RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	URH1	Q04179	340 aa		4	□□□□□ -1.77
SPT23	YKL020C	SIL1	Q08199	421 aa		4	□□□□□ -1.77
SPT23	YKL020C	YOR111W	Q99210	232 aa		4	□□□□□ -1.77
SPT23	YKL020C	CBP2	P03874	630 aa	Predicted RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	CHS1	P08004	1131 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	GFA1	P14742	717 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	RET1	P22276	1149 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	URE2	P23202	354 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	ILV6	P25605	309 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	HIR1	P32479	840 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	YBL055C	P34220	418 aa	Predicted RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	YET1	P35723	206 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	ECM21	P38167	1117 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	RCK2	P38623	610 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	SBE22	P38814	852 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	LNP1	P38878	278 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	GDH3	P39708	457 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SPT23	YKL020C	TAF4	P50105	388 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	NUT1	P53114	1132 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	UTP5	Q04177	643 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	HCR1	Q05775	265 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	AFT2	Q08957	416 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	MNL2	Q12205	849 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	MMP1	Q12372	583 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	FAS2	P19097	1887 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	SEM1	O94742	89 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	MET3	P08536	511 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	YCR101C	P25607	182 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	PEP3	P27801	918 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	MEI5	P32489	222 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	FTH1	P38310	465 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	PTC2	P39966	464 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	GIM4	P40005	111 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	SER33	P40510	469 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	QRI1	P43123	477 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	AIM24	P47127	394 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	PSP2	P50109	593 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	PSP1	P50896	841 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	MRPS35	P53292	345 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	BRE5	P53741	515 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	LGE1	Q02796	332 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	PRP42	Q03776	544 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	SSL1	Q04673	461 aa	Predicted RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	YLL007C	Q07799	665 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	SGT1	Q08446	395 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	CHS2	P14180	963 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	VMA16	P23968	213 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	HMX1	P32339	317 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	CLG1	P35190	452 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	RDH54	P38086	958 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	POL12	P38121	705 aa	Predicted RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	ECM31	P38122	312 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	CBR1	P38626	284 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	YRB2	P40517	327 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	RSM7	P47150	247 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	VPS70	P47161	811 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	PIP2	P52960	996 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	ERV25	P54837	211 aa	Known RBP	3.99	□□□□□ -1.77
SPT23	YKL020C	ACS1	Q01574	713 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	GAS4	Q08271	471 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	TRE1	Q08919	783 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	DIN7	Q12086	430 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	EMP46	Q12396	444 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	ATG11	Q12527	1178 aa		3.99	□□□□□ -1.77
SPT23	YKL020C	YLR278C	Q05854	1341 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YLR358C	O13565	187 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	PAT1	P25644	796 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	FRD1	P32614	470 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	MDJ1	P35191	511 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YKR078W	P36158	585 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	RFC3	P38629	340 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	RIM4	P38741	713 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	LRP1	P38801	184 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	CRP1	P38845	465 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	OAF1	P39720	1047 aa	Predicted RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	ARF3	P40994	183 aa	RIP-Chip data	3.98	□□□□□ -1.77	not detected
SPT23	YKL020C	EMW1	P42842	904 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	NAS6	P50086	228 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YGR012W	P53206	393 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	CBK1	P53894	756 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	ADE16	P54113	591 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	ALD6	P54115	500 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	OSH6	Q02201	448 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	YDR514C	Q04408	483 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	GSF2	Q04697	403 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	BSC2	Q05611	235 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	RUP1	Q12242	671 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	TRM11	Q12463	433 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	TMA7	Q3E764	64 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	RPS17A	P02407	136 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	CHO2	P05374	869 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	CAR2	P07991	424 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	RPS17B	P14127	136 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	SEC1	P30619	724 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	YUH1	P35127	236 aa		3.98	□□□□□ -1.77
SPT23	YKL020C	RMA1	P36001	430 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	GRS1	P38088	690 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	GND1	P38720	489 aa	Known RBP	3.98	□□□□□ -1.77
SPT23	YKL020C	YHL050C	P38721	697 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms