RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C YDR132CQ03900 495 aa5.32□□□□□ -1.56
SCM3YDL139C YMR018WQ04364 514 aa5.32□□□□□ -1.56
SCM3YDL139C TAF9Q05027 157 aa5.32□□□□□ -1.56
SCM3YDL139C DIS3Q08162 1001 aaKnown RBP5.32□□□□□ -1.56
SCM3YDL139C SDH5Q08230 162 aa5.32□□□□□ -1.56
SCM3YDL139C AIM41Q12032 185 aa5.32□□□□□ -1.56
SCM3YDL139C VPS54Q12071 889 aa5.32□□□□□ -1.56
SCM3YDL139C YOR022CQ12204 715 aa5.32□□□□□ -1.56
SCM3YDL139C TEF1P02994 458 aaKnown RBP5.31□□□□□ -1.56
SCM3YDL139C ENA1P13587 1091 aa5.31□□□□□ -1.56
SCM3YDL139C CDC20P26309 610 aa5.31□□□□□ -1.56
SCM3YDL139C RME1P32338 300 aaKnown RBP5.31□□□□□ -1.56
SCM3YDL139C RPD3P32561 433 aa5.31□□□□□ -1.56
SCM3YDL139C YBL055CP34220 418 aaPredicted RBP5.31□□□□□ -1.56
SCM3YDL139C MUD2P36084 527 aaKnown RBP5.31□□□□□ -1.56
SCM3YDL139C APN2P38207 520 aa5.31□□□□□ -1.56
SCM3YDL139C MMS21P38632 267 aa5.31□□□□□ -1.56
SCM3YDL139C SAW1P39735 261 aa5.31□□□□□ -1.56
SCM3YDL139C ZRG8P40021 1076 aa5.31□□□□□ -1.56
SCM3YDL139C CAF16P43569 289 aa5.31□□□□□ -1.56
SCM3YDL139C HXT16P47185 567 aa5.31□□□□□ -1.56
SCM3YDL139C RAI1P53063 387 aaKnown RBP5.31□□□□□ -1.56
SCM3YDL139C YGL036WP53185 909 aaPredicted RBP5.31□□□□□ -1.56
SCM3YDL139C ENA2Q01896 1091 aa5.31□□□□□ -1.56
SCM3YDL139C GCN5Q03330 439 aa5.31□□□□□ -1.56
SCM3YDL139C LRS4Q04087 347 aaKnown RBP5.31□□□□□ -1.56
SCM3YDL139C REH1Q06709 432 aa5.31□□□□□ -1.56
SCM3YDL139C ENA5Q12691 1091 aa5.31□□□□□ -1.56
SCM3YDL139C SWI6P09959 803 aa5.3□□□□□ -1.56
SCM3YDL139C WHI2P12611 486 aa5.3□□□□□ -1.56
SCM3YDL139C COX11P19516 300 aaKnown RBP5.3□□□□□ -1.56
SCM3YDL139C PCL2P25693 308 aa5.3□□□□□ -1.56
SCM3YDL139C FRE1P32791 686 aa5.3□□□□□ -1.56
SCM3YDL139C STE13P33894 931 aa5.3□□□□□ -1.56
SCM3YDL139C GCS1P35197 352 aa5.3□□□□□ -1.56
SCM3YDL139C DUG2P38149 878 aa5.3□□□□□ -1.56
SCM3YDL139C MMS4P38257 691 aa5.3□□□□□ -1.56
SCM3YDL139C TDA3P38758 523 aa5.3□□□□□ -1.56
SCM3YDL139C RAD26P40352 1085 aa5.3□□□□□ -1.56
SCM3YDL139C SCD6P45978 349 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SCM3YDL139C AZR1P50080 613 aa5.3□□□□□ -1.56
SCM3YDL139C ALT2P52892 507 aa5.3□□□□□ -1.56
SCM3YDL139C YGR012WP53206 393 aa5.3□□□□□ -1.56
SCM3YDL139C BET4Q00618 327 aa5.3□□□□□ -1.56
SCM3YDL139C YMR160WQ03823 816 aa5.3□□□□□ -1.56
SCM3YDL139C PIG1Q06216 648 aa5.3□□□□□ -1.56
SCM3YDL139C OPY2Q06810 360 aa5.3□□□□□ -1.56
SCM3YDL139C NUR1Q12066 484 aa5.3□□□□□ -1.56
SCM3YDL139C TY3A-GQ12173 290 aa5.3□□□□□ -1.56
SCM3YDL139C CTF3Q12748 733 aa5.3□□□□□ -1.56
SCM3YDL139C YDR524C-BQ3E6R4 66 aa5.3□□□□□ -1.56
SCM3YDL139C TY3A-IQ99219 290 aa5.3□□□□□ -1.56
SCM3YDL139C AEP2P22136 580 aa5.29□□□□□ -1.56
SCM3YDL139C MSS51P32335 436 aa5.29□□□□□ -1.56
SCM3YDL139C CSE2P33308 149 aa5.29□□□□□ -1.56
SCM3YDL139C BLI1P35727 113 aa5.29□□□□□ -1.56
SCM3YDL139C MRPL7P36519 292 aa5.29□□□□□ -1.56
SCM3YDL139C GDT1P38301 280 aaPredicted RBP5.29□□□□□ -1.56
SCM3YDL139C VPS41P38959 992 aa5.29□□□□□ -1.56
SCM3YDL139C CCT2P39076 527 aaKnown RBP5.29□□□□□ -1.56
SCM3YDL139C FLC2P39719 783 aa5.29□□□□□ -1.56
SCM3YDL139C FTR1P40088 404 aa5.29□□□□□ -1.56
SCM3YDL139C SMX2P40204 77 aaKnown RBP5.29□□□□□ -1.56
SCM3YDL139C YFL012WP43580 148 aa5.29□□□□□ -1.56
SCM3YDL139C ALG11P53954 548 aaKnown RBP5.29□□□□□ -1.56
SCM3YDL139C YKR011CQ02209 353 aa5.29□□□□□ -1.56
SCM3YDL139C SSL1Q04673 461 aaPredicted RBP5.29□□□□□ -1.56
SCM3YDL139C YLR455WQ06188 304 aa5.29□□□□□ -1.56
SCM3YDL139C THI73Q07904 523 aa5.29□□□□□ -1.56
SCM3YDL139C MDM20Q12387 796 aaKnown RBP5.29□□□□□ -1.56
SCM3YDL139C RRD2Q12461 358 aa5.29□□□□□ -1.56
SCM3YDL139C RPS9AO13516 197 aaKnown RBP5.28□□□□□ -1.56
SCM3YDL139C YLR358CO13565 187 aa5.28□□□□□ -1.56
SCM3YDL139C HIP1P06775 603 aa5.28□□□□□ -1.56
SCM3YDL139C HEM15P16622 393 aa5.28□□□□□ -1.56
SCM3YDL139C SFL1P20134 766 aa5.28□□□□□ -1.56
SCM3YDL139C POT1P27796 417 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SCM3YDL139C DBF4P32325 704 aa5.28□□□□□ -1.56
SCM3YDL139C PLC1P32383 869 aa5.28□□□□□ -1.56
SCM3YDL139C HEL1P36113 551 aa5.28□□□□□ -1.56
SCM3YDL139C YBR062CP38239 180 aa5.28□□□□□ -1.56
SCM3YDL139C VHC1P38329 1120 aa5.28□□□□□ -1.56
SCM3YDL139C YHR054CP38780 354 aa5.28□□□□□ -1.56
SCM3YDL139C MGS1P40151 587 aa5.28□□□□□ -1.56
SCM3YDL139C PSF2P40359 213 aa5.28□□□□□ -1.56
SCM3YDL139C MND2P40577 368 aa5.28□□□□□ -1.56
SCM3YDL139C RRT5P43607 289 aa5.28□□□□□ -1.56
SCM3YDL139C URB2P47108 1174 aa5.28□□□□□ -1.56
SCM3YDL139C SGM1P47166 707 aa5.28□□□□□ -1.56
SCM3YDL139C MET13P53128 600 aa5.28□□□□□ -1.56
SCM3YDL139C GTF1P53260 183 aaPredicted RBP5.28□□□□□ -1.56
SCM3YDL139C SNP1Q00916 300 aaPredicted RBP5.28□□□□□ -1.56
SCM3YDL139C MUB1Q03162 620 aa5.28□□□□□ -1.56
SCM3YDL139C ICL2Q12031 575 aa5.28□□□□□ -1.56
SCM3YDL139C RPS3P05750 240 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C TPK1P06244 397 aa5.27□□□□□ -1.57
SCM3YDL139C ADE3P07245 946 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C TRX1P22217 103 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C CYS3P31373 394 aaKnown RBP5.27□□□□□ -1.57
SCM3YDL139C YEL043WP32618 956 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms