RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	TAM41	P53230	385 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	YML131W	Q03102	365 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	GTB1	Q04924	702 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	YML053C	Q04978	212 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	MRI1	Q06489	411 aa	Known RBP	4.82	□□□□□ -1.64
NIT3	YLR351C	YPL191C	Q08930	360 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	PNO1	Q99216	274 aa	Known RBP	4.82	□□□□□ -1.64
NIT3	YLR351C	TAD3	Q9URQ3	322 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	AI5_ALPHA	Q9ZZX1	630 aa		4.82	□□□□□ -1.64
NIT3	YLR351C	MYO2	P19524	1574 aa	Known RBP	4.82	□□□□□ -1.64
NIT3	YLR351C	AQY1	P0CD91	305 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
NIT3	YLR351C	RAD16	P31244	790 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	FLO10	P36170	1169 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	IFA38	P38286	347 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	UME6	P39001	836 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	BUD16	P39988	312 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	CIR1	P42940	261 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	YJL043W	P47053	257 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	CTF18	P49956	741 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	IMO32	P53219	342 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	AAT1	Q01802	451 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	PLM2	Q04383	521 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	HRD3	Q05787	833 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	ATG23	Q06671	453 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	VAM6	Q07468	1049 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	Q0010	Q9ZZX9	128 aa		4.81	□□□□□ -1.64
NIT3	YLR351C	SEC3	P33332	1336 aa	Known RBP	4.8	□□□□□ -1.64
NIT3	YLR351C	TPK1	P06244	397 aa		4.8	□□□□□ -1.64
NIT3	YLR351C	RRP43	P25359	394 aa	Predicted RBP	4.8	□□□□□ -1.64
NIT3	YLR351C	APD1	P38281	316 aa		4.8	□□□□□ -1.64
NIT3	YLR351C	VBA2	P38358	474 aa	Known RBP	4.8	□□□□□ -1.64
NIT3	YLR351C	SAP1	P39955	897 aa	Known RBP	4.8	□□□□□ -1.64
NIT3	YLR351C	TFC6	Q06339	672 aa		4.8	□□□□□ -1.64
NIT3	YLR351C	COX17	Q12287	69 aa		4.8	□□□□□ -1.64
NIT3	YLR351C	UFD4	P33202	1483 aa		4.8	□□□□□ -1.64
NIT3	YLR351C	ATP2	P00830	511 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	SNF1	P06782	633 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	SPO16	P17122	198 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	GSY2	P27472	705 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	SSH4	P32343	579 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	RPT3	P33298	428 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	KES1	P35844	434 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	ERC1	P38767	581 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	FUN12	P39730	1002 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	KAP123	P40069	1113 aa	Known RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	TAX4	P47030	604 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	NPA3	P47122	385 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	CSL4	P53859	292 aa	Predicted RBP	4.79	□□□□□ -1.64
NIT3	YLR351C	NDJ1	Q12366	352 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	RPO31	P04051	1460 aa		4.79	□□□□□ -1.64
NIT3	YLR351C	SCC2	Q04002	1493 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	BI2	P03873	423 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	SLC1	P33333	303 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	HES1	P35843	434 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	TEF4	P36008	412 aa	Known RBP	4.78	□□□□□ -1.64
NIT3	YLR351C	RRN3	P36070	627 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	YIL161W	P40449	235 aa	Known RBP	4.78	□□□□□ -1.64
NIT3	YLR351C	DJP1	P40564	432 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	SAE2	P46946	345 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	UBX6	P47049	396 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	BNA1	P47096	177 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	COG1	P53079	417 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	YGR079W	P53249	370 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	YAT1	P80235	687 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	VID22	Q05934	901 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	CYK3	Q07533	885 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	SSP2	Q08646	371 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	OSW1	Q08692	278 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	SWT1	Q12104	458 aa		4.78	□□□□□ -1.64
NIT3	YLR351C	RDL1	Q12305	139 aa	Known RBP	4.78	□□□□□ -1.64
NIT3	YLR351C	COX1	P00401	534 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	SES1	P07284	462 aa	Known RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	YML003W	P0CF16	290 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	HOM2	P13663	365 aa	Known RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	RER1	P25560	188 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	LRE1	P25579	583 aa	Known RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	CUE2	P36075	443 aa	Known RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	HOT13	P36078	116 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	SPN1	Q06505	410 aa	Predicted RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	TRM8	Q12009	286 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	BAG7	Q12128	409 aa		4.77	□□□□□ -1.65
NIT3	YLR351C	PRS5	Q12265	496 aa	Known RBP	4.77	□□□□□ -1.65
NIT3	YLR351C	TY2B-LR1	P0C2J3	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-F	P0CX63	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-GR2	P0CX64	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-C	P25384	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-DR2	Q03494	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY1B-DR1	Q03855	1755 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-OR1	Q12113	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-DR1	Q12472	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2B-OR2	Q12501	1770 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2A-LR1	P0C2J4	438 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2A-F	P0CX61	438 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2A-GR2	P0CX62	438 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	TY2A-C	P25383	438 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	LAC1	P28496	418 aa		4.76	□□□□□ -1.65
NIT3	YLR351C	IST3	P40565	148 aa	Predicted RBP	4.76	□□□□□ -1.65
NIT3	YLR351C	ASE1	P50275	885 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms