RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TUF1P02992 437 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C NUC1P08466 329 aa2.58□□□□□ -2
SHE2YKL130C MCM3P24279 971 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C CHS3P29465 1165 aa2.58□□□□□ -2
SHE2YKL130C MCM10P32354 571 aa2.58□□□□□ -2
SHE2YKL130C ATO2P32907 282 aa2.58□□□□□ -2
SHE2YKL130C STT3P39007 718 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C SPC72P39723 622 aa2.58□□□□□ -2
SHE2YKL130C LRO1P40345 661 aa2.58□□□□□ -2
SHE2YKL130C TMA108P40462 946 aa2.58□□□□□ -2
SHE2YKL130C YRB30P53107 440 aaPredicted RBP2.58□□□□□ -2
SHE2YKL130C MDR1P53258 950 aa2.58□□□□□ -2
SHE2YKL130C CPR6P53691 371 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C ESF2P53743 316 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C MRPL13Q02204 264 aa2.58□□□□□ -2
SHE2YKL130C USA1Q03714 838 aa2.58□□□□□ -2
SHE2YKL130C EIS1Q05050 843 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C HRD3Q05787 833 aa2.58□□□□□ -2
SHE2YKL130C ARR3Q06598 404 aa2.58□□□□□ -2
SHE2YKL130C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SHE2YKL130C DIN7Q12086 430 aa2.58□□□□□ -2
SHE2YKL130C RTK1Q12100 620 aaPredicted RBP2.58□□□□□ -2
SHE2YKL130C DBP10Q12389 995 aaKnown RBP2.58□□□□□ -2
SHE2YKL130C RTP1Q12751 981 aa2.58□□□□□ -2
SHE2YKL130C YOR111WQ99210 232 aa2.58□□□□□ -2
SHE2YKL130C MTF2P10849 440 aa2.57□□□□□ -2
SHE2YKL130C YPK1P12688 680 aaKnown RBP2.57□□□□□ -2
SHE2YKL130C SIR1P21691 654 aa2.57□□□□□ -2
SHE2YKL130C YCL049CP25577 312 aa2.57□□□□□ -2
SHE2YKL130C RPT3P33298 428 aaKnown RBP2.57□□□□□ -2
SHE2YKL130C SLC1P33333 303 aa2.57□□□□□ -2
SHE2YKL130C RMA1P36001 430 aaKnown RBP2.57□□□□□ -2
SHE2YKL130C JNM1P36224 373 aa2.57□□□□□ -2
SHE2YKL130C NPR3P38742 1146 aa2.57□□□□□ -2
SHE2YKL130C PUG1P40100 303 aa2.57□□□□□ -2
SHE2YKL130C PSF2P40359 213 aa2.57□□□□□ -2
SHE2YKL130C YIR016WP40572 265 aa2.57□□□□□ -2
SHE2YKL130C IMA5P40884 581 aa2.57□□□□□ -2
SHE2YKL130C LYS20P48570 428 aaKnown RBP2.57□□□□□ -2
SHE2YKL130C YNR071CP53757 342 aa2.57□□□□□ -2
SHE2YKL130C IWR1Q07532 353 aaPredicted RBP2.57□□□□□ -2
SHE2YKL130C CRD1Q07560 283 aa2.57□□□□□ -2
SHE2YKL130C AAD4Q07747 329 aa2.57□□□□□ -2
SHE2YKL130C SRL1Q08673 210 aa2.57□□□□□ -2
SHE2YKL130C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SHE2YKL130C YOL087CQ99247 1116 aa2.57□□□□□ -2
SHE2YKL130C INH1P01097 85 aa2.56□□□□□ -2
SHE2YKL130C URA3P03962 267 aa2.56□□□□□ -2
SHE2YKL130C AAC1P04710 309 aa2.56□□□□□ -2
SHE2YKL130C HMG2P12684 1045 aa2.56□□□□□ -2
SHE2YKL130C POL3P15436 1097 aa2.56□□□□□ -2
SHE2YKL130C PFK2P16862 959 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SHE2YKL130C UBC1P21734 215 aaKnown RBP2.56□□□□□ -2
SHE2YKL130C CLB4P24871 460 aa2.56□□□□□ -2
SHE2YKL130C YCP4P25349 247 aaKnown RBP2.56□□□□□ -2
SHE2YKL130C COQ3P27680 312 aa2.56□□□□□ -2
SHE2YKL130C YJU2P28320 278 aaPredicted RBP2.56□□□□□ -2
SHE2YKL130C IMP2'P32351 346 aa2.56□□□□□ -2
SHE2YKL130C UME6P39001 836 aa2.56□□□□□ -2
SHE2YKL130C YJL193WP39542 402 aa2.56□□□□□ -2
SHE2YKL130C MDV1P47025 714 aa2.56□□□□□ -2
SHE2YKL130C MEP3P53390 489 aa2.56□□□□□ -2
SHE2YKL130C ARC35P53731 342 aaKnown RBP2.56□□□□□ -2
SHE2YKL130C MDM1Q01846 1127 aa2.56□□□□□ -2
SHE2YKL130C ARA2Q04212 335 aa2.56□□□□□ -2
SHE2YKL130C TSR2Q06672 205 aaKnown RBP2.56□□□□□ -2
SHE2YKL130C CYK3Q07533 885 aa2.56□□□□□ -2
SHE2YKL130C NDD1Q08887 554 aa2.56□□□□□ -2
SHE2YKL130C INO80P53115 1489 aa2.56□□□□□ -2
SHE2YKL130C PCK1P10963 549 aa2.55□□□□□ -2
SHE2YKL130C SEC12P11655 471 aa2.55□□□□□ -2
SHE2YKL130C NCP1P16603 691 aaKnown RBP2.55□□□□□ -2
SHE2YKL130C BET2P20133 325 aa2.55□□□□□ -2
SHE2YKL130C ARG1P22768 420 aa2.55□□□□□ -2
SHE2YKL130C RAD16P31244 790 aa2.55□□□□□ -2
SHE2YKL130C MTC7P32633 139 aa2.55□□□□□ -2
SHE2YKL130C GSM1P42950 618 aa2.55□□□□□ -2
SHE2YKL130C SRB7P47822 140 aa2.55□□□□□ -2
SHE2YKL130C YDL183CP48569 320 aa2.55□□□□□ -2
SHE2YKL130C CTF18P49956 741 aa2.55□□□□□ -2
SHE2YKL130C RPL15BP54780 204 aaPredicted RBP2.55□□□□□ -2
SHE2YKL130C ATG21Q02887 496 aa2.55□□□□□ -2
SHE2YKL130C SNU56Q03782 492 aaKnown RBP2.55□□□□□ -2
SHE2YKL130C CSR1Q06705 408 aaKnown RBP2.55□□□□□ -2
SHE2YKL130C YDR056CQ12025 205 aa2.55□□□□□ -2
SHE2YKL130C MED1Q12321 566 aa2.55□□□□□ -2
SHE2YKL130C PNO1Q99216 274 aaKnown RBP2.55□□□□□ -2
SHE2YKL130C CTT1P06115 562 aa2.54□□□□□ -2
SHE2YKL130C BIK1P11709 440 aa2.54□□□□□ -2
SHE2YKL130C VPS33P20795 691 aa2.54□□□□□ -2
SHE2YKL130C AIM17P23180 465 aaKnown RBP2.54□□□□□ -2
SHE2YKL130C FRD1P32614 470 aaKnown RBP2.54□□□□□ -2
SHE2YKL130C MPE1P35728 441 aaKnown RBP2.54□□□□□ -2
SHE2YKL130C SCO2P38072 301 aa2.54□□□□□ -2
SHE2YKL130C FSH1P38777 243 aaKnown RBP2.54□□□□□ -2
SHE2YKL130C MTG2P38860 518 aa2.54□□□□□ -2
SHE2YKL130C VFA1P40080 203 aa2.54□□□□□ -2
SHE2YKL130C CAB2P40506 365 aa2.54□□□□□ -2
SHE2YKL130C IMA1P53051 589 aa2.54□□□□□ -2
SHE2YKL130C BOP3P53958 396 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms