RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SWT1Q12104 458 aa3.63□□□□□ -1.83
LOC1YFR001W COX17Q12287 69 aa3.63□□□□□ -1.83
LOC1YFR001W RGT2Q12300 763 aa3.63□□□□□ -1.83
LOC1YFR001W PCD1Q12524 340 aa3.63□□□□□ -1.83
LOC1YFR001W YER190C-BP0CX94 160 aa3.62□□□□□ -1.83
LOC1YFR001W YEL077W-AP0CX95 160 aa3.62□□□□□ -1.83
LOC1YFR001W YGR296C-BP0CX96 160 aa3.62□□□□□ -1.83
LOC1YFR001W YPL283W-BP0CX97 160 aa3.62□□□□□ -1.83
LOC1YFR001W YPR204C-AP0CX98 160 aa3.62□□□□□ -1.83
LOC1YFR001W PCT1P13259 424 aa3.62□□□□□ -1.83
LOC1YFR001W SPO16P17122 198 aa3.62□□□□□ -1.83
LOC1YFR001W IFA38P38286 347 aa3.62□□□□□ -1.83
LOC1YFR001W ARN1P38731 627 aa3.62□□□□□ -1.83
LOC1YFR001W YIL161WP40449 235 aaKnown RBP3.62□□□□□ -1.83
LOC1YFR001W SAP185P40856 1058 aa3.62□□□□□ -1.83
LOC1YFR001W CSL4P53859 292 aaPredicted RBP3.62□□□□□ -1.83
LOC1YFR001W TFC6Q06339 672 aa3.62□□□□□ -1.83
LOC1YFR001W GEP3Q08622 556 aa3.62□□□□□ -1.83
LOC1YFR001W MSS51P32335 436 aa3.61□□□□□ -1.83
LOC1YFR001W XRS2P33301 854 aa3.61□□□□□ -1.83
LOC1YFR001W VPS24P36095 224 aaKnown RBP3.61□□□□□ -1.83
LOC1YFR001W FLO5P38894 1075 aa3.61□□□□□ -1.83
LOC1YFR001W SMK1P41808 388 aa3.61□□□□□ -1.83
LOC1YFR001W SEC5P89102 971 aa3.61□□□□□ -1.83
LOC1YFR001W VMS1Q04311 632 aaKnown RBP3.61□□□□□ -1.83
LOC1YFR001W PDR8Q06149 701 aa3.61□□□□□ -1.83
LOC1YFR001W PSR2Q07949 397 aa3.61□□□□□ -1.83
LOC1YFR001W YPR089WO13585 888 aa3.6□□□□□ -1.83
LOC1YFR001W TPK1P06244 397 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-LR1P0C2J4 438 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-FP0CX61 438 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-GR2P0CX62 438 aa3.6□□□□□ -1.83
LOC1YFR001W CNA1P23287 553 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-CP25383 438 aa3.6□□□□□ -1.83
LOC1YFR001W PWP2P25635 923 aaKnown RBP3.6□□□□□ -1.83
LOC1YFR001W MRS6P32864 603 aaKnown RBP3.6□□□□□ -1.83
LOC1YFR001W OCT1P35999 772 aa3.6□□□□□ -1.83
LOC1YFR001W PCI8P40512 444 aa3.6□□□□□ -1.83
LOC1YFR001W COG1P53079 417 aa3.6□□□□□ -1.83
LOC1YFR001W DCP2P53550 970 aaKnown RBP3.6□□□□□ -1.83
LOC1YFR001W TY2A-DR2Q03483 438 aa3.6□□□□□ -1.83
LOC1YFR001W CSR1Q06705 408 aaKnown RBP3.6□□□□□ -1.83
LOC1YFR001W TY2A-BQ12260 438 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-OR2Q12293 438 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-DR1Q12392 438 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-OR1Q12439 438 aa3.6□□□□□ -1.83
LOC1YFR001W RRI1Q12468 440 aa3.6□□□□□ -1.83
LOC1YFR001W TY2A-DR3Q99303 438 aa3.6□□□□□ -1.83
LOC1YFR001W YPT1P01123 206 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W SUI3P09064 285 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W MRP2P10663 115 aaPredicted RBP3.59□□□□□ -1.83
LOC1YFR001W SRP54P20424 541 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W RPT3P33298 428 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W ASK1P35734 292 aa3.59□□□□□ -1.83
LOC1YFR001W SPC97P38863 823 aa3.59□□□□□ -1.83
LOC1YFR001W YMR124WP39523 943 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W TPA1P40032 644 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W ASG1P40467 964 aa3.59□□□□□ -1.83
LOC1YFR001W CTF18P49956 741 aa3.59□□□□□ -1.83
LOC1YFR001W ASE1P50275 885 aa3.59□□□□□ -1.83
LOC1YFR001W PSP1P50896 841 aaKnown RBP3.59□□□□□ -1.83
LOC1YFR001W RRT6P53117 311 aaPredicted RBP3.59□□□□□ -1.83
LOC1YFR001W YGR021WP53212 290 aa3.59□□□□□ -1.83
LOC1YFR001W RPL15BP54780 204 aaPredicted RBP3.59□□□□□ -1.83
LOC1YFR001W VTC3Q02725 835 aa3.59□□□□□ -1.83
LOC1YFR001W PIG1Q06216 648 aa3.59□□□□□ -1.83
LOC1YFR001W SWA2Q06677 668 aa3.59□□□□□ -1.83
LOC1YFR001W TMA16Q08687 178 aa3.59□□□□□ -1.83
LOC1YFR001W HER1Q12276 1246 aa3.59□□□□□ -1.83
LOC1YFR001W AIM17P23180 465 aaKnown RBP3.58□□□□□ -1.84
LOC1YFR001W YCR006CP25350 157 aa3.58□□□□□ -1.84
LOC1YFR001W RAD16P31244 790 aa3.58□□□□□ -1.84
LOC1YFR001W MGM1P32266 881 aa3.58□□□□□ -1.84
LOC1YFR001W ADE17P38009 592 aaKnown RBP3.58□□□□□ -1.84
LOC1YFR001W PSY4P38193 441 aa3.58□□□□□ -1.84
LOC1YFR001W FUI1P38196 639 aa3.58□□□□□ -1.84
LOC1YFR001W TOM71P38825 639 aaKnown RBP3.58□□□□□ -1.84
LOC1YFR001W VPS41P38959 992 aa3.58□□□□□ -1.84
LOC1YFR001W BNA1P47096 177 aa3.58□□□□□ -1.84
LOC1YFR001W EAF7P53911 425 aaKnown RBP3.58□□□□□ -1.84
LOC1YFR001W MPS1P54199 764 aa3.58□□□□□ -1.84
LOC1YFR001W MRPL1Q04599 285 aa3.58□□□□□ -1.84
LOC1YFR001W ECM22Q05958 814 aaPredicted RBP3.58□□□□□ -1.84
LOC1YFR001W CRN1Q06440 651 aa3.58□□□□□ -1.84
LOC1YFR001W MCH4Q08268 501 aa3.58□□□□□ -1.84
LOC1YFR001W PFK2P16862 959 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
LOC1YFR001W YCP4P25349 247 aaKnown RBP3.57□□□□□ -1.84
LOC1YFR001W UBP13P38187 747 aa3.57□□□□□ -1.84
LOC1YFR001W SSM4P40318 1319 aa3.57□□□□□ -1.84
LOC1YFR001W IST3P40565 148 aaPredicted RBP3.57□□□□□ -1.84
LOC1YFR001W SCW4P53334 386 aaKnown RBP3.57□□□□□ -1.84
LOC1YFR001W GTR1Q00582 310 aa3.57□□□□□ -1.84
LOC1YFR001W YPL068CQ02749 293 aa3.57□□□□□ -1.84
LOC1YFR001W TRM8Q12009 286 aa3.57□□□□□ -1.84
LOC1YFR001W ATX2Q12067 313 aa3.57□□□□□ -1.84
LOC1YFR001W YER145C-AA0A023PYF4 145 aa3.56□□□□□ -1.84
LOC1YFR001W SNF1P06782 633 aaKnown RBP3.56□□□□□ -1.84
LOC1YFR001W GPA1P08539 472 aa3.56□□□□□ -1.84
LOC1YFR001W SRB5P32585 307 aa3.56□□□□□ -1.84
LOC1YFR001W TEF4P36008 412 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms