RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YCR006CP25350 157 aa3.51□□□□□ -1.85
VMA21YGR105W ATO2P32907 282 aa3.51□□□□□ -1.85
VMA21YGR105W OCT1P35999 772 aa3.51□□□□□ -1.85
VMA21YGR105W VPS41P38959 992 aa3.51□□□□□ -1.85
VMA21YGR105W PUG1P40100 303 aa3.51□□□□□ -1.85
VMA21YGR105W VPS27P40343 622 aaKnown RBP3.51□□□□□ -1.85
VMA21YGR105W ZAP1P47043 880 aa3.51□□□□□ -1.85
VMA21YGR105W LSC1P53598 329 aaKnown RBP3.51□□□□□ -1.85
VMA21YGR105W MCH4Q08268 501 aa3.51□□□□□ -1.85
VMA21YGR105W UBX3Q12229 455 aa3.51□□□□□ -1.85
VMA21YGR105W SUI3P09064 285 aaKnown RBP3.5□□□□□ -1.85
VMA21YGR105W YML003WP0CF16 290 aa3.5□□□□□ -1.85
VMA21YGR105W CLB4P24871 460 aa3.5□□□□□ -1.85
VMA21YGR105W FSH1P38777 243 aaKnown RBP3.5□□□□□ -1.85
VMA21YGR105W TPA1P40032 644 aaKnown RBP3.5□□□□□ -1.85
VMA21YGR105W YGL036WP53185 909 aaPredicted RBP3.5□□□□□ -1.85
VMA21YGR105W BOP3P53958 396 aa3.5□□□□□ -1.85
VMA21YGR105W SRL1Q08673 210 aa3.5□□□□□ -1.85
VMA21YGR105W RRP6Q12149 733 aaKnown RBP3.5□□□□□ -1.85
VMA21YGR105W YER145C-AA0A023PYF4 145 aa3.49□□□□□ -1.85
VMA21YGR105W RPL42AP0CX27 106 aaKnown RBP3.49□□□□□ -1.85
VMA21YGR105W RPL42BP0CX28 106 aaKnown RBP3.49□□□□□ -1.85
VMA21YGR105W PCT1P13259 424 aa3.49□□□□□ -1.85
VMA21YGR105W YSP3P25036 478 aa3.49□□□□□ -1.85
VMA21YGR105W YIL152WP40455 235 aa3.49□□□□□ -1.85
VMA21YGR105W DJP1P40564 432 aa3.49□□□□□ -1.85
VMA21YGR105W ERR3P42222 437 aa3.49□□□□□ -1.85
VMA21YGR105W STB2P46679 850 aa3.49□□□□□ -1.85
VMA21YGR105W TRS130Q03660 1102 aa3.49□□□□□ -1.85
VMA21YGR105W NUP53Q03790 475 aa3.49□□□□□ -1.85
VMA21YGR105W YMR034CQ05131 434 aaPredicted RBP3.49□□□□□ -1.85
VMA21YGR105W PIG1Q06216 648 aa3.49□□□□□ -1.85
VMA21YGR105W GSH2Q08220 491 aa3.49□□□□□ -1.85
VMA21YGR105W BUD7Q08754 746 aa3.49□□□□□ -1.85
VMA21YGR105W FRE3Q08905 711 aa3.49□□□□□ -1.85
VMA21YGR105W YLR112WQ12130 139 aa3.49□□□□□ -1.85
VMA21YGR105W YCR043CP25361 127 aa3.48□□□□□ -1.85
VMA21YGR105W EAF7P53911 425 aaKnown RBP3.48□□□□□ -1.85
VMA21YGR105W DSE3Q08729 430 aa3.48□□□□□ -1.85
VMA21YGR105W BAG7Q12128 409 aa3.48□□□□□ -1.85
VMA21YGR105W GPA1P08539 472 aa3.47□□□□□ -1.85
VMA21YGR105W MRP2P10663 115 aaPredicted RBP3.47□□□□□ -1.85
VMA21YGR105W NCP1P16603 691 aaKnown RBP3.47□□□□□ -1.85
VMA21YGR105W LRE1P25579 583 aaKnown RBP3.47□□□□□ -1.85
VMA21YGR105W EXO84P38261 753 aa3.47□□□□□ -1.85
VMA21YGR105W ARC40P38328 384 aaKnown RBP3.47□□□□□ -1.85
VMA21YGR105W RPT2P40327 437 aaKnown RBP3.47□□□□□ -1.85
VMA21YGR105W VPS25P47142 202 aa3.47□□□□□ -1.85
VMA21YGR105W ATG23Q06671 453 aa3.47□□□□□ -1.85
VMA21YGR105W MLH2Q07980 695 aa3.47□□□□□ -1.85
VMA21YGR105W YOL057WQ08225 711 aa3.47□□□□□ -1.85
VMA21YGR105W APA1P16550 321 aaKnown RBP3.46□□□□□ -1.86
VMA21YGR105W PHO81P17442 1178 aa3.46□□□□□ -1.86
VMA21YGR105W GEX2P36173 615 aa3.46□□□□□ -1.86
VMA21YGR105W ADE17P38009 592 aaKnown RBP3.46□□□□□ -1.86
VMA21YGR105W UBP13P38187 747 aa3.46□□□□□ -1.86
VMA21YGR105W PHM8P40025 321 aa3.46□□□□□ -1.86
VMA21YGR105W ASG1P40467 964 aa3.46□□□□□ -1.86
VMA21YGR105W FAF1P40546 346 aaPredicted RBP3.46□□□□□ -1.86
VMA21YGR105W TES1P41903 349 aaKnown RBP3.46□□□□□ -1.86
VMA21YGR105W UBP8P50102 471 aa3.46□□□□□ -1.86
VMA21YGR105W SWA2Q06677 668 aa3.46□□□□□ -1.86
VMA21YGR105W VAM6Q07468 1049 aa3.46□□□□□ -1.86
VMA21YGR105W SWT1Q12104 458 aa3.46□□□□□ -1.86
VMA21YGR105W ATP2P00830 511 aaKnown RBP3.45□□□□□ -1.86
VMA21YGR105W YFL068WP0CX99 160 aa3.45□□□□□ -1.86
VMA21YGR105W YLL066W-AP0CY00 160 aa3.45□□□□□ -1.86
VMA21YGR105W YLL067W-AP0CY01 160 aa3.45□□□□□ -1.86
VMA21YGR105W GCS1P35197 352 aa3.45□□□□□ -1.86
VMA21YGR105W MET30P39014 640 aa3.45□□□□□ -1.86
VMA21YGR105W ACA1P39970 489 aa3.45□□□□□ -1.86
VMA21YGR105W IZH1Q03419 316 aa3.45□□□□□ -1.86
VMA21YGR105W YLR049CQ12110 428 aa3.45□□□□□ -1.86
VMA21YGR105W PSF2P40359 213 aa3.44□□□□□ -1.86
VMA21YGR105W YIL161WP40449 235 aaKnown RBP3.44□□□□□ -1.86
VMA21YGR105W DCP2P53550 970 aaKnown RBP3.44□□□□□ -1.86
VMA21YGR105W ARC35P53731 342 aaKnown RBP3.44□□□□□ -1.86
VMA21YGR105W DIG1Q03063 452 aaKnown RBP3.44□□□□□ -1.86
VMA21YGR105W CAC2Q04199 468 aa3.44□□□□□ -1.86
VMA21YGR105W SWF1Q04629 336 aa3.44□□□□□ -1.86
VMA21YGR105W CIA1Q05583 330 aa3.44□□□□□ -1.86
VMA21YGR105W YLR455WQ06188 304 aa3.44□□□□□ -1.86
VMA21YGR105W POS5Q06892 414 aa3.44□□□□□ -1.86
VMA21YGR105W COX17Q12287 69 aa3.44□□□□□ -1.86
VMA21YGR105W PCD1Q12524 340 aa3.44□□□□□ -1.86
VMA21YGR105W CHO1P08456 276 aa3.43□□□□□ -1.86
VMA21YGR105W NUC1P08466 329 aa3.43□□□□□ -1.86
VMA21YGR105W SRP54P20424 541 aaKnown RBP3.43□□□□□ -1.86
VMA21YGR105W NUP120P35729 1037 aa3.43□□□□□ -1.86
VMA21YGR105W YIL169CP40442 995 aa3.43□□□□□ -1.86
VMA21YGR105W PFA5Q03289 374 aa3.43□□□□□ -1.86
VMA21YGR105W ECM16Q04217 1267 aaKnown RBP3.43□□□□□ -1.86
VMA21YGR105W CRN1Q06440 651 aa3.43□□□□□ -1.86
VMA21YGR105W PET111P08468 800 aa3.42□□□□□ -1.86
VMA21YGR105W SPO16P17122 198 aa3.42□□□□□ -1.86
VMA21YGR105W MSM1P22438 575 aa3.42□□□□□ -1.86
VMA21YGR105W YCL049CP25577 312 aa3.42□□□□□ -1.86
VMA21YGR105W MNN2P38069 597 aa3.42□□□□□ -1.86
VMA21YGR105W MAF1P41910 395 aa3.42□□□□□ -1.86
VMA21YGR105W PAP2P53632 584 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms