RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	CLB4	P24871	460 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	XRS2	P33301	854 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	PTK1	P36002	662 aa	Predicted RBP	5.73	□□□□□ -1.49
UBA3	YPR066W	RRN3	P36070	627 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	PIG2	P40187	538 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	SMK1	P41808	388 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	AVT1	P47082	602 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	YRB30	P53107	440 aa	Predicted RBP	5.73	□□□□□ -1.49
UBA3	YPR066W	CHS5	Q12114	671 aa	Known RBP	5.73	□□□□□ -1.49
UBA3	YPR066W	ZRT2	Q12436	422 aa		5.73	□□□□□ -1.49
UBA3	YPR066W	SUP35	P05453	685 aa	Known RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	ADE3	P07245	946 aa	Known RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	MIS1	P09440	975 aa	Known RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	UBC1	P21734	215 aa	Known RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	ERG4	P25340	473 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	GFD2	P25370	566 aa	Known RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	YJL163C	P46996	555 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	PHO23	P50947	330 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	PAN2	P53010	1115 aa	Predicted RBP	5.72	□□□□□ -1.49
UBA3	YPR066W	MEP3	P53390	489 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	ENT2	Q05785	613 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	TFC6	Q06339	672 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	ARR3	Q06598	404 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	OPY2	Q06810	360 aa		5.72	□□□□□ -1.49
UBA3	YPR066W	PCK1	P10963	549 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	RIT1	P23796	513 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	RIP-Chip
UBA3	YPR066W	LRO1	P40345	661 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	PSF2	P40359	213 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	MNT3	P40549	630 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	POL31	P46957	487 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	YGL242C	P53066	181 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	RRT6	P53117	311 aa	Predicted RBP	5.71	□□□□□ -1.5
UBA3	YPR066W	FRE5	Q08908	694 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	RRI2	Q12348	645 aa		5.71	□□□□□ -1.5
UBA3	YPR066W	SIR3	P06701	978 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	SNF1	P06782	633 aa	Known RBP	5.7	□□□□□ -1.5
UBA3	YPR066W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
UBA3	YPR066W	VPS33	P20795	691 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	RER1	P25560	188 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	EFT1	P32324	842 aa	Known RBP	5.7	□□□□□ -1.5
UBA3	YPR066W	RPN12	P32496	274 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	HIS7	P33734	552 aa	Known RBP	5.7	□□□□□ -1.5
UBA3	YPR066W	IFA38	P38286	347 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	STB5	P38699	743 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	MPS3	P47069	682 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	YGR054W	P53235	642 aa	Known RBP	5.7	□□□□□ -1.5
UBA3	YPR066W	TRS31	Q03337	283 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	ADY4	Q05955	493 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	YDR056C	Q12025	205 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	ICL2	Q12031	575 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	MLH3	Q12083	715 aa		5.7	□□□□□ -1.5
UBA3	YPR066W	SET3	P36124	751 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	REV7	P38927	245 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	VFA1	P40080	203 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	KHA1	P40309	873 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	RAD26	P40352	1085 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	IMA1	P53051	589 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	CLU1	Q03690	1277 aa	Known RBP	5.69	□□□□□ -1.5
UBA3	YPR066W	IZH3	Q07959	543 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	TRM8	Q12009	286 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	YKL033W-A	Q86ZR7	236 aa		5.69	□□□□□ -1.5
UBA3	YPR066W	TUB2	P02557	457 aa	Known RBP	5.68	□□□□□ -1.5
UBA3	YPR066W	CHS3	P29465	1165 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	ARP2	P32381	391 aa	Known RBP	5.68	□□□□□ -1.5
UBA3	YPR066W	SLC1	P33333	303 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	PHO11	P35842	467 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	PHO12	P38693	467 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	AXL2	P38928	823 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	YJL193W	P39542	402 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	FMP52	P40008	231 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	CAB2	P40506	365 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	CTF18	P49956	741 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	COS12	P53053	380 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	FHN1	P53279	174 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	VID22	Q05934	901 aa		5.68	□□□□□ -1.5
UBA3	YPR066W	CLF1	Q12309	687 aa	Predicted RBP	5.68	□□□□□ -1.5
UBA3	YPR066W	ALG7	P07286	448 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	SEC12	P11655	471 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	BIK1	P11709	440 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	GUK1	P15454	187 aa	Known RBP	5.67	□□□□□ -1.5
UBA3	YPR066W	HRR25	P29295	494 aa	Known RBP	5.67	□□□□□ -1.5
UBA3	YPR066W	YEL025C	P39991	1188 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	KAP123	P40069	1113 aa	Known RBP	5.67	□□□□□ -1.5
UBA3	YPR066W	YMR147W	P40218	223 aa	Known RBP	5.67	□□□□□ -1.5
UBA3	YPR066W	ARA2	Q04212	335 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	YMR018W	Q04364	514 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	YLR040C	Q07988	224 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	LAM4	P38800	1345 aa		5.67	□□□□□ -1.5
UBA3	YPR066W	CHO2	P05374	869 aa	Known RBP	5.66	□□□□□ -1.5
UBA3	YPR066W	THR1	P17423	357 aa	Known RBP	5.66	□□□□□ -1.5
UBA3	YPR066W	BET2	P20133	325 aa		5.66	□□□□□ -1.5
UBA3	YPR066W	ELM1	P32801	640 aa		5.66	□□□□□ -1.5
UBA3	YPR066W	DEF1	P35732	738 aa	Known RBP	5.66	□□□□□ -1.5
UBA3	YPR066W	APE3	P37302	537 aa	Known RBP	5.66	□□□□□ -1.5
UBA3	YPR066W	CTP1	P38152	299 aa		5.66	□□□□□ -1.5
UBA3	YPR066W	NPR3	P38742	1146 aa		5.66	□□□□□ -1.5
UBA3	YPR066W	FAF1	P40546	346 aa	Predicted RBP	5.66	□□□□□ -1.5
UBA3	YPR066W	AIM6	Q07716	390 aa		5.66	□□□□□ -1.5
UBA3	YPR066W	PCD1	Q12524	340 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms