RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	ALY1	P36117	915 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	MSG5	P38590	489 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	YAT2	P40017	923 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	ELO3	P40319	345 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	VAC7	P53950	1165 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	MTG1	Q03151	367 aa	Predicted RBP	10.79	□□□□□ -0.68
PEX25	YPL112C	TDA9	Q04545	1251 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	POB3	Q04636	552 aa	Known RBP	10.79	□□□□□ -0.68
PEX25	YPL112C	ARP9	Q05123	467 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	LDB18	Q07887	179 aa		10.79	□□□□□ -0.68
PEX25	YPL112C	UBR1	P19812	1950 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	PMT1	P33775	817 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	YBP1	P38315	674 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	SMF1	P38925	575 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	NDC80	P40460	691 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	GLG2	P47011	380 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	YGL140C	P53120	1219 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	SPC105	P53148	917 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	IPI3	P53877	555 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	TEP1	P53916	434 aa		10.78	□□□□□ -0.68
PEX25	YPL112C	YMR178W	Q03219	274 aa	Known RBP	10.78	□□□□□ -0.68
PEX25	YPL112C	CHL1	P22516	861 aa	Predicted RBP	10.77	□□□□□ -0.69
PEX25	YPL112C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	10.77	□□□□□ -0.69	not detected
PEX25	YPL112C	UTR2	P32623	467 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	TFB1	P32776	642 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	ECM2	P38241	364 aa	Known RBP	10.77	□□□□□ -0.69
PEX25	YPL112C	WSC4	P38739	605 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	SIP4	P46954	829 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	STR3	P53101	465 aa	Known RBP	10.77	□□□□□ -0.69
PEX25	YPL112C	GND2	P53319	492 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	SIW14	P53965	281 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	CDC14	Q00684	551 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	ECI1	Q05871	280 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	MCM16	Q12262	181 aa		10.77	□□□□□ -0.69
PEX25	YPL112C	RPL40A	P0CH08	128 aa	Known RBP	10.76	□□□□□ -0.69
PEX25	YPL112C	RPL40B	P0CH09	128 aa	Known RBP	10.76	□□□□□ -0.69
PEX25	YPL112C	DCC1	P25559	380 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	SCD5	P34758	872 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	TFA2	P36145	328 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	10.76	□□□□□ -0.69	not detected
PEX25	YPL112C	TAE1	P38340	232 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	MMS21	P38632	267 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	TIF34	P40217	347 aa	Known RBP	10.76	□□□□□ -0.69
PEX25	YPL112C	IML2	P47031	731 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	CSN12	P47130	423 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	MNN10	P50108	393 aa	Known RBP	10.76	□□□□□ -0.69
PEX25	YPL112C	YMR160W	Q03823	816 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	PPN1	Q04119	674 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	URH1	Q04179	340 aa		10.76	□□□□□ -0.69
PEX25	YPL112C	QCR6	P00127	147 aa		10.75	□□□□□ -0.69
PEX25	YPL112C	CDC24	P11433	854 aa	Predicted RBP	10.75	□□□□□ -0.69
PEX25	YPL112C	GCD6	P32501	712 aa	Known RBP	10.75	□□□□□ -0.69
PEX25	YPL112C	PFS1	P38872	237 aa		10.75	□□□□□ -0.69
PEX25	YPL112C	BUD13	P46947	266 aa	Predicted RBP	10.75	□□□□□ -0.69
PEX25	YPL112C	RSC4	Q02206	625 aa		10.75	□□□□□ -0.69
PEX25	YPL112C	SAM4	Q08985	325 aa	Known RBP	10.75	□□□□□ -0.69
PEX25	YPL112C	NAG1	Q8TGN9	163 aa		10.75	□□□□□ -0.69
PEX25	YPL112C	Q0182	Q9ZZW1	134 aa		10.75	□□□□□ -0.69
PEX25	YPL112C	MPH2	P0CD99	609 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	10.74	□□□□□ -0.69	not detected
PEX25	YPL112C	CLN1	P20437	546 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	BRF1	P29056	596 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	POP4	P38336	279 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	YPR003C	P53394	754 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	SNO2	P53823	222 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	SLU7	Q02775	382 aa	Known RBP	10.74	□□□□□ -0.69
PEX25	YPL112C	RLI1	Q03195	608 aa	Known RBP	10.74	□□□□□ -0.69
PEX25	YPL112C	PIN2	Q12057	282 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	GNT1	Q12096	491 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	LDB17	Q12342	491 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	AVL9	Q12500	764 aa		10.74	□□□□□ -0.69
PEX25	YPL112C	PMI40	P29952	429 aa	Known RBP	10.73	□□□□□ -0.69
PEX25	YPL112C	NDI1	P32340	513 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	AEP1	P32493	518 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	KES1	P35844	434 aa	Known RBP	10.73	□□□□□ -0.69
PEX25	YPL112C	IRS4	P36115	615 aa	Known RBP	10.73	□□□□□ -0.69
PEX25	YPL112C	VHC1	P38329	1120 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	MSR1	P38714	643 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	MAD1	P40957	749 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	NBP35	P52920	328 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	SAP4	P53036	818 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	MET14	Q02196	202 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	YDL129W	Q07555	291 aa		10.73	□□□□□ -0.69
PEX25	YPL112C	POL30	P15873	258 aa	Known RBP	10.72	□□□□□ -0.69
PEX25	YPL112C	LRP1	P38801	184 aa	Known RBP	10.72	□□□□□ -0.69
PEX25	YPL112C	SCC4	P40090	624 aa		10.72	□□□□□ -0.69
PEX25	YPL112C	YJL070C	P40361	888 aa		10.72	□□□□□ -0.69
PEX25	YPL112C	TES1	P41903	349 aa	Known RBP	10.72	□□□□□ -0.69
PEX25	YPL112C	UTP6	Q02354	440 aa	Known RBP	10.72	□□□□□ -0.69
PEX25	YPL112C	YPL113C	Q02961	396 aa		10.72	□□□□□ -0.69
PEX25	YPL112C	ATG10	Q07879	167 aa		10.72	□□□□□ -0.69
PEX25	YPL112C	HOS1	Q12214	470 aa		10.72	□□□□□ -0.69
PEX25	YPL112C	COX3	P00420	269 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	YSP3	P25036	478 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	EMC1	P25574	760 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	HEM12	P32347	362 aa	Predicted RBP	10.71	□□□□□ -0.69
PEX25	YPL112C	YKL151C	P36059	337 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	SLX8	P40072	274 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	DSN1	P40568	576 aa		10.71	□□□□□ -0.69
PEX25	YPL112C	MTO1	P53070	669 aa		10.71	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 701.8 ms