RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	BI2	P03873	423 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	CUE2	P36075	443 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	FTH1	P38310	465 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	IMD2	P38697	523 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	DPH1	P40487	425 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	IMD3	P50095	523 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	SUB1	P54000	292 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	LGE1	Q02796	332 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	OPY2	Q06810	360 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	YOR389W	Q08912	624 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	LYS21	Q12122	440 aa	Known RBP	5.08	□□□□□ -1.6
SCL1	YGL011C	BAG7	Q12128	409 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	FRE7	Q12333	620 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	VCX1	Q99385	411 aa		5.08	□□□□□ -1.6
SCL1	YGL011C	PCT1	P13259	424 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	MBR1	P23493	339 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	ERG8	P24521	451 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	PTC6	P25646	442 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	CBF2	P32504	956 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	APD1	P38281	316 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	ERV46	P39727	415 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	FMP10	P40098	244 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	ATP23	P53722	227 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	CBK1	P53894	756 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	YPL071C	Q02864	156 aa		5.07	□□□□□ -1.6
SCL1	YGL011C	LEA1	Q08963	238 aa	Predicted RBP	5.07	□□□□□ -1.6
SCL1	YGL011C	NUP1	P20676	1076 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	MAK32	P23060	363 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	MRP20	P32387	263 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	PFK26	P40433	827 aa	Known RBP	5.06	□□□□□ -1.6
SCL1	YGL011C	YRB30	P53107	440 aa	Predicted RBP	5.06	□□□□□ -1.6
SCL1	YGL011C	YNR061C	P53747	219 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	SWA2	Q06677	668 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	PSK2	Q08217	1101 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	YOL087C	Q99247	1116 aa		5.06	□□□□□ -1.6
SCL1	YGL011C	RPB2	P08518	1224 aa	Known RBP	5.05	□□□□□ -1.6
SCL1	YGL011C	ORC2	P32833	620 aa		5.05	□□□□□ -1.6
SCL1	YGL011C	BPL1	P48445	690 aa	Predicted RBP	5.05	□□□□□ -1.6
SCL1	YGL011C	YPR003C	P53394	754 aa		5.05	□□□□□ -1.6
SCL1	YGL011C	THI7	Q05998	598 aa		5.05	□□□□□ -1.6
SCL1	YGL011C	CRN1	Q06440	651 aa		5.05	□□□□□ -1.6
SCL1	YGL011C	NDJ1	Q12366	352 aa		5.05	□□□□□ -1.6
SCL1	YGL011C	ERG27	Q12452	347 aa	Known RBP	5.05	□□□□□ -1.6
SCL1	YGL011C	SRB5	P32585	307 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	CIN1	P40987	1014 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	VPS4	P52917	437 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	SNU56	Q03782	492 aa	Known RBP	5.04	□□□□□ -1.6
SCL1	YGL011C	TPO3	Q06451	622 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	YDR056C	Q12025	205 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	YOR019W	Q99248	730 aa		5.04	□□□□□ -1.6
SCL1	YGL011C	CET1	O13297	549 aa	Predicted RBP	5.03	□□□□□ -1.6
SCL1	YGL011C	CHS3	P29465	1165 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	TFC3	P34111	1160 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	MUD2	P36084	527 aa	Known RBP	5.03	□□□□□ -1.6
SCL1	YGL011C	PHM8	P40025	321 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	MNT3	P40549	630 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	SWP82	P43554	623 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	FCP1	Q03254	732 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	RCO1	Q04779	684 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	THI3	Q07471	609 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	YNL162W-A	Q3E7A8	72 aa		5.03	□□□□□ -1.6
SCL1	YGL011C	FUM1	P08417	488 aa	Known RBP	5.02	□□□□□ -1.61
SCL1	YGL011C	SRP54	P20424	541 aa	Known RBP	5.02	□□□□□ -1.61
SCL1	YGL011C	APN1	P22936	367 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	NTR2	P36118	322 aa	Predicted RBP	5.02	□□□□□ -1.61
SCL1	YGL011C	YEL068C	P39977	110 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	YJR061W	P40355	935 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	CDC1	P40986	491 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	YNL058C	P53947	316 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	COQ11	Q05892	277 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	ORM2	Q06144	216 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	IRC3	Q06683	689 aa		5.02	□□□□□ -1.61
SCL1	YGL011C	PGK1	P00560	416 aa	Known RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	SUI3	P09064	285 aa	Known RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	URE2	P23202	354 aa	Known RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	ALY1	P36117	915 aa		5.01	□□□□□ -1.61
SCL1	YGL011C	ADE17	P38009	592 aa	Known RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	KTR3	P38130	404 aa	Predicted RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	UBP13	P38187	747 aa		5.01	□□□□□ -1.61
SCL1	YGL011C	DCP2	P53550	970 aa	Known RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	RIM13	Q03792	727 aa		5.01	□□□□□ -1.61
SCL1	YGL011C	ENT4	Q07872	247 aa		5.01	□□□□□ -1.61
SCL1	YGL011C	GPN2	Q08726	347 aa	Predicted RBP	5.01	□□□□□ -1.61
SCL1	YGL011C	NUS1	Q12063	375 aa		5.01	□□□□□ -1.61
SCL1	YGL011C	GFD2	P25370	566 aa	Known RBP	5	□□□□□ -1.61
SCL1	YGL011C	ASG1	P40467	964 aa		5	□□□□□ -1.61
SCL1	YGL011C	LYS14	P40971	790 aa		5	□□□□□ -1.61
SCL1	YGL011C	SIP4	P46954	829 aa		5	□□□□□ -1.61
SCL1	YGL011C	RSC9	Q03124	581 aa		5	□□□□□ -1.61
SCL1	YGL011C	NBP2	Q12163	236 aa		5	□□□□□ -1.61
SCL1	YGL011C	ILS1	P09436	1072 aa	Known RBP	4.99	□□□□□ -1.61
SCL1	YGL011C	AAP1	P37898	856 aa	Known RBP	4.99	□□□□□ -1.61
SCL1	YGL011C	SEC24	P40482	926 aa	Known RBP	4.99	□□□□□ -1.61
SCL1	YGL011C	IME4	P41833	600 aa		4.99	□□□□□ -1.61
SCL1	YGL011C	NMD5	P46970	1048 aa		4.99	□□□□□ -1.61
SCL1	YGL011C	PIL1	P53252	339 aa	Known RBP	4.99	□□□□□ -1.61
SCL1	YGL011C	BSC5	P53755	489 aa		4.99	□□□□□ -1.61
SCL1	YGL011C	SEG1	Q04279	960 aa		4.99	□□□□□ -1.61
SCL1	YGL011C	VIP1	Q06685	1146 aa	Known RBP	4.99	□□□□□ -1.61
SCL1	YGL011C	PFA4	Q12006	378 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms