RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C IMO32P53219 342 aa5.07□□□□□ -1.6
CUS1YMR240C YDL242WQ07746 117 aa5.07□□□□□ -1.6
CUS1YMR240C NBP2Q12163 236 aa5.07□□□□□ -1.6
CUS1YMR240C RPA135P22138 1203 aaKnown RBP5.06□□□□□ -1.6
CUS1YMR240C LRE1P25579 583 aaKnown RBP5.06□□□□□ -1.6
CUS1YMR240C NOP16P40007 231 aaKnown RBP5.06□□□□□ -1.6
CUS1YMR240C YIL161WP40449 235 aaKnown RBP5.06□□□□□ -1.6
CUS1YMR240C VPS4P52917 437 aa5.06□□□□□ -1.6
CUS1YMR240C UBP16Q02863 499 aa5.06□□□□□ -1.6
CUS1YMR240C RCO1Q04779 684 aa5.06□□□□□ -1.6
CUS1YMR240C IRC10Q08118 586 aa5.06□□□□□ -1.6
CUS1YMR240C SWT1Q12104 458 aa5.06□□□□□ -1.6
CUS1YMR240C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
CUS1YMR240C LCB4Q12246 624 aa5.06□□□□□ -1.6
CUS1YMR240C PRS5Q12265 496 aaKnown RBP5.06□□□□□ -1.6
CUS1YMR240C YLR302CO13544 120 aa5.05□□□□□ -1.6
CUS1YMR240C YML003WP0CF16 290 aa5.05□□□□□ -1.6
CUS1YMR240C STE12P13574 688 aa5.05□□□□□ -1.6
CUS1YMR240C PMA2P19657 947 aa5.05□□□□□ -1.6
CUS1YMR240C PAH1P32567 862 aa5.05□□□□□ -1.6
CUS1YMR240C GDA1P32621 518 aa5.05□□□□□ -1.6
CUS1YMR240C MUD2P36084 527 aaKnown RBP5.05□□□□□ -1.6
CUS1YMR240C RPF2P36160 344 aaKnown RBP5.05□□□□□ -1.6
CUS1YMR240C MTG2P38860 518 aa5.05□□□□□ -1.6
CUS1YMR240C OPT1P40897 799 aa5.05□□□□□ -1.6
CUS1YMR240C YGR079WP53249 370 aa5.05□□□□□ -1.6
CUS1YMR240C YML119WQ03208 357 aa5.05□□□□□ -1.6
CUS1YMR240C WAR1Q03631 944 aa5.05□□□□□ -1.6
CUS1YMR240C STP3Q05937 343 aa5.05□□□□□ -1.6
CUS1YMR240C TMA16Q08687 178 aa5.05□□□□□ -1.6
CUS1YMR240C ERG27Q12452 347 aaKnown RBP5.05□□□□□ -1.6
CUS1YMR240C YMR084WA2P2R3 262 aa5.04□□□□□ -1.6
CUS1YMR240C RPN13O13563 156 aa5.04□□□□□ -1.6
CUS1YMR240C RPL7AP05737 244 aaKnown RBP5.04□□□□□ -1.6
CUS1YMR240C RPB2P08518 1224 aaKnown RBP5.04□□□□□ -1.6
CUS1YMR240C MRPL9P31334 269 aa5.04□□□□□ -1.6
CUS1YMR240C MRP20P32387 263 aa5.04□□□□□ -1.6
CUS1YMR240C EMP70P32802 667 aa5.04□□□□□ -1.6
CUS1YMR240C TDP1P38319 544 aa5.04□□□□□ -1.6
CUS1YMR240C ERC1P38767 581 aa5.04□□□□□ -1.6
CUS1YMR240C SIP4P46954 829 aa5.04□□□□□ -1.6
CUS1YMR240C COG2P53271 262 aa5.04□□□□□ -1.6
CUS1YMR240C REG1Q00816 1014 aa5.04□□□□□ -1.6
CUS1YMR240C GIS1Q03833 894 aa5.04□□□□□ -1.6
CUS1YMR240C ARG7Q04728 441 aa5.04□□□□□ -1.6
CUS1YMR240C PCL8Q08966 492 aa5.04□□□□□ -1.6
CUS1YMR240C RPL7BQ12213 244 aaKnown RBP5.04□□□□□ -1.6
CUS1YMR240C Q0010Q9ZZX9 128 aa5.04□□□□□ -1.6
CUS1YMR240C SEM1O94742 89 aa5.03□□□□□ -1.6
CUS1YMR240C CDC16P09798 840 aa5.03□□□□□ -1.6
CUS1YMR240C SIP1P32578 815 aa5.03□□□□□ -1.6
CUS1YMR240C FUN12P39730 1002 aaKnown RBP5.03□□□□□ -1.6
CUS1YMR240C YEL020CP39994 560 aa5.03□□□□□ -1.6
CUS1YMR240C DJP1P40564 432 aa5.03□□□□□ -1.6
CUS1YMR240C YFL015CP43578 164 aa5.03□□□□□ -1.6
CUS1YMR240C ARC1P46672 376 aaKnown RBP5.03□□□□□ -1.6
CUS1YMR240C BSC5P53755 489 aa5.03□□□□□ -1.6
CUS1YMR240C RAD33Q04231 177 aa5.03□□□□□ -1.6
CUS1YMR240C YPL191CQ08930 360 aa5.03□□□□□ -1.6
CUS1YMR240C NUS1Q12063 375 aa5.03□□□□□ -1.6
CUS1YMR240C BAG7Q12128 409 aa5.03□□□□□ -1.6
CUS1YMR240C MED1Q12321 566 aa5.03□□□□□ -1.6
CUS1YMR240C ENT1Q12518 454 aa5.03□□□□□ -1.6
CUS1YMR240C VCX1Q99385 411 aa5.03□□□□□ -1.6
CUS1YMR240C SAN1P22470 610 aa5.02□□□□□ -1.61
CUS1YMR240C ERG8P24521 451 aa5.02□□□□□ -1.61
CUS1YMR240C SAT4P25333 603 aaKnown RBP5.02□□□□□ -1.61
CUS1YMR240C UGP1P32861 499 aaKnown RBP5.02□□□□□ -1.61
CUS1YMR240C TFC3P34111 1160 aa5.02□□□□□ -1.61
CUS1YMR240C HES1P35843 434 aa5.02□□□□□ -1.61
CUS1YMR240C PSD1P39006 500 aa5.02□□□□□ -1.61
CUS1YMR240C YEL068CP39977 110 aa5.02□□□□□ -1.61
CUS1YMR240C YJR061WP40355 935 aa5.02□□□□□ -1.61
CUS1YMR240C YIL166CP40445 542 aa5.02□□□□□ -1.61
CUS1YMR240C UBP7P40453 1071 aa5.02□□□□□ -1.61
CUS1YMR240C TDA10P42938 290 aa5.02□□□□□ -1.61
CUS1YMR240C STU2P46675 888 aa5.02□□□□□ -1.61
CUS1YMR240C NPA3P47122 385 aa5.02□□□□□ -1.61
CUS1YMR240C UPF3P48412 387 aaKnown RBP5.02□□□□□ -1.61
CUS1YMR240C MRK1P50873 501 aa5.02□□□□□ -1.61
CUS1YMR240C YKU80Q04437 629 aa5.02□□□□□ -1.61
CUS1YMR240C AHA1Q12449 350 aaKnown RBP5.02□□□□□ -1.61
CUS1YMR240C RTP1Q12751 981 aa5.02□□□□□ -1.61
CUS1YMR240C COX1P00401 534 aa5.01□□□□□ -1.61
CUS1YMR240C RRP43P25359 394 aaPredicted RBP5.01□□□□□ -1.61
CUS1YMR240C VBA2P38358 474 aaKnown RBP5.01□□□□□ -1.61
CUS1YMR240C UBX6P47049 396 aa5.01□□□□□ -1.61
CUS1YMR240C YML053CQ04978 212 aa5.01□□□□□ -1.61
CUS1YMR240C IMH1Q06704 911 aaKnown RBP5.01□□□□□ -1.61
CUS1YMR240C SKM1Q12469 655 aa5.01□□□□□ -1.61
CUS1YMR240C AI5_ALPHAQ9ZZX1 630 aa5.01□□□□□ -1.61
CUS1YMR240C AAC3P18238 307 aa5□□□□□ -1.61
CUS1YMR240C RFA2P26754 273 aaKnown RBP5□□□□□ -1.61
CUS1YMR240C YJU2P28320 278 aaPredicted RBP5□□□□□ -1.61
CUS1YMR240C LAC1P28496 418 aa5□□□□□ -1.61
CUS1YMR240C SRB5P32585 307 aa5□□□□□ -1.61
CUS1YMR240C SAP1P39955 897 aaKnown RBP5□□□□□ -1.61
CUS1YMR240C FMP10P40098 244 aa5□□□□□ -1.61
CUS1YMR240C QRI1P43123 477 aaKnown RBP5□□□□□ -1.61
CUS1YMR240C MSY1P48527 492 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms