RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	RFA2	P26754	273 aa	Known RBP	4.21	□□□□□ -1.74
SPO11	YHL022C	YBR138C	P38277	524 aa		4.21	□□□□□ -1.74
SPO11	YHL022C	TPA1	P40032	644 aa	Known RBP	4.21	□□□□□ -1.74
SPO11	YHL022C	IMA1	P53051	589 aa		4.21	□□□□□ -1.74
SPO11	YHL022C	ADE16	P54113	591 aa	Known RBP	4.21	□□□□□ -1.74
SPO11	YHL022C	DSE3	Q08729	430 aa		4.21	□□□□□ -1.74
SPO11	YHL022C	YER145C-A	A0A023PYF4	145 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	GCS1	P35197	352 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	ARC40	P38328	384 aa	Known RBP	4.2	□□□□□ -1.74
SPO11	YHL022C	EAF7	P53911	425 aa	Known RBP	4.2	□□□□□ -1.74
SPO11	YHL022C	MTG1	Q03151	367 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO11	YHL022C	MLH2	Q07980	695 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	GSH2	Q08220	491 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	MCH4	Q08268	501 aa		4.2	□□□□□ -1.74
SPO11	YHL022C	MIS1	P09440	975 aa	Known RBP	4.19	□□□□□ -1.74
SPO11	YHL022C	YML003W	P0CF16	290 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	BIK1	P11709	440 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	YCR006C	P25350	157 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	MSH1	P25846	959 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	PTP2	P29461	750 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	SKP2	P42843	763 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	ZAP1	P47043	880 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	TAN1	P53072	289 aa	Predicted RBP	4.19	□□□□□ -1.74
SPO11	YHL022C	PIG1	Q06216	648 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	FRE3	Q08905	711 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	YLR112W	Q12130	139 aa		4.19	□□□□□ -1.74
SPO11	YHL022C	GPA1	P08539	472 aa		4.18	□□□□□ -1.74
SPO11	YHL022C	SUI3	P09064	285 aa	Known RBP	4.18	□□□□□ -1.74
SPO11	YHL022C	YSP3	P25036	478 aa		4.18	□□□□□ -1.74
SPO11	YHL022C	GCD7	P32502	381 aa	Predicted RBP	4.18	□□□□□ -1.74
SPO11	YHL022C	PUG1	P40100	303 aa		4.18	□□□□□ -1.74
SPO11	YHL022C	TES1	P41903	349 aa	Known RBP	4.18	□□□□□ -1.74
SPO11	YHL022C	YFL068W	P0CX99	160 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	YLL066W-A	P0CY00	160 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	YLL067W-A	P0CY01	160 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	FSH1	P38777	243 aa	Known RBP	4.17	□□□□□ -1.74
SPO11	YHL022C	DJP1	P40564	432 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	MAF1	P41910	395 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	VPS25	P47142	202 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	BAG7	Q12128	409 aa		4.17	□□□□□ -1.74
SPO11	YHL022C	CLB4	P24871	460 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	YHL041W	P38730	149 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	MET30	P39014	640 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	VPS27	P40343	622 aa	Known RBP	4.16	□□□□□ -1.74
SPO11	YHL022C	ERR3	P42222	437 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	IZH1	Q03419	316 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	NDD1	Q08887	554 aa		4.16	□□□□□ -1.74
SPO11	YHL022C	LRE1	P25579	583 aa	Known RBP	4.15	□□□□□ -1.75
SPO11	YHL022C	EXO84	P38261	753 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	PHM8	P40025	321 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	YIL169C	P40442	995 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	UBP8	P50102	471 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	DIG1	Q03063	452 aa	Known RBP	4.15	□□□□□ -1.75
SPO11	YHL022C	TRS130	Q03660	1102 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	ECM16	Q04217	1267 aa	Known RBP	4.15	□□□□□ -1.75
SPO11	YHL022C	ATG23	Q06671	453 aa		4.15	□□□□□ -1.75
SPO11	YHL022C	NEW1	Q08972	1196 aa	Known RBP	4.15	□□□□□ -1.75
SPO11	YHL022C	ATP4	P05626	244 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	MRP2	P10663	115 aa	Predicted RBP	4.14	□□□□□ -1.75
SPO11	YHL022C	GEX2	P36173	615 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	ADE17	P38009	592 aa	Known RBP	4.14	□□□□□ -1.75
SPO11	YHL022C	UBP13	P38187	747 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	ASG1	P40467	964 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	CAC2	Q04199	468 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	SWF1	Q04629	336 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	YLR455W	Q06188	304 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	NYV1	Q12255	253 aa		4.14	□□□□□ -1.75
SPO11	YHL022C	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
SPO11	YHL022C	NCP1	P16603	691 aa	Known RBP	4.13	□□□□□ -1.75
SPO11	YHL022C	MNN2	P38069	597 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	YAT2	P40017	923 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	SWA2	Q06677	668 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	POS5	Q06892	414 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	VAM6	Q07468	1049 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	SWT1	Q12104	458 aa		4.13	□□□□□ -1.75
SPO11	YHL022C	RRP6	Q12149	733 aa	Known RBP	4.13	□□□□□ -1.75
SPO11	YHL022C	RPT2	P40327	437 aa	Known RBP	4.12	□□□□□ -1.75
SPO11	YHL022C	NRT1	Q08485	598 aa		4.12	□□□□□ -1.75
SPO11	YHL022C	YLR049C	Q12110	428 aa		4.12	□□□□□ -1.75
SPO11	YHL022C	ATP2	P00830	511 aa	Known RBP	4.11	□□□□□ -1.75
SPO11	YHL022C	CHO1	P08456	276 aa		4.11	□□□□□ -1.75
SPO11	YHL022C	PCL6	P40038	420 aa		4.11	□□□□□ -1.75
SPO11	YHL022C	ESBP6	P53918	673 aa		4.11	□□□□□ -1.75
SPO11	YHL022C	BET4	Q00618	327 aa		4.11	□□□□□ -1.75
SPO11	YHL022C	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
SPO11	YHL022C	APA1	P16550	321 aa	Known RBP	4.1	□□□□□ -1.75
SPO11	YHL022C	SRP54	P20424	541 aa	Known RBP	4.1	□□□□□ -1.75
SPO11	YHL022C	RGT1	P32862	1170 aa		4.1	□□□□□ -1.75
SPO11	YHL022C	YIL161W	P40449	235 aa	Known RBP	4.1	□□□□□ -1.75
SPO11	YHL022C	DCP2	P53550	970 aa	Known RBP	4.1	□□□□□ -1.75
SPO11	YHL022C	ASI1	P54074	624 aa		4.1	□□□□□ -1.75
SPO11	YHL022C	PFA5	Q03289	374 aa		4.1	□□□□□ -1.75
SPO11	YHL022C	CBP1	P07252	654 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	PET111	P08468	800 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	PHO81	P17442	1178 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	LEU5	P38702	357 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	YND1	P40009	630 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	CRN1	Q06440	651 aa		4.09	□□□□□ -1.75
SPO11	YHL022C	COX17	Q12287	69 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms