RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W YMR134WP40207 237 aa2.52□□□□□ -2.01
SWR1YDR334W BUD8P41698 603 aa2.52□□□□□ -2.01
SWR1YDR334W HAM1P47119 197 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W MRK1P50873 501 aa2.52□□□□□ -2.01
SWR1YDR334W RRT6P53117 311 aaPredicted RBP2.52□□□□□ -2.01
SWR1YDR334W DUS1P53759 423 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W NSG2P53898 299 aa2.52□□□□□ -2.01
SWR1YDR334W TGL2P54857 326 aa2.52□□□□□ -2.01
SWR1YDR334W YLR345WQ06137 509 aa2.52□□□□□ -2.01
SWR1YDR334W RSB1Q08417 382 aa2.52□□□□□ -2.01
SWR1YDR334W DCI1Q08558 271 aa2.52□□□□□ -2.01
SWR1YDR334W UPC2Q12151 913 aa2.52□□□□□ -2.01
SWR1YDR334W UBR2Q07963 1872 aa2.52□□□□□ -2.01
SWR1YDR334W KRE5P22023 1365 aa2.52□□□□□ -2.01
SWR1YDR334W COQ2P32378 372 aa2.52□□□□□ -2.01
SWR1YDR334W SAC6P32599 642 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W UBP11P36026 717 aa2.52□□□□□ -2.01
SWR1YDR334W ECM4P36156 370 aa2.52□□□□□ -2.01
SWR1YDR334W TIF5P38431 405 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W SET5P38890 526 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W FHL1P39521 936 aa2.52□□□□□ -2.01
SWR1YDR334W ARF3P40994 183 aaRIP-Chip data2.52□□□□□ -2.01 RIP-Chip
SWR1YDR334W ATG4P53867 494 aa2.52□□□□□ -2.01
SWR1YDR334W AAD15Q08361 143 aa2.52□□□□□ -2.01
SWR1YDR334W MUM3Q08750 479 aa2.52□□□□□ -2.01
SWR1YDR334W RAD61Q99359 647 aa2.52□□□□□ -2.01
SWR1YDR334W REP2P03872 296 aa2.52□□□□□ -2.01
SWR1YDR334W MAS2P11914 482 aa2.52□□□□□ -2.01
SWR1YDR334W HOP1P20050 605 aa2.52□□□□□ -2.01
SWR1YDR334W CKI1P20485 582 aa2.52□□□□□ -2.01
SWR1YDR334W MRPS28P21771 286 aa2.52□□□□□ -2.01
SWR1YDR334W GAC1P28006 793 aa2.52□□□□□ -2.01
SWR1YDR334W DCG1P32460 244 aa2.52□□□□□ -2.01
SWR1YDR334W AKL1P38080 1108 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W YSW1P38280 609 aa2.52□□□□□ -2.01
SWR1YDR334W SUR2P38992 349 aa2.52□□□□□ -2.01
SWR1YDR334W LSM5P40089 93 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W PAC11P40960 533 aa2.52□□□□□ -2.01
SWR1YDR334W HSH155P49955 971 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W CTF18P49956 741 aa2.52□□□□□ -2.01
SWR1YDR334W AZR1P50080 613 aa2.52□□□□□ -2.01
SWR1YDR334W FMS1P50264 508 aa2.52□□□□□ -2.01
SWR1YDR334W INP52P50942 1183 aa2.52□□□□□ -2.01
SWR1YDR334W PHO23P50947 330 aa2.52□□□□□ -2.01
SWR1YDR334W YNR063WP53749 607 aa2.52□□□□□ -2.01
SWR1YDR334W YML131WQ03102 365 aa2.52□□□□□ -2.01
SWR1YDR334W SKY1Q03656 742 aa2.52□□□□□ -2.01
SWR1YDR334W GFD1Q04839 188 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W ECI1Q05871 280 aa2.52□□□□□ -2.01
SWR1YDR334W SMC5Q08204 1093 aa2.52□□□□□ -2.01
SWR1YDR334W THI72Q08579 599 aa2.52□□□□□ -2.01
SWR1YDR334W GET4Q12125 312 aa2.52□□□□□ -2.01
SWR1YDR334W SEY1Q99287 776 aa2.52□□□□□ -2.01
SWR1YDR334W FKS1P38631 1876 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W ADR1P07248 1323 aa2.51□□□□□ -2.01
SWR1YDR334W RAS2P01120 322 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W APE1P14904 514 aa2.51□□□□□ -2.01
SWR1YDR334W VPS34P22543 875 aa2.51□□□□□ -2.01
SWR1YDR334W CYS3P31373 394 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W ATG7P38862 630 aa2.51□□□□□ -2.01
SWR1YDR334W UIP3P39547 235 aa2.51□□□□□ -2.01
SWR1YDR334W AFG3P39925 761 aa2.51□□□□□ -2.01
SWR1YDR334W RPC17P47076 161 aa2.51□□□□□ -2.01
SWR1YDR334W TOM22P49334 152 aa2.51□□□□□ -2.01
SWR1YDR334W NSA1P53136 463 aaPredicted RBP2.51□□□□□ -2.01
SWR1YDR334W RMI1Q02685 241 aa2.51□□□□□ -2.01
SWR1YDR334W YAP6Q03935 383 aa2.51□□□□□ -2.01
SWR1YDR334W KRE28Q04431 385 aa2.51□□□□□ -2.01
SWR1YDR334W YDR341CQ05506 607 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W HMI1Q12039 706 aa2.51□□□□□ -2.01
SWR1YDR334W YPR071WQ12346 211 aa2.51□□□□□ -2.01
SWR1YDR334W AVL9Q12500 764 aa2.51□□□□□ -2.01
SWR1YDR334W PEP4P07267 405 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W URA4P20051 364 aa2.51□□□□□ -2.01
SWR1YDR334W IFM1P25038 676 aa2.51□□□□□ -2.01
SWR1YDR334W SWI4P25302 1093 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W SSO1P32867 290 aa2.51□□□□□ -2.01
SWR1YDR334W HXT6P39003 570 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W HXT7P39004 570 aa2.51□□□□□ -2.01
SWR1YDR334W NMD5P46970 1048 aa2.51□□□□□ -2.01
SWR1YDR334W EXG2P52911 562 aa2.51□□□□□ -2.01
SWR1YDR334W LSB1P53281 241 aa2.51□□□□□ -2.01
SWR1YDR334W DSL1P53847 754 aa2.51□□□□□ -2.01
SWR1YDR334W CWC21Q03375 135 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W BUR2Q05949 395 aa2.51□□□□□ -2.01
SWR1YDR334W GUD1Q07729 489 aa2.51□□□□□ -2.01
SWR1YDR334W YLR278CQ05854 1341 aa2.51□□□□□ -2.01
SWR1YDR334W CDC33P07260 213 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W RPB5P20434 215 aa2.51□□□□□ -2.01
SWR1YDR334W BMH1P29311 267 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W MF(ALPHA)2P32435 120 aa2.51□□□□□ -2.01
SWR1YDR334W SWE1P32944 819 aa2.51□□□□□ -2.01
SWR1YDR334W PEX5P35056 612 aa2.51□□□□□ -2.01
SWR1YDR334W YBR242WP38331 238 aa2.51□□□□□ -2.01
SWR1YDR334W SRP68P38687 599 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W SEC31P38968 1273 aaKnown RBP2.51□□□□□ -2.01
SWR1YDR334W NUP60P39705 539 aa2.51□□□□□ -2.01
SWR1YDR334W EAF5P39995 279 aa2.51□□□□□ -2.01
SWR1YDR334W PRM2P40534 656 aa2.51□□□□□ -2.01
SWR1YDR334W CTK3P46963 296 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms