RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A PMT6P42934 759 aa2.4□□□□□ -2.03
VMA9YCL005W-A CTK3P46963 296 aaPredicted RBP2.4□□□□□ -2.03
VMA9YCL005W-A NPA3P47122 385 aa2.4□□□□□ -2.03
VMA9YCL005W-A VMA10P48836 114 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A YIP4P53093 235 aa2.4□□□□□ -2.03
VMA9YCL005W-A SPC98P53540 846 aa2.4□□□□□ -2.03
VMA9YCL005W-A CNM67P53865 581 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A TIM44Q01852 431 aa2.4□□□□□ -2.03
VMA9YCL005W-A YML119WQ03208 357 aa2.4□□□□□ -2.03
VMA9YCL005W-A EFR3Q03653 782 aaKnown RBP2.4□□□□□ -2.03
VMA9YCL005W-A YDR179W-AQ03983 463 aa2.4□□□□□ -2.03
VMA9YCL005W-A PLP1Q04004 230 aa2.4□□□□□ -2.03
VMA9YCL005W-A GYL1Q04322 720 aa2.4□□□□□ -2.03
VMA9YCL005W-A HLR1Q04429 423 aa2.4□□□□□ -2.03
VMA9YCL005W-A MGR3Q04472 501 aa2.4□□□□□ -2.03
VMA9YCL005W-A UFO1Q04511 668 aa2.4□□□□□ -2.03
VMA9YCL005W-A HOF1Q05080 669 aa2.4□□□□□ -2.03
VMA9YCL005W-A NNT1Q05874 261 aa2.4□□□□□ -2.03
VMA9YCL005W-A YLR287CQ05881 355 aa2.4□□□□□ -2.03
VMA9YCL005W-A ATG23Q06671 453 aa2.4□□□□□ -2.03
VMA9YCL005W-A AIM41Q12032 185 aa2.4□□□□□ -2.03
VMA9YCL005W-A BUG1Q12191 341 aa2.4□□□□□ -2.03
VMA9YCL005W-A YOL114CQ12322 202 aa2.4□□□□□ -2.03
VMA9YCL005W-A CAT8P39113 1433 aa2.4□□□□□ -2.03
VMA9YCL005W-A RKR1Q04781 1562 aa2.4□□□□□ -2.03
VMA9YCL005W-A PDR18P53756 1333 aa2.4□□□□□ -2.03
VMA9YCL005W-A LYS2P07702 1392 aa2.39□□□□□ -2.03
VMA9YCL005W-A DRS2P39524 1355 aa2.39□□□□□ -2.03
VMA9YCL005W-A RAD1P06777 1100 aa2.39□□□□□ -2.03
VMA9YCL005W-A PET494P07390 489 aaPredicted RBP2.39□□□□□ -2.03
VMA9YCL005W-A YML002WP0CF17 737 aa2.39□□□□□ -2.03
VMA9YCL005W-A PMR1P13586 950 aa2.39□□□□□ -2.03
VMA9YCL005W-A GCN3P14741 305 aa2.39□□□□□ -2.03
VMA9YCL005W-A SEC63P14906 663 aa2.39□□□□□ -2.03
VMA9YCL005W-A YEF3P16521 1044 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A RPB4P20433 221 aaPredicted RBP2.39□□□□□ -2.03
VMA9YCL005W-A CBP3P21560 335 aa2.39□□□□□ -2.03
VMA9YCL005W-A VPS1P21576 704 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A UBC1P21734 215 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A CLB2P24869 491 aa2.39□□□□□ -2.03
VMA9YCL005W-A CWH43P25618 953 aa2.39□□□□□ -2.03
VMA9YCL005W-A NTH1P32356 751 aa2.39□□□□□ -2.03
VMA9YCL005W-A MRE11P32829 692 aa2.39□□□□□ -2.03
VMA9YCL005W-A TGL1P34163 548 aa2.39□□□□□ -2.03
VMA9YCL005W-A PRX1P34227 261 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A COY1P34237 679 aa2.39□□□□□ -2.03
VMA9YCL005W-A YKT6P36015 200 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A GMH1P36125 273 aa2.39□□□□□ -2.03
VMA9YCL005W-A ECM4P36156 370 aa2.39□□□□□ -2.03
VMA9YCL005W-A YLF2P38746 405 aa2.39□□□□□ -2.03
VMA9YCL005W-A RRP8P38961 392 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A SMC2P38989 1170 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A SYG1P40528 902 aa2.39□□□□□ -2.03
VMA9YCL005W-A ULP2P40537 1034 aaPredicted RBP2.39□□□□□ -2.03
VMA9YCL005W-A QRI1P43123 477 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A MAD3P47074 515 aa2.39□□□□□ -2.03
VMA9YCL005W-A ASK10P48361 1146 aa2.39□□□□□ -2.03
VMA9YCL005W-A ASN1P49089 572 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A YGL242CP53066 181 aa2.39□□□□□ -2.03
VMA9YCL005W-A KAP114P53067 1004 aa2.39□□□□□ -2.03
VMA9YCL005W-A SHE10P53075 577 aa2.39□□□□□ -2.03
VMA9YCL005W-A MDR1P53258 950 aa2.39□□□□□ -2.03
VMA9YCL005W-A COP1P53622 1201 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A VPS75P53853 264 aa2.39□□□□□ -2.03
VMA9YCL005W-A IPI3P53877 555 aa2.39□□□□□ -2.03
VMA9YCL005W-A BNI5P53890 448 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A ALF1P53904 254 aa2.39□□□□□ -2.03
VMA9YCL005W-A FYV6P53913 173 aa2.39□□□□□ -2.03
VMA9YCL005W-A NCS2P53923 493 aaPredicted RBP2.39□□□□□ -2.03
VMA9YCL005W-A TIM11P81449 96 aaPredicted RBP2.39□□□□□ -2.03
VMA9YCL005W-A SEC5P89102 971 aa2.39□□□□□ -2.03
VMA9YCL005W-A RPS15Q01855 142 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A VTC3Q02725 835 aa2.39□□□□□ -2.03
VMA9YCL005W-A SRL4Q03085 281 aa2.39□□□□□ -2.03
VMA9YCL005W-A VPS38Q05919 439 aa2.39□□□□□ -2.03
VMA9YCL005W-A SEC10Q06245 871 aa2.39□□□□□ -2.03
VMA9YCL005W-A HIM1Q06674 414 aa2.39□□□□□ -2.03
VMA9YCL005W-A OPY2Q06810 360 aa2.39□□□□□ -2.03
VMA9YCL005W-A BRE1Q07457 700 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A BUD7Q08754 746 aa2.39□□□□□ -2.03
VMA9YCL005W-A MRN1Q08925 612 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
VMA9YCL005W-A TAF10Q12030 206 aa2.39□□□□□ -2.03
VMA9YCL005W-A ICL2Q12031 575 aa2.39□□□□□ -2.03
VMA9YCL005W-A PSF3Q12146 194 aa2.39□□□□□ -2.03
VMA9YCL005W-A SCM3Q12334 223 aa2.39□□□□□ -2.03
VMA9YCL005W-A RTP1Q12751 981 aa2.39□□□□□ -2.03
VMA9YCL005W-A NCB2Q92317 146 aa2.39□□□□□ -2.03
VMA9YCL005W-A DDP1Q99321 188 aaKnown RBP2.39□□□□□ -2.03
VMA9YCL005W-A DNF1P32660 1571 aa2.39□□□□□ -2.03
VMA9YCL005W-A KRE5P22023 1365 aa2.38□□□□□ -2.03
VMA9YCL005W-A AUS1Q08409 1394 aa2.38□□□□□ -2.03
VMA9YCL005W-A PDR15Q04182 1529 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A MSS18P08593 268 aa2.38□□□□□ -2.03
VMA9YCL005W-A ABF1P14164 731 aa2.38□□□□□ -2.03
VMA9YCL005W-A HOP1P20050 605 aa2.38□□□□□ -2.03
VMA9YCL005W-A VPS33P20795 691 aa2.38□□□□□ -2.03
VMA9YCL005W-A SWI4P25302 1093 aaKnown RBP2.38□□□□□ -2.03
VMA9YCL005W-A PRD1P25375 712 aa2.38□□□□□ -2.03
VMA9YCL005W-A ITR2P30606 609 aa2.38□□□□□ -2.03
VMA9YCL005W-A PRE2P30656 287 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms