RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TCD2P36101 447 aaKnown RBP6.63□□□□□ -1.35
MSP1YGR028W GGA2P38817 585 aaKnown RBP6.63□□□□□ -1.35
MSP1YGR028W MBP1P39678 833 aa6.63□□□□□ -1.35
MSP1YGR028W HEM14P40012 539 aa6.63□□□□□ -1.35
MSP1YGR028W YER189WP40104 122 aa6.63□□□□□ -1.35
MSP1YGR028W NNF1P47149 201 aa6.63□□□□□ -1.35
MSP1YGR028W HOP2P53187 214 aa6.63□□□□□ -1.35
MSP1YGR028W ELP3Q02908 557 aaKnown RBP6.63□□□□□ -1.35
MSP1YGR028W UME1Q03010 460 aa6.63□□□□□ -1.35
MSP1YGR028W RPN4Q03465 531 aa6.63□□□□□ -1.35
MSP1YGR028W GYL1Q04322 720 aa6.63□□□□□ -1.35
MSP1YGR028W RTN1Q04947 295 aaKnown RBP6.63□□□□□ -1.35
MSP1YGR028W BI2P03873 423 aa6.62□□□□□ -1.35
MSP1YGR028W RPS3P05750 240 aaKnown RBP6.62□□□□□ -1.35
MSP1YGR028W ARF2P19146 181 aaKnown RBP6.62□□□□□ -1.35
MSP1YGR028W PRP9P19736 530 aaKnown RBP6.62□□□□□ -1.35
MSP1YGR028W SGE1P33335 543 aa6.62□□□□□ -1.35
MSP1YGR028W SAP190P36123 1033 aa6.62□□□□□ -1.35
MSP1YGR028W JNM1P36224 373 aa6.62□□□□□ -1.35
MSP1YGR028W RTT107P38850 1070 aa6.62□□□□□ -1.35
MSP1YGR028W NPY1P53164 384 aa6.62□□□□□ -1.35
MSP1YGR028W PUS2P53167 370 aa6.62□□□□□ -1.35
MSP1YGR028W RSC1P53236 928 aa6.62□□□□□ -1.35
MSP1YGR028W YPL014WQ02606 381 aa6.62□□□□□ -1.35
MSP1YGR028W SMA1Q02651 245 aa6.62□□□□□ -1.35
MSP1YGR028W ECM38Q05902 660 aaPredicted RBP6.62□□□□□ -1.35
MSP1YGR028W CDA2Q06703 312 aa6.62□□□□□ -1.35
MSP1YGR028W THI20Q08224 551 aa6.62□□□□□ -1.35
MSP1YGR028W APC5Q08683 685 aa6.62□□□□□ -1.35
MSP1YGR028W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
MSP1YGR028W BI3Q9ZZW7 517 aa6.62□□□□□ -1.35
MSP1YGR028W SEN1Q00416 2231 aaKnown RBP6.62□□□□□ -1.35
MSP1YGR028W CYC1P00044 109 aaPredicted RBP6.61□□□□□ -1.35
MSP1YGR028W RPL40AP0CH08 128 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W RPL40BP0CH09 128 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W FPR1P20081 114 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W YIH1P25637 258 aa6.61□□□□□ -1.35
MSP1YGR028W GDH3P39708 457 aa6.61□□□□□ -1.35
MSP1YGR028W VFA1P40080 203 aa6.61□□□□□ -1.35
MSP1YGR028W GUS1P46655 708 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
MSP1YGR028W YJR079WP47126 109 aa6.61□□□□□ -1.35
MSP1YGR028W PRP24P49960 444 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W PBP1P53297 722 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W YLR287CQ05881 355 aa6.61□□□□□ -1.35
MSP1YGR028W AIM39Q08223 395 aa6.61□□□□□ -1.35
MSP1YGR028W RRP6Q12149 733 aaKnown RBP6.61□□□□□ -1.35
MSP1YGR028W TEL1P38110 2787 aa6.6□□□□□ -1.35
MSP1YGR028W SOD2P00447 233 aa6.6□□□□□ -1.35
MSP1YGR028W RAD3P06839 778 aa6.6□□□□□ -1.35
MSP1YGR028W CSE1P33307 960 aa6.6□□□□□ -1.35
MSP1YGR028W STE13P33894 931 aa6.6□□□□□ -1.35
MSP1YGR028W YKL050CP35736 922 aa6.6□□□□□ -1.35
MSP1YGR028W YBR184WP38299 523 aa6.6□□□□□ -1.35
MSP1YGR028W OSW5P40219 148 aa6.6□□□□□ -1.35
MSP1YGR028W SNZ3P43545 298 aa6.6□□□□□ -1.35
MSP1YGR028W BST1P43571 1029 aa6.6□□□□□ -1.35
MSP1YGR028W RIM8P53179 542 aa6.6□□□□□ -1.35
MSP1YGR028W YGR283CP53336 341 aaPredicted RBP6.6□□□□□ -1.35
MSP1YGR028W SNZ2P53824 298 aa6.6□□□□□ -1.35
MSP1YGR028W KTR6P54070 446 aa6.6□□□□□ -1.35
MSP1YGR028W BET4Q00618 327 aa6.6□□□□□ -1.35
MSP1YGR028W YMR206WQ03695 313 aa6.6□□□□□ -1.35
MSP1YGR028W AIM32Q04689 311 aa6.6□□□□□ -1.35
MSP1YGR028W NDD1Q08887 554 aa6.6□□□□□ -1.35
MSP1YGR028W HMI1Q12039 706 aa6.6□□□□□ -1.35
MSP1YGR028W MET16P18408 261 aaPredicted RBP6.59□□□□□ -1.35
MSP1YGR028W PRP6P19735 899 aaPredicted RBP6.59□□□□□ -1.35
MSP1YGR028W SEC1P30619 724 aaKnown RBP6.59□□□□□ -1.35
MSP1YGR028W FUN30P31380 1131 aa6.59□□□□□ -1.35
MSP1YGR028W CDC12P32468 407 aaKnown RBP6.59□□□□□ -1.35
MSP1YGR028W SEC6P32844 805 aa6.59□□□□□ -1.35
MSP1YGR028W YKL151CP36059 337 aa6.59□□□□□ -1.35
MSP1YGR028W PXL1P36166 706 aa6.59□□□□□ -1.35
MSP1YGR028W TDA3P38758 523 aa6.59□□□□□ -1.35
MSP1YGR028W LAM1P38851 1228 aa6.59□□□□□ -1.35
MSP1YGR028W DUN1P39009 513 aa6.59□□□□□ -1.35
MSP1YGR028W SAP185P40856 1058 aa6.59□□□□□ -1.35
MSP1YGR028W COP1P53622 1201 aaKnown RBP6.59□□□□□ -1.35
MSP1YGR028W ARA2Q04212 335 aa6.59□□□□□ -1.35
MSP1YGR028W YDR222WQ04925 415 aa6.59□□□□□ -1.35
MSP1YGR028W AAD4Q07747 329 aa6.59□□□□□ -1.35
MSP1YGR028W PEX15Q08215 383 aa6.59□□□□□ -1.35
MSP1YGR028W ADE8P04161 214 aa6.58□□□□□ -1.36
MSP1YGR028W CMP2P14747 604 aa6.58□□□□□ -1.36
MSP1YGR028W PUT4P15380 627 aa6.58□□□□□ -1.36
MSP1YGR028W SPO12P17123 173 aa6.58□□□□□ -1.36
MSP1YGR028W RNQ1P25367 405 aa6.58□□□□□ -1.36
MSP1YGR028W RPC82P32349 654 aa6.58□□□□□ -1.36
MSP1YGR028W RTT101P47050 842 aa6.58□□□□□ -1.36
MSP1YGR028W PYK2P52489 506 aaKnown RBP6.58□□□□□ -1.36
MSP1YGR028W TAN1P53072 289 aaPredicted RBP6.58□□□□□ -1.36
MSP1YGR028W DOS2P54858 310 aa6.58□□□□□ -1.36
MSP1YGR028W HEL2Q05580 639 aaKnown RBP6.58□□□□□ -1.36
MSP1YGR028W RIB2Q12362 591 aaKnown RBP6.58□□□□□ -1.36
MSP1YGR028W VPS5Q92331 675 aa6.58□□□□□ -1.36
MSP1YGR028W RPP2AP05319 106 aaKnown RBP6.57□□□□□ -1.36
MSP1YGR028W IME2P32581 645 aa6.57□□□□□ -1.36
MSP1YGR028W YKR078WP36158 585 aaKnown RBP6.57□□□□□ -1.36
MSP1YGR028W RKM3P38222 552 aa6.57□□□□□ -1.36
MSP1YGR028W SAK1P38990 1142 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms