RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	NPA3	P47122	385 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	ASE1	P50275	885 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	VPS73	P53142	486 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	RBG2	P53295	368 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	UBP16	Q02863	499 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	RAD30	Q04049	632 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	MRI1	Q06489	411 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	YDL242W	Q07746	117 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	RIX7	Q07844	837 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	LCB4	Q12246	624 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	SKM1	Q12469	655 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	YOR019W	Q99248	730 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	DNA2	P38859	1522 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	MLP2	P40457	1679 aa		4.09	□□□□□ -1.76
YPT35	YHR105W	MRP7	P12687	371 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	PDE1	P22434	369 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	LRE1	P25579	583 aa	Known RBP	4.08	□□□□□ -1.76
YPT35	YHR105W	SNQ2	P32568	1501 aa	Known RBP	4.08	□□□□□ -1.76
YPT35	YHR105W	SPT7	P35177	1332 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	YPT53	P36019	220 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	GMH1	P36125	273 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	BDH2	P39713	417 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	THI6	P41835	540 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	RMD8	P43620	662 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	DSD1	P53095	428 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	MUB1	Q03162	620 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	NGL2	Q03264	515 aa	Known RBP	4.08	□□□□□ -1.76
YPT35	YHR105W	TAF11	Q04226	346 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	SWT1	Q12104	458 aa		4.08	□□□□□ -1.76
YPT35	YHR105W	BUD4	P47136	1447 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	COX1	P00401	534 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	AAC1	P04710	309 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	CHO2	P05374	869 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	CDC24	P11433	854 aa	Predicted RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	KGD2	P19262	463 aa	Predicted RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	RNR3	P21672	869 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	RRP43	P25359	394 aa	Predicted RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	SAC6	P32599	642 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	NUP120	P35729	1037 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	JHD1	P40034	492 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	PFK26	P40433	827 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	YIL161W	P40449	235 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	SKP2	P42843	763 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	AAD10	P47182	288 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	MRX6	P48564	524 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	YML053C	Q04978	212 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	ERP4	Q12450	207 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	PGA3	Q12746	312 aa	Known RBP	4.07	□□□□□ -1.76
YPT35	YHR105W	YOR111W	Q99210	232 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	AI5_ALPHA	Q9ZZX1	630 aa		4.07	□□□□□ -1.76
YPT35	YHR105W	PDR10	P51533	1564 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	CPA2	P03965	1118 aa	Known RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	ARG3	P05150	338 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	PCT1	P13259	424 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	CDC43	P18898	376 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	YCK1	P23291	538 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	SRB5	P32585	307 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	LOT5	P34234	306 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	SEC24	P40482	926 aa	Known RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	SWP82	P43554	623 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	SGM1	P47166	707 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	LYS4	P49367	693 aa	Predicted RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	YGL117W	P53133	265 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	YGL036W	P53185	909 aa	Predicted RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	YGR250C	P53316	781 aa	Known RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	COQ6	P53318	479 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	VPS75	P53853	264 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	RAD33	Q04231	177 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	GPN2	Q08726	347 aa	Predicted RBP	4.06	□□□□□ -1.76
YPT35	YHR105W	TGS1	Q12052	315 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	YBR126W-A	Q8TGU7	68 aa		4.06	□□□□□ -1.76
YPT35	YHR105W	SPO16	P17122	198 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	SWC3	P31376	625 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	SAP1	P39955	897 aa	Known RBP	4.05	□□□□□ -1.76
YPT35	YHR105W	SLZ1	P40167	298 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	IME4	P41833	600 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	MSY1	P48527	492 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	ASN1	P49089	572 aa	Known RBP	4.05	□□□□□ -1.76
YPT35	YHR105W	MRPL19	P53875	158 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	YML122C	Q03207	126 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	UTP21	Q06078	939 aa	Predicted RBP	4.05	□□□□□ -1.76
YPT35	YHR105W	NBP2	Q12163	236 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	SPE4	Q12455	300 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	ZPS1	Q12512	249 aa		4.05	□□□□□ -1.76
YPT35	YHR105W	TPK2	P06245	380 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	WHI2	P12611	486 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	SRP54	P20424	541 aa	Known RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	DMC1	P25453	334 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	YJU2	P28320	278 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	HES1	P35843	434 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	KTR3	P38130	404 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	PIH1	P38768	344 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	MTG2	P38860	518 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	LNP1	P38878	278 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	MAM1	P40065	302 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	UBP7	P40453	1071 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	YFL015C	P43578	164 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	VTC2	P43585	828 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms