RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YOR389WQ08912 624 aa4.44□□□□□ -1.7
SMD3YLR147C RRP6Q12149 733 aaKnown RBP4.44□□□□□ -1.7
SMD3YLR147C YER190C-BP0CX94 160 aa4.43□□□□□ -1.7
SMD3YLR147C YEL077W-AP0CX95 160 aa4.43□□□□□ -1.7
SMD3YLR147C YGR296C-BP0CX96 160 aa4.43□□□□□ -1.7
SMD3YLR147C YPL283W-BP0CX97 160 aa4.43□□□□□ -1.7
SMD3YLR147C YPR204C-AP0CX98 160 aa4.43□□□□□ -1.7
SMD3YLR147C ARP2P32381 391 aaKnown RBP4.43□□□□□ -1.7
SMD3YLR147C SIP1P32578 815 aa4.43□□□□□ -1.7
SMD3YLR147C YHL041WP38730 149 aa4.43□□□□□ -1.7
SMD3YLR147C BUD16P39988 312 aa4.43□□□□□ -1.7
SMD3YLR147C IMA1P53051 589 aa4.43□□□□□ -1.7
SMD3YLR147C TAM41P53230 385 aa4.43□□□□□ -1.7
SMD3YLR147C AAT1Q01802 451 aa4.43□□□□□ -1.7
SMD3YLR147C COX1P00401 534 aa4.42□□□□□ -1.7
SMD3YLR147C GAL4P04386 881 aa4.42□□□□□ -1.7
SMD3YLR147C PTC6P25646 442 aa4.42□□□□□ -1.7
SMD3YLR147C MSH1P25846 959 aa4.42□□□□□ -1.7
SMD3YLR147C URK1P27515 501 aa4.42□□□□□ -1.7
SMD3YLR147C COQ3P27680 312 aa4.42□□□□□ -1.7
SMD3YLR147C HES1P35843 434 aa4.42□□□□□ -1.7
SMD3YLR147C YIL024CP40543 189 aa4.42□□□□□ -1.7
SMD3YLR147C CFD1P40558 293 aa4.42□□□□□ -1.7
SMD3YLR147C YGR079WP53249 370 aa4.42□□□□□ -1.7
SMD3YLR147C ATG21Q02887 496 aa4.42□□□□□ -1.7
SMD3YLR147C CIR2Q08822 631 aa4.42□□□□□ -1.7
SMD3YLR147C YPT1P01123 206 aaKnown RBP4.41□□□□□ -1.7
SMD3YLR147C ILS1P09436 1072 aaKnown RBP4.41□□□□□ -1.7
SMD3YLR147C SEC18P18759 758 aaKnown RBP4.41□□□□□ -1.7
SMD3YLR147C YBR138CP38277 524 aa4.41□□□□□ -1.7
SMD3YLR147C JHD1P40034 492 aa4.41□□□□□ -1.7
SMD3YLR147C MNT3P40549 630 aa4.41□□□□□ -1.7
SMD3YLR147C TAN1P53072 289 aaPredicted RBP4.41□□□□□ -1.7
SMD3YLR147C GTB1Q04924 702 aa4.41□□□□□ -1.7
SMD3YLR147C YOL057WQ08225 711 aa4.41□□□□□ -1.7
SMD3YLR147C LEA1Q08963 238 aaPredicted RBP4.41□□□□□ -1.7
SMD3YLR147C ILV2P07342 687 aaKnown RBP4.4□□□□□ -1.71
SMD3YLR147C LAC1P28496 418 aa4.4□□□□□ -1.71
SMD3YLR147C YPR003CP53394 754 aa4.4□□□□□ -1.71
SMD3YLR147C MPS1P54199 764 aa4.4□□□□□ -1.71
SMD3YLR147C YPL068CQ02749 293 aa4.4□□□□□ -1.71
SMD3YLR147C GET3Q12154 354 aaKnown RBP4.4□□□□□ -1.71
SMD3YLR147C NYV1Q12255 253 aa4.4□□□□□ -1.71
SMD3YLR147C RVB2Q12464 471 aaKnown RBP4.4□□□□□ -1.71
SMD3YLR147C MIS1P09440 975 aaKnown RBP4.39□□□□□ -1.71
SMD3YLR147C PET122P10355 254 aa4.39□□□□□ -1.71
SMD3YLR147C SWC3P31376 625 aa4.39□□□□□ -1.71
SMD3YLR147C PUG1P40100 303 aa4.39□□□□□ -1.71
SMD3YLR147C RPT2P40327 437 aaKnown RBP4.39□□□□□ -1.71
SMD3YLR147C VPS27P40343 622 aaKnown RBP4.39□□□□□ -1.71
SMD3YLR147C PCI8P40512 444 aa4.39□□□□□ -1.71
SMD3YLR147C CDC1P40986 491 aa4.39□□□□□ -1.71
SMD3YLR147C PFA4Q12006 378 aa4.39□□□□□ -1.71
SMD3YLR147C YPR089WO13585 888 aa4.38□□□□□ -1.71
SMD3YLR147C YEF3P16521 1044 aaKnown RBP4.38□□□□□ -1.71
SMD3YLR147C ASK1P35734 292 aa4.38□□□□□ -1.71
SMD3YLR147C FSH1P38777 243 aaKnown RBP4.38□□□□□ -1.71
SMD3YLR147C FLO5P38894 1075 aa4.38□□□□□ -1.71
SMD3YLR147C YJL107CP42947 387 aa4.38□□□□□ -1.71
SMD3YLR147C MSY1P48527 492 aa4.38□□□□□ -1.71
SMD3YLR147C YRB30P53107 440 aaPredicted RBP4.38□□□□□ -1.71
SMD3YLR147C THI3Q07471 609 aa4.38□□□□□ -1.71
SMD3YLR147C FUN12P39730 1002 aaKnown RBP4.37□□□□□ -1.71
SMD3YLR147C ACA1P39970 489 aa4.37□□□□□ -1.71
SMD3YLR147C ORC5P50874 479 aa4.37□□□□□ -1.71
SMD3YLR147C RPL15BP54780 204 aaPredicted RBP4.37□□□□□ -1.71
SMD3YLR147C MTG1Q03151 367 aaPredicted RBP4.37□□□□□ -1.71
SMD3YLR147C YDR109CQ04585 715 aa4.37□□□□□ -1.71
SMD3YLR147C CIA1Q05583 330 aa4.37□□□□□ -1.71
SMD3YLR147C HER1Q12276 1246 aa4.37□□□□□ -1.71
SMD3YLR147C YML003WP0CF16 290 aa4.36□□□□□ -1.71
SMD3YLR147C NCP1P16603 691 aaKnown RBP4.36□□□□□ -1.71
SMD3YLR147C AIM17P23180 465 aaKnown RBP4.36□□□□□ -1.71
SMD3YLR147C CLB4P24871 460 aa4.36□□□□□ -1.71
SMD3YLR147C YCP4P25349 247 aaKnown RBP4.36□□□□□ -1.71
SMD3YLR147C GEX2P36173 615 aa4.36□□□□□ -1.71
SMD3YLR147C ARN1P38731 627 aa4.36□□□□□ -1.71
SMD3YLR147C SPC97P38863 823 aa4.36□□□□□ -1.71
SMD3YLR147C YMR124WP39523 943 aaKnown RBP4.36□□□□□ -1.71
SMD3YLR147C SCW4P53334 386 aaKnown RBP4.36□□□□□ -1.71
SMD3YLR147C TRS130Q03660 1102 aa4.36□□□□□ -1.71
SMD3YLR147C STP3Q05937 343 aa4.36□□□□□ -1.71
SMD3YLR147C PCT1P13259 424 aa4.35□□□□□ -1.71
SMD3YLR147C APA1P16550 321 aaKnown RBP4.35□□□□□ -1.71
SMD3YLR147C CNA1P23287 553 aa4.35□□□□□ -1.71
SMD3YLR147C YSP3P25036 478 aa4.35□□□□□ -1.71
SMD3YLR147C MGM1P32266 881 aa4.35□□□□□ -1.71
SMD3YLR147C RPT3P33298 428 aaKnown RBP4.35□□□□□ -1.71
SMD3YLR147C PHM8P40025 321 aa4.35□□□□□ -1.71
SMD3YLR147C IRC8P47046 822 aa4.35□□□□□ -1.71
SMD3YLR147C UBX6P47049 396 aa4.35□□□□□ -1.71
SMD3YLR147C VAM6Q07468 1049 aa4.35□□□□□ -1.71
SMD3YLR147C BAG7Q12128 409 aa4.35□□□□□ -1.71
SMD3YLR147C RFA2P26754 273 aaKnown RBP4.34□□□□□ -1.71
SMD3YLR147C EXO84P38261 753 aa4.34□□□□□ -1.71
SMD3YLR147C TOM71P38825 639 aaKnown RBP4.34□□□□□ -1.71
SMD3YLR147C SKP2P42843 763 aa4.34□□□□□ -1.71
SMD3YLR147C ZAP1P47043 880 aa4.34□□□□□ -1.71
SMD3YLR147C PAP2P53632 584 aaKnown RBP4.34□□□□□ -1.71
SMD3YLR147C ADE16P54113 591 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms