RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeastyeast

Gene FIP1, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FIP1YJR093C COX17Q12287 69 aa4.35□□□□□ -1.71
FIP1YJR093C PNO1Q99216 274 aaKnown RBP4.35□□□□□ -1.71
FIP1YJR093C AMD2P22580 549 aa4.34□□□□□ -1.71
FIP1YJR093C SLC1P33333 303 aa4.34□□□□□ -1.71
FIP1YJR093C RRN3P36070 627 aa4.34□□□□□ -1.71
FIP1YJR093C NPR3P38742 1146 aa4.34□□□□□ -1.71
FIP1YJR093C VPS8P39702 1274 aa4.34□□□□□ -1.71
FIP1YJR093C XBP1P40489 647 aa4.34□□□□□ -1.71
FIP1YJR093C FAF1P40546 346 aaPredicted RBP4.34□□□□□ -1.71
FIP1YJR093C ZAP1P47043 880 aa4.34□□□□□ -1.71
FIP1YJR093C BPL1P48445 690 aaPredicted RBP4.34□□□□□ -1.71
FIP1YJR093C YPL108WQ02872 168 aaPredicted RBP4.34□□□□□ -1.71
FIP1YJR093C SEG1Q04279 960 aa4.34□□□□□ -1.71
FIP1YJR093C AHA1Q12449 350 aaKnown RBP4.34□□□□□ -1.71
FIP1YJR093C YER175W-AQ8TGU4 54 aa4.34□□□□□ -1.71
FIP1YJR093C YMR084WA2P2R3 262 aa4.33□□□□□ -1.72
FIP1YJR093C MBR1P23493 339 aa4.33□□□□□ -1.72
FIP1YJR093C YJU2P28320 278 aaPredicted RBP4.33□□□□□ -1.72
FIP1YJR093C GDA1P32621 518 aa4.33□□□□□ -1.72
FIP1YJR093C MTG2P38860 518 aa4.33□□□□□ -1.72
FIP1YJR093C PSP1P50896 841 aaKnown RBP4.33□□□□□ -1.72
FIP1YJR093C UBP16Q02863 499 aa4.33□□□□□ -1.72
FIP1YJR093C VPS72Q03388 795 aa4.33□□□□□ -1.72
FIP1YJR093C RAD33Q04231 177 aa4.33□□□□□ -1.72
FIP1YJR093C Q0010Q9ZZX9 128 aa4.33□□□□□ -1.72
FIP1YJR093C TPK1P06244 397 aa4.32□□□□□ -1.72
FIP1YJR093C URK1P27515 501 aa4.32□□□□□ -1.72
FIP1YJR093C MRPL36P36531 177 aa4.32□□□□□ -1.72
FIP1YJR093C LNP1P38878 278 aa4.32□□□□□ -1.72
FIP1YJR093C RAD26P40352 1085 aa4.32□□□□□ -1.72
FIP1YJR093C TDA10P42938 290 aa4.32□□□□□ -1.72
FIP1YJR093C SAE2P46946 345 aa4.32□□□□□ -1.72
FIP1YJR093C COG1P53079 417 aa4.32□□□□□ -1.72
FIP1YJR093C ATP23P53722 227 aa4.32□□□□□ -1.72
FIP1YJR093C VAM6Q07468 1049 aa4.32□□□□□ -1.72
FIP1YJR093C RER1P25560 188 aa4.31□□□□□ -1.72
FIP1YJR093C RAD16P31244 790 aa4.31□□□□□ -1.72
FIP1YJR093C KAP123P40069 1113 aaKnown RBP4.31□□□□□ -1.72
FIP1YJR093C DPH1P40487 425 aaKnown RBP4.31□□□□□ -1.72
FIP1YJR093C YGR079WP53249 370 aa4.31□□□□□ -1.72
FIP1YJR093C TDA9Q04545 1251 aa4.31□□□□□ -1.72
FIP1YJR093C SNO4Q04902 237 aa4.31□□□□□ -1.72
FIP1YJR093C YML053CQ04978 212 aa4.31□□□□□ -1.72
FIP1YJR093C HRD3Q05787 833 aa4.31□□□□□ -1.72
FIP1YJR093C YDL242WQ07746 117 aa4.31□□□□□ -1.72
FIP1YJR093C HSP33Q08914 237 aaKnown RBP4.31□□□□□ -1.72
FIP1YJR093C HSP32Q08992 237 aa4.31□□□□□ -1.72
FIP1YJR093C YDR056CQ12025 205 aa4.31□□□□□ -1.72
FIP1YJR093C YOL087CQ99247 1116 aa4.31□□□□□ -1.72
FIP1YJR093C ATP2P00830 511 aaKnown RBP4.3□□□□□ -1.72
FIP1YJR093C TY2A-LR1P0C2J4 438 aa4.3□□□□□ -1.72
FIP1YJR093C TY2A-FP0CX61 438 aa4.3□□□□□ -1.72
FIP1YJR093C TY2A-GR2P0CX62 438 aa4.3□□□□□ -1.72
FIP1YJR093C PFK2P16862 959 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
FIP1YJR093C TY2A-CP25383 438 aa4.3□□□□□ -1.72
FIP1YJR093C TEF4P36008 412 aaKnown RBP4.3□□□□□ -1.72
FIP1YJR093C UME6P39001 836 aa4.3□□□□□ -1.72
FIP1YJR093C PSD1P39006 500 aa4.3□□□□□ -1.72
FIP1YJR093C BUD16P39988 312 aa4.3□□□□□ -1.72
FIP1YJR093C YER010CP40011 234 aa4.3□□□□□ -1.72
FIP1YJR093C MNT3P40549 630 aa4.3□□□□□ -1.72
FIP1YJR093C CSL4P53859 292 aaPredicted RBP4.3□□□□□ -1.72
FIP1YJR093C TY2A-DR2Q03483 438 aa4.3□□□□□ -1.72
FIP1YJR093C YMR018WQ04364 514 aa4.3□□□□□ -1.72
FIP1YJR093C CRT10Q08226 957 aa4.3□□□□□ -1.72
FIP1YJR093C TY2A-BQ12260 438 aa4.3□□□□□ -1.72
FIP1YJR093C PRS5Q12265 496 aaKnown RBP4.3□□□□□ -1.72
FIP1YJR093C TY2A-OR2Q12293 438 aa4.3□□□□□ -1.72
FIP1YJR093C RDL1Q12305 139 aaKnown RBP4.3□□□□□ -1.72
FIP1YJR093C TY2A-DR1Q12392 438 aa4.3□□□□□ -1.72
FIP1YJR093C TY2A-OR1Q12439 438 aa4.3□□□□□ -1.72
FIP1YJR093C TY2A-DR3Q99303 438 aa4.3□□□□□ -1.72
FIP1YJR093C PDE1P22434 369 aa4.29□□□□□ -1.72
FIP1YJR093C PTP1P25044 335 aa4.29□□□□□ -1.72
FIP1YJR093C RRP43P25359 394 aaPredicted RBP4.29□□□□□ -1.72
FIP1YJR093C GCD7P32502 381 aaPredicted RBP4.29□□□□□ -1.72
FIP1YJR093C RPT3P33298 428 aaKnown RBP4.29□□□□□ -1.72
FIP1YJR093C MUD2P36084 527 aaKnown RBP4.29□□□□□ -1.72
FIP1YJR093C GEX2P36173 615 aa4.29□□□□□ -1.72
FIP1YJR093C NAB3P38996 802 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
FIP1YJR093C OPT1P40897 799 aa4.29□□□□□ -1.72
FIP1YJR093C SKP2P42843 763 aa4.29□□□□□ -1.72
FIP1YJR093C BNA3P47039 444 aaKnown RBP4.29□□□□□ -1.72
FIP1YJR093C NPA3P47122 385 aa4.29□□□□□ -1.72
FIP1YJR093C REG1Q00816 1014 aa4.29□□□□□ -1.72
FIP1YJR093C MTG1Q03151 367 aaPredicted RBP4.29□□□□□ -1.72
FIP1YJR093C OPY2Q06810 360 aa4.29□□□□□ -1.72
FIP1YJR093C CYK3Q07533 885 aa4.29□□□□□ -1.72
FIP1YJR093C LCB4Q12246 624 aa4.29□□□□□ -1.72
FIP1YJR093C YBR255C-AQ3E776 120 aa4.29□□□□□ -1.72
FIP1YJR093C CHO2P05374 869 aaKnown RBP4.28□□□□□ -1.72
FIP1YJR093C YML003WP0CF16 290 aa4.28□□□□□ -1.72
FIP1YJR093C GFD2P25370 566 aaKnown RBP4.28□□□□□ -1.72
FIP1YJR093C CHS3P29465 1165 aa4.28□□□□□ -1.72
FIP1YJR093C SWC3P31376 625 aa4.28□□□□□ -1.72
FIP1YJR093C CNS1P33313 385 aa4.28□□□□□ -1.72
FIP1YJR093C ERC1P38767 581 aa4.28□□□□□ -1.72
FIP1YJR093C SAP1P39955 897 aaKnown RBP4.28□□□□□ -1.72
FIP1YJR093C MAM1P40065 302 aa4.28□□□□□ -1.72
FIP1YJR093C CBK1P53894 756 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms