RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	TGL4	P36165	910 aa		11.57	□□□□□ -0.56
CWP1	YKL096W	MRPL40	P36534	297 aa		11.57	□□□□□ -0.56
CWP1	YKL096W	HEM14	P40012	539 aa		11.57	□□□□□ -0.56
CWP1	YKL096W	CCT8	P47079	568 aa	Known RBP	11.57	□□□□□ -0.56
CWP1	YKL096W	CDC14	Q00684	551 aa		11.57	□□□□□ -0.56
CWP1	YKL096W	BUD22	Q04347	519 aa	Known RBP	11.57	□□□□□ -0.56
CWP1	YKL096W	CMS1	Q07897	291 aa	Known RBP	11.57	□□□□□ -0.56
CWP1	YKL096W	SSC1	P0CS90	654 aa	Known RBP	11.56	□□□□□ -0.56
CWP1	YKL096W	SIR1	P21691	654 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	POL12	P38121	705 aa	Predicted RBP	11.56	□□□□□ -0.56
CWP1	YKL096W	REV7	P38927	245 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	EXO1	P39875	702 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	UBP7	P40453	1071 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	BUD13	P46947	266 aa	Predicted RBP	11.56	□□□□□ -0.56
CWP1	YKL096W	TIM13	P53299	105 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	TMN2	Q04562	672 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	LDB18	Q07887	179 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	SLP1	Q12232	587 aa		11.56	□□□□□ -0.56
CWP1	YKL096W	CLN1	P20437	546 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	RAM1	P22007	431 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	MRPL8	P22353	238 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	MIH1	P23748	554 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	VPS41	P38959	992 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	RAD26	P40352	1085 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	BUD20	Q08004	166 aa	Predicted RBP	11.55	□□□□□ -0.56
CWP1	YKL096W	PEX15	Q08215	383 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	YLR046C	Q12253	270 aa		11.55	□□□□□ -0.56
CWP1	YKL096W	PDH1	Q12428	516 aa	Known RBP	11.55	□□□□□ -0.56
CWP1	YKL096W	ARF2	P19146	181 aa	Known RBP	11.54	□□□□□ -0.56
CWP1	YKL096W	BEM3	P32873	1128 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	YBR032W	P38223	100 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	SEO1	P39709	593 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	DSN1	P40568	576 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	TFG1	P41895	735 aa	Predicted RBP	11.54	□□□□□ -0.56
CWP1	YKL096W	YJL107C	P42947	387 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	TRS85	P46944	698 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	IPI3	P53877	555 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	RSC4	Q02206	625 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	NHX1	Q04121	633 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	YSH1	Q06224	779 aa	Predicted RBP	11.54	□□□□□ -0.56
CWP1	YKL096W	VHS3	Q08438	674 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	PEX11	Q12462	236 aa		11.54	□□□□□ -0.56
CWP1	YKL096W	KIN3	P22209	435 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	GDA1	P32621	518 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	GGA2	P38817	585 aa	Known RBP	11.53	□□□□□ -0.56
CWP1	YKL096W	DUN1	P39009	513 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	YTP1	P53584	459 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	BIO4	P53630	237 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	HST2	P53686	357 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	NOP15	P53927	220 aa	Predicted RBP	11.53	□□□□□ -0.56
CWP1	YKL096W	NUP100	Q02629	959 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	CDC123	Q05791	360 aa		11.53	□□□□□ -0.56
CWP1	YKL096W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.52	□□□□□ -0.57	not detected
CWP1	YKL096W	ATP12	P22135	325 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	GEX1	P25596	615 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	COY1	P34237	679 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	GEX2	P36173	615 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	SSP120	P39931	234 aa	Known RBP	11.52	□□□□□ -0.57
CWP1	YKL096W	RSC2	Q06488	889 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	TRE2	Q08693	809 aa		11.52	□□□□□ -0.57
CWP1	YKL096W	SST2	P11972	698 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	DAL81	P21657	970 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	RIM1	P32445	135 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	TYE7	P33122	291 aa	Predicted RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	ALY1	P36117	915 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	MRP21	P38175	177 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	YHI9	P38765	294 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	CRP1	P38845	465 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	DOT6	P40059	670 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	ERG10	P41338	398 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	LIA1	P47120	325 aa	Known RBP	11.51	□□□□□ -0.57
CWP1	YKL096W	AIM14	P53109	570 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	REG1	Q00816	1014 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	PIR1	Q03178	341 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	TRS31	Q03337	283 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	FLC1	Q08967	793 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	YLR053C	Q12026	108 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	DAP1	Q12091	152 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	RMD5	Q12508	421 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	YLR149C	Q99296	730 aa		11.51	□□□□□ -0.57
CWP1	YKL096W	SCH9	P11792	824 aa	Known RBP	11.5	□□□□□ -0.57
CWP1	YKL096W	KEX2	P13134	814 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	HRR25	P29295	494 aa	Known RBP	11.5	□□□□□ -0.57
CWP1	YKL096W	CYM1	P32898	989 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	SWE1	P32944	819 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	RDH54	P38086	958 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	YHR131C	P38835	850 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	MEF2	P39677	819 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	AIM23	P47015	356 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	BUD32	P53323	261 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	ADE12	P80210	433 aa	Known RBP	11.5	□□□□□ -0.57
CWP1	YKL096W	CLP1	Q08685	445 aa	Predicted RBP	11.5	□□□□□ -0.57
CWP1	YKL096W	KCS1	Q12494	1050 aa		11.5	□□□□□ -0.57
CWP1	YKL096W	ERG20	P08524	352 aa	Known RBP	11.49	□□□□□ -0.57
CWP1	YKL096W	YSP3	P25036	478 aa		11.49	□□□□□ -0.57
CWP1	YKL096W	MSH2	P25847	964 aa		11.49	□□□□□ -0.57
CWP1	YKL096W	AEP1	P32493	518 aa		11.49	□□□□□ -0.57
CWP1	YKL096W	LOS1	P33418	1100 aa	Predicted RBP	11.49	□□□□□ -0.57
CWP1	YKL096W	TFA2	P36145	328 aa		11.49	□□□□□ -0.57
CWP1	YKL096W	LIN1	P38852	340 aa	Predicted RBP	11.49	□□□□□ -0.57

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