1	P40467	964 aa		2.59	□□□□□ -2
NUP82	YJL061W	CIN1	P40987	1014 aa		2.59	□□□□□ -2
NUP82	YJL061W	PSA1	P41940	361 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	BNA3	P47039	444 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	IMD3	P50095	523 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	ORC5	P50874	479 aa		2.59	□□□□□ -2
NUP82	YJL061W	RSC9	Q03124	581 aa		2.59	□□□□□ -2
NUP82	YJL061W	TY2A-DR2	Q03483	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	TY2A-B	Q12260	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	TY2A-OR2	Q12293	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	TY2A-DR1	Q12392	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	TY2A-OR1	Q12439	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	ERG27	Q12452	347 aa	Known RBP	2.59	□□□□□ -2
NUP82	YJL061W	TY2A-DR3	Q99303	438 aa		2.59	□□□□□ -2
NUP82	YJL061W	TFC3	P34111	1160 aa		2.58	□□□□□ -2
NUP82	YJL061W	PSP1	P50896	841 aa	Known RBP	2.58	□□□□□ -2
NUP82	YJL061W	VID22	Q05934	901 aa		2.58	□□□□□ -2
NUP82	YJL061W	TFC6	Q06339	672 aa		2.58	□□□□□ -2
NUP82	YJL061W	SUI3	P09064	285 aa	Known RBP	2.57	□□□□□ -2
NUP82	YJL061W	COQ3	P27680	312 aa		2.57	□□□□□ -2
NUP82	YJL061W	RIC1	P40395	1056 aa		2.57	□□□□□ -2
NUP82	YJL061W	NET1	P47035	1189 aa		2.57	□□□□□ -2
NUP82	YJL061W	ADE16	P54113	591 aa	Known RBP	2.57	□□□□□ -2
NUP82	YJL061W	YML131W	Q03102	365 aa		2.57	□□□□□ -2
NUP82	YJL061W	SWA2	Q06677	668 aa		2.57	□□□□□ -2
NUP82	YJL061W	TMA16	Q08687	178 aa		2.57	□□□□□ -2
NUP82	YJL061W	PCD1	Q12524	340 aa		2.57	□□□□□ -2
NUP82	YJL061W	YLR302C	O13544	120 aa		2.57	□□□□□ -2
NUP82	YJL061W	CDC15	P27636	974 aa		2.57	□□□□□ -2
NUP82	YJL061W	ERV46	P39727	415 aa		2.57	□□□□□ -2
NUP82	YJL061W	UBP7	P40453	1071 aa		2.57	□□□□□ -2
NUP82	YJL061W	STP1	Q00947	519 aa		2.57	□□□□□ -2
NUP82	YJL061W	GET3	Q12154	354 aa	Known RBP	2.57	□□□□□ -2
NUP82	YJL061W	CRC1	Q12289	327 aa		2.57	□□□□□ -2
NUP82	YJL061W	SNF1	P06782	633 aa	Known RBP	2.56	□□□□□ -2
NUP82	YJL061W	GEX2	P36173	615 aa		2.56	□□□□□ -2
NUP82	YJL061W	BNA1	P47096	177 aa		2.56	□□□□□ -2
NUP82	YJL061W	RRT6	P53117	311 aa	Predicted RBP	2.56	□□□□□ -2
NUP82	YJL061W	CRN1	Q06440	651 aa		2.56	□□□□□ -2
NUP82	YJL061W	NEW1	Q08972	1196 aa	Known RBP	2.56	□□□□□ -2
NUP82	YJL061W	NBP2	Q12163	236 aa		2.56	□□□□□ -2
NUP82	YJL061W	YMR085W	P0CF18	432 aa		2.56	□□□□□ -2
NUP82	YJL061W	MRP2	P10663	115 aa	Predicted RBP	2.56	□□□□□ -2
NUP82	YJL061W	PCT1	P13259	424 aa		2.56	□□□□□ -2
NUP82	YJL061W	YAP1	P19880	650 aa	Known RBP	2.56	□□□□□ -2
NUP82	YJL061W	RER1	P25560	188 aa		2.56	□□□□□ -2
NUP82	YJL061W	SSH4	P32343	579 aa		2.56	□□□□□ -2
NUP82	YJL061W	SRB5	P32585	307 aa		2.56	□□□□□ -2
NUP82	YJL061W	LHS1	P36016	881 aa		2.56	□□□□□ -2
NUP82	YJL061W	RRN3	P36070	627 aa		2.56	□□□□□ -2
NUP82	YJL061W	ARN1	P38731	627 aa		2.56	□□□□□ -2
NUP82	YJL061W	MRX1	P40050	688 aa		2.56	□□□□□ -2
NUP82	YJL061W	PFK26	P40433	827 aa	Known RBP	2.56	□□□□□ -2
NUP82	YJL061W	CFD1	P40558	293 aa		2.56	□□□□□ -2
NUP82	YJL061W	VPS4	P52917	437 aa		2.56	□□□□□ -2
NUP82	YJL061W	YPR003C	P53394	754 aa		2.56	□□□□□ -2
NUP82	YJL061W	REG1	Q00816	1014 aa		2.56	□□□□□ -2
NUP82	YJL061W	FCP1	Q03254	732 aa		2.56	□□□□□ -2
NUP82	YJL061W	SSP2	Q08646	371 aa		2.56	□□□□□ -2
NUP82	YJL061W	TRM8	Q12009	286 aa		2.56	□□□□□ -2
NUP82	YJL061W	NUS1	Q12063	375 aa		2.56	□□□□□ -2
NUP82	YJL061W	YSP3	P25036	478 aa		2.55	□□□□□ -2
NUP82	YJL061W	SOF1	P33750	489 aa	Known RBP	2.55	□□□□□ -2
NUP82	YJL061W	YER010C	P40011	234 aa		2.55	□□□□□ -2
NUP82	YJL061W	JHD1	P40034	492 aa		2.55	□□□□□ -2
NUP82	YJL061W	MNT3	P40549	630 aa		2.55	□□□□□ -2
NUP82	YJL061W	YJL107C	P42947	387 aa		2.55	□□□□□ -2
NUP82	YJL061W	COP1	P53622	1201 aa	Known RBP	2.55	□□□□□ -2
NUP82	YJL061W	YMR018W	Q04364	514 aa		2.55	□□□□□ -2
NUP82	YJL061W	PDR8	Q06149	701 aa		2.55	□□□□□ -2
NUP82	YJL061W	OPY2	Q06810	360 aa		2.55	□□□□□ -2
NUP82	YJL061W	AFT2	Q08957	416 aa		2.55	□□□□□ -2
NUP82	YJL061W	VCX1	Q99385	411 aa		2.55	□□□□□ -2
NUP82	YJL061W	GUK1	P15454	187 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	OCT1	P35999	772 aa		2.54	□□□□□ -2
NUP82	YJL061W	NTR2	P36118	322 aa	Predicted RBP	2.54	□□□□□ -2
NUP82	YJL061W	AAP1	P37898	856 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	AXL2	P38928	823 aa		2.54	□□□□□ -2
NUP82	YJL061W	SEC31	P38968	1273 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	TPA1	P40032	644 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	YIL024C	P40543	189 aa		2.54	□□□□□ -2
NUP82	YJL061W	CDC1	P40986	491 aa		2.54	□□□□□ -2
NUP82	YJL061W	VTC3	Q02725	835 aa		2.54	□□□□□ -2
NUP82	YJL061W	RCO1	Q04779	684 aa		2.54	□□□□□ -2
NUP82	YJL061W	MCH4	Q08268	501 aa		2.54	□□□□□ -2
NUP82	YJL061W	PFA4	Q12006	378 aa		2.54	□□□□□ -2
NUP82	YJL061W	YLR049C	Q12110	428 aa		2.54	□□□□□ -2
NUP82	YJL061W	SRP54	P20424	541 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	ERG8	P24521	451 aa		2.54	□□□□□ -2
NUP82	YJL061W	ADE17	P38009	592 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	TOM71	P38825	639 aa	Known RBP	2.54	□□□□□ -2
NUP82	YJL061W	UBP8	P50102	471 aa		2.54	□□□□□ -2
NUP82	YJL061W	RRI1	Q12468	440 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms