RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C TUM1Q08686 304 aaKnown RBP5.74□□□□□ -1.49
SFB3YHR098C RAX1Q08760 435 aa5.74□□□□□ -1.49
SFB3YHR098C LDB17Q12342 491 aa5.74□□□□□ -1.49
SFB3YHR098C DPH6Q12429 685 aa5.74□□□□□ -1.49
SFB3YHR098C FMP16Q12497 93 aa5.74□□□□□ -1.49
SFB3YHR098C SST2P11972 698 aaKnown RBP5.74□□□□□ -1.49
SFB3YHR098C GRX2P17695 143 aaKnown RBP5.74□□□□□ -1.49
SFB3YHR098C RPL8BP29453 256 aaKnown RBP5.74□□□□□ -1.49
SFB3YHR098C MDJ1P35191 511 aa5.74□□□□□ -1.49
SFB3YHR098C YJR061WP40355 935 aa5.74□□□□□ -1.49
SFB3YHR098C NIT1P40447 199 aa5.74□□□□□ -1.49
SFB3YHR098C YRB2P40517 327 aa5.74□□□□□ -1.49
SFB3YHR098C TIM54P47045 478 aa5.74□□□□□ -1.49
SFB3YHR098C MET13P53128 600 aa5.74□□□□□ -1.49
SFB3YHR098C IPI3P53877 555 aa5.74□□□□□ -1.49
SFB3YHR098C YMR099CQ03161 297 aaKnown RBP5.74□□□□□ -1.49
SFB3YHR098C YET3Q07451 203 aa5.74□□□□□ -1.49
SFB3YHR098C YLR031WQ07978 186 aa5.74□□□□□ -1.49
SFB3YHR098C AI4P03878 556 aa5.73□□□□□ -1.49
SFB3YHR098C RAD18P10862 487 aa5.73□□□□□ -1.49
SFB3YHR098C CBS2P14905 389 aa5.73□□□□□ -1.49
SFB3YHR098C CYS4P32582 507 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C SLX5P32828 619 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C SEA4P38164 1038 aa5.73□□□□□ -1.49
SFB3YHR098C HSE1P38753 452 aa5.73□□□□□ -1.49
SFB3YHR098C YER156CP40093 338 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C ORC5P50874 479 aa5.73□□□□□ -1.49
SFB3YHR098C PIP2P52960 996 aa5.73□□□□□ -1.49
SFB3YHR098C NOP19P53317 196 aaPredicted RBP5.73□□□□□ -1.49
SFB3YHR098C COG5P53951 403 aa5.73□□□□□ -1.49
SFB3YHR098C ARX1Q03862 593 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C DLT1Q04216 342 aa5.73□□□□□ -1.49
SFB3YHR098C EMI2Q04409 500 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C UFO1Q04511 668 aa5.73□□□□□ -1.49
SFB3YHR098C YPR196WQ06595 470 aa5.73□□□□□ -1.49
SFB3YHR098C ACF2Q12168 779 aa5.73□□□□□ -1.49
SFB3YHR098C PSY3Q12318 242 aa5.73□□□□□ -1.49
SFB3YHR098C GRX6Q12438 231 aa5.73□□□□□ -1.49
SFB3YHR098C YOR131CQ12486 218 aa5.73□□□□□ -1.49
SFB3YHR098C RKM4Q12504 494 aa5.73□□□□□ -1.49
SFB3YHR098C RAD10P06838 210 aa5.73□□□□□ -1.49
SFB3YHR098C NFT1P0CE68 1218 aa5.73□□□□□ -1.49
SFB3YHR098C HEM13P11353 328 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C CMK2P22517 447 aa5.73□□□□□ -1.49
SFB3YHR098C SAC1P32368 623 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C IMP3P32899 183 aaPredicted RBP5.73□□□□□ -1.49
SFB3YHR098C MTC2P34246 357 aa5.73□□□□□ -1.49
SFB3YHR098C GLY1P37303 387 aaKnown RBP5.73□□□□□ -1.49
SFB3YHR098C SOH1P38633 127 aa5.73□□□□□ -1.49
SFB3YHR098C YHR078WP38799 552 aa5.73□□□□□ -1.49
SFB3YHR098C NDE1P40215 560 aa5.73□□□□□ -1.49
SFB3YHR098C ASG1P40467 964 aa5.73□□□□□ -1.49
SFB3YHR098C FAR3P46671 204 aa5.73□□□□□ -1.49
SFB3YHR098C SDH1Q00711 640 aa5.73□□□□□ -1.49
SFB3YHR098C RSC9Q03124 581 aa5.73□□□□□ -1.49
SFB3YHR098C DYN3Q04949 312 aa5.73□□□□□ -1.49
SFB3YHR098C AAD15Q08361 143 aa5.73□□□□□ -1.49
SFB3YHR098C HRT3Q12347 344 aa5.73□□□□□ -1.49
SFB3YHR098C AEP2P22136 580 aa5.72□□□□□ -1.49
SFB3YHR098C POL4P25615 582 aa5.72□□□□□ -1.49
SFB3YHR098C ACP1P32463 125 aa5.72□□□□□ -1.49
SFB3YHR098C RFS1P38234 210 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C YBR184WP38299 523 aa5.72□□□□□ -1.49
SFB3YHR098C MEF2P39677 819 aa5.72□□□□□ -1.49
SFB3YHR098C PSF2P40359 213 aa5.72□□□□□ -1.49
SFB3YHR098C YGR210CP42942 411 aa5.72□□□□□ -1.49
SFB3YHR098C YFH7P43591 353 aa5.72□□□□□ -1.49
SFB3YHR098C RTT101P47050 842 aa5.72□□□□□ -1.49
SFB3YHR098C CWC23P52868 283 aaPredicted RBP5.72□□□□□ -1.49
SFB3YHR098C CDC55Q00362 526 aa5.72□□□□□ -1.49
SFB3YHR098C MED2Q12124 431 aa5.72□□□□□ -1.49
SFB3YHR098C GTT2Q12390 233 aa5.72□□□□□ -1.49
SFB3YHR098C URA3P03962 267 aa5.72□□□□□ -1.49
SFB3YHR098C RAP1P11938 827 aa5.72□□□□□ -1.49
SFB3YHR098C CKA2P19454 339 aa5.72□□□□□ -1.49
SFB3YHR098C PEX6P33760 1030 aa5.72□□□□□ -1.49
SFB3YHR098C HXT5P38695 592 aa5.72□□□□□ -1.49
SFB3YHR098C HER2Q03557 464 aa5.72□□□□□ -1.49
SFB3YHR098C ADE13Q05911 482 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C VPS36Q06696 566 aa5.72□□□□□ -1.49
SFB3YHR098C MDM36Q06820 579 aa5.72□□□□□ -1.49
SFB3YHR098C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SFB3YHR098C RRP36Q12481 300 aaPredicted RBP5.72□□□□□ -1.49
SFB3YHR098C CDC31P06704 161 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C RPB4P20433 221 aaPredicted RBP5.72□□□□□ -1.49
SFB3YHR098C PHO84P25297 587 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C OCA4P25366 362 aa5.72□□□□□ -1.49
SFB3YHR098C VMA6P32366 345 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C NGR1P32831 672 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C DDI1P40087 428 aa5.72□□□□□ -1.49
SFB3YHR098C MEP1P40260 492 aa5.72□□□□□ -1.49
SFB3YHR098C NOG2P53742 486 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C TMA7Q3E764 64 aaKnown RBP5.72□□□□□ -1.49
SFB3YHR098C COBP00163 385 aa5.71□□□□□ -1.5
SFB3YHR098C BI2P03873 423 aa5.71□□□□□ -1.5
SFB3YHR098C ADE5,7P07244 802 aaKnown RBP5.71□□□□□ -1.5
SFB3YHR098C SFL1P20134 766 aa5.71□□□□□ -1.5
SFB3YHR098C ADP1P25371 1049 aa5.71□□□□□ -1.5
SFB3YHR098C SPB1P25582 841 aaPredicted RBP5.71□□□□□ -1.5
SFB3YHR098C PRP45P28004 379 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 104 ms