RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W IRE1P32361 1115 aa4.23□□□□□ -1.73
TRS85YDR108W KRE6P32486 720 aa4.23□□□□□ -1.73
TRS85YDR108W HBS1P32769 611 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W SFA1P32771 386 aa4.23□□□□□ -1.73
TRS85YDR108W TFB1P32776 642 aa4.23□□□□□ -1.73
TRS85YDR108W SRP101P32916 621 aa4.23□□□□□ -1.73
TRS85YDR108W YBR032WP38223 100 aa4.23□□□□□ -1.73
TRS85YDR108W IMD2P38697 523 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W MSR1P38714 643 aa4.23□□□□□ -1.73
TRS85YDR108W AIM2P39721 246 aa4.23□□□□□ -1.73
TRS85YDR108W IES5P40060 125 aa4.23□□□□□ -1.73
TRS85YDR108W SEC28P40509 296 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W TIM54P47045 478 aa4.23□□□□□ -1.73
TRS85YDR108W RPC17P47076 161 aa4.23□□□□□ -1.73
TRS85YDR108W EMC2P47133 292 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W YGR237CP50089 785 aa4.23□□□□□ -1.73
TRS85YDR108W YGR111WP53265 400 aa4.23□□□□□ -1.73
TRS85YDR108W DAM1P53267 343 aa4.23□□□□□ -1.73
TRS85YDR108W ASI2P53895 289 aa4.23□□□□□ -1.73
TRS85YDR108W EBS1Q03466 884 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W ECI1Q05871 280 aa4.23□□□□□ -1.73
TRS85YDR108W VTA1Q06263 330 aa4.23□□□□□ -1.73
TRS85YDR108W YPR196WQ06595 470 aa4.23□□□□□ -1.73
TRS85YDR108W IRC3Q06683 689 aa4.23□□□□□ -1.73
TRS85YDR108W YPR084WQ06821 456 aa4.23□□□□□ -1.73
TRS85YDR108W BRE4Q07660 1125 aa4.23□□□□□ -1.73
TRS85YDR108W ATG34Q12292 412 aa4.23□□□□□ -1.73
TRS85YDR108W HMS1Q12398 434 aa4.23□□□□□ -1.73
TRS85YDR108W COR1P07256 457 aa4.22□□□□□ -1.73
TRS85YDR108W TUB1P09733 447 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W KSS1P14681 368 aa4.22□□□□□ -1.73
TRS85YDR108W RAD4P14736 754 aa4.22□□□□□ -1.73
TRS85YDR108W VPS33P20795 691 aa4.22□□□□□ -1.73
TRS85YDR108W ICL1P28240 557 aaPredicted RBP4.22□□□□□ -1.73
TRS85YDR108W PMT1P33775 817 aa4.22□□□□□ -1.73
TRS85YDR108W MAE1P36013 669 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W TGL4P36165 910 aa4.22□□□□□ -1.73
TRS85YDR108W YBR139WP38109 508 aa4.22□□□□□ -1.73
TRS85YDR108W APM3P38153 483 aa4.22□□□□□ -1.73
TRS85YDR108W FUI1P38196 639 aa4.22□□□□□ -1.73
TRS85YDR108W ALG14P38242 237 aa4.22□□□□□ -1.73
TRS85YDR108W RXT2P38255 430 aa4.22□□□□□ -1.73
TRS85YDR108W BCD1P38772 366 aa4.22□□□□□ -1.73
TRS85YDR108W TRM5P38793 499 aa4.22□□□□□ -1.73
TRS85YDR108W SSO2P39926 295 aa4.22□□□□□ -1.73
TRS85YDR108W YJR061WP40355 935 aa4.22□□□□□ -1.73
TRS85YDR108W NMD5P46970 1048 aa4.22□□□□□ -1.73
TRS85YDR108W MAD3P47074 515 aa4.22□□□□□ -1.73
TRS85YDR108W SIW14P53965 281 aa4.22□□□□□ -1.73
TRS85YDR108W SDH1Q00711 640 aa4.22□□□□□ -1.73
TRS85YDR108W MUK1Q02866 612 aa4.22□□□□□ -1.73
TRS85YDR108W DLT1Q04216 342 aa4.22□□□□□ -1.73
TRS85YDR108W DFG5Q05031 458 aa4.22□□□□□ -1.73
TRS85YDR108W NSE3Q05541 303 aa4.22□□□□□ -1.73
TRS85YDR108W SKI7Q08491 747 aaPredicted RBP4.22□□□□□ -1.73
TRS85YDR108W ADR1P07248 1323 aa4.22□□□□□ -1.73
TRS85YDR108W PAB1P04147 577 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
TRS85YDR108W ADE8P04161 214 aa4.22□□□□□ -1.73
TRS85YDR108W GAL1P04385 528 aa4.22□□□□□ -1.73
TRS85YDR108W ARG81P05085 880 aa4.22□□□□□ -1.73
TRS85YDR108W SEC18P18759 758 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W RPS7AP26786 190 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W VMA6P32366 345 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W DOA4P32571 926 aa4.22□□□□□ -1.73
TRS85YDR108W IMP3P32899 183 aaPredicted RBP4.22□□□□□ -1.73
TRS85YDR108W MCD4P36051 919 aa4.22□□□□□ -1.73
TRS85YDR108W ANR2P36090 516 aaPredicted RBP4.22□□□□□ -1.73
TRS85YDR108W PDX3P38075 228 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W BSD2P38356 321 aa4.22□□□□□ -1.73
TRS85YDR108W SMF2P38778 549 aa4.22□□□□□ -1.73
TRS85YDR108W SEC31P38968 1273 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W HAL5P38970 855 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W YGR210CP42942 411 aa4.22□□□□□ -1.73
TRS85YDR108W FET5P43561 622 aa4.22□□□□□ -1.73
TRS85YDR108W EPL1P43572 832 aa4.22□□□□□ -1.73
TRS85YDR108W YFR018CP43599 363 aa4.22□□□□□ -1.73
TRS85YDR108W MNT2P53059 558 aa4.22□□□□□ -1.73
TRS85YDR108W UBX4P54730 416 aa4.22□□□□□ -1.73
TRS85YDR108W NAM8Q00539 523 aaKnown RBP4.22□□□□□ -1.73
TRS85YDR108W YMR027WQ04371 470 aa4.22□□□□□ -1.73
TRS85YDR108W IVY1Q04934 453 aa4.22□□□□□ -1.73
TRS85YDR108W PEX10Q05568 337 aa4.22□□□□□ -1.73
TRS85YDR108W FEX1Q08913 375 aa4.22□□□□□ -1.73
TRS85YDR108W GTT2Q12390 233 aa4.22□□□□□ -1.73
TRS85YDR108W ATG11Q12527 1178 aa4.22□□□□□ -1.73
TRS85YDR108W SNF1P06782 633 aaKnown RBP4.21□□□□□ -1.74
TRS85YDR108W TUB3P09734 445 aaKnown RBP4.21□□□□□ -1.74
TRS85YDR108W ATG22P25568 528 aa4.21□□□□□ -1.74
TRS85YDR108W DAL80P26343 269 aa4.21□□□□□ -1.74
TRS85YDR108W MKS1P34072 584 aa4.21□□□□□ -1.74
TRS85YDR108W SPT10P35208 640 aa4.21□□□□□ -1.74
TRS85YDR108W ARA1P38115 344 aa4.21□□□□□ -1.74
TRS85YDR108W CDS1P38221 457 aa4.21□□□□□ -1.74
TRS85YDR108W POP7P38291 140 aa4.21□□□□□ -1.74
TRS85YDR108W COS111P38308 924 aa4.21□□□□□ -1.74
TRS85YDR108W SPC97P38863 823 aa4.21□□□□□ -1.74
TRS85YDR108W LNP1P38878 278 aa4.21□□□□□ -1.74
TRS85YDR108W DSE1P40077 573 aa4.21□□□□□ -1.74
TRS85YDR108W COS4P43542 379 aa4.21□□□□□ -1.74
TRS85YDR108W YJR141WP47172 347 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms