RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	TDP1	P38319	544 aa		4.21	□□□□□ -1.74
NUG1	YER006W	SDH8	P38345	138 aa		4.21	□□□□□ -1.74
NUG1	YER006W	MTG2	P38860	518 aa		4.21	□□□□□ -1.74
NUG1	YER006W	REV7	P38927	245 aa		4.21	□□□□□ -1.74
NUG1	YER006W	CCT6	P39079	546 aa		4.21	□□□□□ -1.74
NUG1	YER006W	AIM2	P39721	246 aa		4.21	□□□□□ -1.74
NUG1	YER006W	YEN1	P40028	759 aa		4.21	□□□□□ -1.74
NUG1	YER006W	DDI1	P40087	428 aa		4.21	□□□□□ -1.74
NUG1	YER006W	PCL7	P40186	285 aa		4.21	□□□□□ -1.74
NUG1	YER006W	NDE1	P40215	560 aa		4.21	□□□□□ -1.74
NUG1	YER006W	PDS1	P40316	373 aa	Predicted RBP	4.21	□□□□□ -1.74
NUG1	YER006W	SLM1	P40485	686 aa		4.21	□□□□□ -1.74
NUG1	YER006W	UFE1	P41834	346 aa		4.21	□□□□□ -1.74
NUG1	YER006W	EPL1	P43572	832 aa		4.21	□□□□□ -1.74
NUG1	YER006W	ABM1	P47146	123 aa		4.21	□□□□□ -1.74
NUG1	YER006W	RFX1	P48743	811 aa		4.21	□□□□□ -1.74
NUG1	YER006W	MNT2	P53059	558 aa		4.21	□□□□□ -1.74
NUG1	YER006W	RRT6	P53117	311 aa	Predicted RBP	4.21	□□□□□ -1.74
NUG1	YER006W	PCL10	P53124	433 aa		4.21	□□□□□ -1.74
NUG1	YER006W	CNM67	P53865	581 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	TMA20	P89886	181 aa	Predicted RBP	4.21	□□□□□ -1.74
NUG1	YER006W	REC102	Q02721	264 aa		4.21	□□□□□ -1.74
NUG1	YER006W	ARP9	Q05123	467 aa		4.21	□□□□□ -1.74
NUG1	YER006W	MLC2	Q06580	163 aa		4.21	□□□□□ -1.74
NUG1	YER006W	YOR059C	Q08448	450 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	GPN2	Q08726	347 aa	Predicted RBP	4.21	□□□□□ -1.74
NUG1	YER006W	MSC6	Q08818	692 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	RUP1	Q12242	671 aa		4.21	□□□□□ -1.74
NUG1	YER006W	RTR2	Q12378	196 aa		4.21	□□□□□ -1.74
NUG1	YER006W	HMS1	Q12398	434 aa		4.21	□□□□□ -1.74
NUG1	YER006W	CMR1	Q12510	522 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	CSR2	Q12734	1121 aa		4.21	□□□□□ -1.74
NUG1	YER006W	LAG2	Q92325	660 aa		4.21	□□□□□ -1.74
NUG1	YER006W	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	CBP2	P03874	630 aa	Predicted RBP	4.2	□□□□□ -1.74
NUG1	YER006W	TUB1	P09733	447 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	ALG1	P16661	449 aa		4.2	□□□□□ -1.74
NUG1	YER006W	PRP4	P20053	465 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	DBP5	P20449	482 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	PEP3	P27801	918 aa		4.2	□□□□□ -1.74
NUG1	YER006W	MRP4	P32902	394 aa		4.2	□□□□□ -1.74
NUG1	YER006W	TYE7	P33122	291 aa	Predicted RBP	4.2	□□□□□ -1.74
NUG1	YER006W	LRG1	P35688	1017 aa		4.2	□□□□□ -1.74
NUG1	YER006W	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
NUG1	YER006W	PEX32	P38292	413 aa		4.2	□□□□□ -1.74
NUG1	YER006W	MSS4	P38994	779 aa		4.2	□□□□□ -1.74
NUG1	YER006W	THO1	P40040	218 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	YJR061W	P40355	935 aa		4.2	□□□□□ -1.74
NUG1	YER006W	SER33	P40510	469 aa		4.2	□□□□□ -1.74
NUG1	YER006W	UBP6	P43593	499 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	BNA3	P47039	444 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	LSM8	P47093	109 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	ENT3	P47160	408 aa		4.2	□□□□□ -1.74
NUG1	YER006W	YJR141W	P47172	347 aa	Predicted RBP	4.2	□□□□□ -1.74
NUG1	YER006W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74
NUG1	YER006W	ORC4	P54791	529 aa		4.2	□□□□□ -1.74
NUG1	YER006W	NSE5	Q03718	556 aa		4.2	□□□□□ -1.74
NUG1	YER006W	UTP5	Q04177	643 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	GLO2	Q05584	274 aa		4.2	□□□□□ -1.74
NUG1	YER006W	YLR177W	Q06251	628 aa		4.2	□□□□□ -1.74
NUG1	YER006W	ESF1	Q06344	628 aa	Known RBP	4.2	□□□□□ -1.74
NUG1	YER006W	YPR091C	Q06833	770 aa		4.2	□□□□□ -1.74
NUG1	YER006W	NSE1	Q07913	336 aa		4.2	□□□□□ -1.74
NUG1	YER006W	YAP7	Q08182	245 aa		4.2	□□□□□ -1.74
NUG1	YER006W	SPO21	Q12411	609 aa		4.2	□□□□□ -1.74
NUG1	YER006W	SRN2	Q99176	213 aa		4.2	□□□□□ -1.74
NUG1	YER006W	LAM4	P38800	1345 aa		4.2	□□□□□ -1.74
NUG1	YER006W	FIG2	P25653	1609 aa		4.2	□□□□□ -1.74
NUG1	YER006W	TRP2	P00899	507 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	LEU2	P04173	364 aa	Predicted RBP	4.19	□□□□□ -1.74
NUG1	YER006W	ARG81	P05085	880 aa		4.19	□□□□□ -1.74
NUG1	YER006W	PIF1	P07271	859 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RAP1	P11938	827 aa		4.19	□□□□□ -1.74
NUG1	YER006W	POL30	P15873	258 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	PRP2	P20095	876 aa	Predicted RBP	4.19	□□□□□ -1.74
NUG1	YER006W	CLN2	P20438	545 aa		4.19	□□□□□ -1.74
NUG1	YER006W	VAM7	P32912	316 aa		4.19	□□□□□ -1.74
NUG1	YER006W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
NUG1	YER006W	SMF2	P38778	549 aa		4.19	□□□□□ -1.74
NUG1	YER006W	SEN34	P39707	275 aa		4.19	□□□□□ -1.74
NUG1	YER006W	UBP5	P39944	805 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YIL166C	P40445	542 aa		4.19	□□□□□ -1.74
NUG1	YER006W	PKP1	P40530	394 aa		4.19	□□□□□ -1.74
NUG1	YER006W	SWP82	P43554	623 aa		4.19	□□□□□ -1.74
NUG1	YER006W	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
NUG1	YER006W	MIC19	P43594	170 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RSM26	P47141	266 aa		4.19	□□□□□ -1.74
NUG1	YER006W	UPF3	P48412	387 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	NIT3	P49954	291 aa		4.19	□□□□□ -1.74
NUG1	YER006W	TAF4	P50105	388 aa		4.19	□□□□□ -1.74
NUG1	YER006W	OKP1	P53298	406 aa		4.19	□□□□□ -1.74
NUG1	YER006W	TOF1	P53840	1238 aa		4.19	□□□□□ -1.74
NUG1	YER006W	MPS1	P54199	764 aa		4.19	□□□□□ -1.74
NUG1	YER006W	HMO1	Q03973	246 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	YDR514C	Q04408	483 aa		4.19	□□□□□ -1.74
NUG1	YER006W	GTB1	Q04924	702 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RTT103	Q05543	409 aa		4.19	□□□□□ -1.74
NUG1	YER006W	DSE3	Q08729	430 aa		4.19	□□□□□ -1.74
NUG1	YER006W	AIM41	Q12032	185 aa		4.19	□□□□□ -1.74
NUG1	YER006W	ATG29	Q12092	213 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms