RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C EMC2P47133 292 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C RSM24Q03976 319 aa8.81□□□□□ -1
SSL2YIL143C RAD30Q04049 632 aa8.81□□□□□ -1
SSL2YIL143C NDL1Q06568 189 aa8.81□□□□□ -1
SSL2YIL143C CDA1Q06702 301 aa8.81□□□□□ -1
SSL2YIL143C UBR2Q07963 1872 aa8.81□□□□□ -1
SSL2YIL143C SPE1P08432 466 aa8.81□□□□□ -1
SSL2YIL143C SNF4P12904 322 aa8.81□□□□□ -1
SSL2YIL143C VBA3P25594 458 aa8.81□□□□□ -1
SSL2YIL143C PRR1P28708 518 aa8.81□□□□□ -1
SSL2YIL143C HRR25P29295 494 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C CDC3P32457 520 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C VBA5P36172 582 aa8.81□□□□□ -1
SSL2YIL143C CCT7P42943 550 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C ALT1P52893 592 aa8.81□□□□□ -1
SSL2YIL143C YGR283CP53336 341 aaPredicted RBP8.81□□□□□ -1
SSL2YIL143C YMR226CQ05016 267 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C GLO2Q05584 274 aa8.81□□□□□ -1
SSL2YIL143C DIS3Q08162 1001 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C TY4B-PA0A0B7P3V8 1104 aa8.8□□□□□ -1
SSL2YIL143C HSC82P15108 705 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C RPS5P26783 225 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C NGG1P32494 702 aa8.8□□□□□ -1
SSL2YIL143C HSP78P33416 811 aa8.8□□□□□ -1
SSL2YIL143C UTP11P34247 250 aaPredicted RBP8.8□□□□□ -1
SSL2YIL143C ABZ1P37254 787 aaPredicted RBP8.8□□□□□ -1
SSL2YIL143C KAP104P38217 918 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C OTU2P38747 307 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C GEM1P39722 662 aa8.8□□□□□ -1
SSL2YIL143C ASN2P49090 572 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C YGR117CP53270 476 aa8.8□□□□□ -1
SSL2YIL143C YGR127WP53275 312 aa8.8□□□□□ -1
SSL2YIL143C SLD5Q03406 294 aa8.8□□□□□ -1
SSL2YIL143C MCM21Q06675 368 aa8.8□□□□□ -1
SSL2YIL143C FMP25Q08023 583 aa8.8□□□□□ -1
SSL2YIL143C VPS54Q12071 889 aa8.8□□□□□ -1
SSL2YIL143C REC8Q12188 680 aa8.8□□□□□ -1
SSL2YIL143C GCY1P14065 312 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
SSL2YIL143C YDJ1P25491 409 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C RPT5P33297 434 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C NOP4P37838 685 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C YMC2P38087 329 aa8.8□□□□□ -1
SSL2YIL143C YRB1P41920 201 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C BFA1P47113 574 aa8.8□□□□□ -1
SSL2YIL143C RPS7BP48164 190 aaKnown RBP8.8□□□□□ -1
SSL2YIL143C BUD32P53323 261 aa8.8□□□□□ -1
SSL2YIL143C YPR003CP53394 754 aa8.8□□□□□ -1
SSL2YIL143C YNL108CP53929 270 aa8.8□□□□□ -1
SSL2YIL143C YMR155WQ03795 547 aa8.8□□□□□ -1
SSL2YIL143C CSN9Q03981 162 aa8.8□□□□□ -1
SSL2YIL143C ECM7Q06200 448 aa8.8□□□□□ -1
SSL2YIL143C SEC15P22224 910 aa8.79□□□□□ -1
SSL2YIL143C MSH2P25847 964 aa8.79□□□□□ -1
SSL2YIL143C DPH2P32461 534 aa8.79□□□□□ -1
SSL2YIL143C GDA1P32621 518 aa8.79□□□□□ -1
SSL2YIL143C TFB1P32776 642 aa8.79□□□□□ -1
SSL2YIL143C ASK1P35734 292 aa8.79□□□□□ -1
SSL2YIL143C HSL7P38274 827 aa8.79□□□□□ -1
SSL2YIL143C TDP1P38319 544 aa8.79□□□□□ -1
SSL2YIL143C UTP9P38882 575 aaKnown RBP8.79□□□□□ -1
SSL2YIL143C FET4P40988 552 aa8.79□□□□□ -1
SSL2YIL143C RRT5P43607 289 aa8.79□□□□□ -1
SSL2YIL143C GET1P53192 235 aa8.79□□□□□ -1
SSL2YIL143C CST9Q06032 482 aa8.79□□□□□ -1
SSL2YIL143C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SSL2YIL143C PSY3Q12318 242 aa8.79□□□□□ -1
SSL2YIL143C PER1P25625 357 aa8.79□□□□□ -1
SSL2YIL143C PTP2P29461 750 aa8.79□□□□□ -1
SSL2YIL143C PCF11P39081 626 aaPredicted RBP8.79□□□□□ -1
SSL2YIL143C MND2P40577 368 aa8.79□□□□□ -1
SSL2YIL143C ULI1P43604 169 aa8.79□□□□□ -1
SSL2YIL143C YGR054WP53235 642 aaKnown RBP8.79□□□□□ -1
SSL2YIL143C YDR239CQ03780 787 aa8.79□□□□□ -1
SSL2YIL143C CDC123Q05791 360 aa8.79□□□□□ -1
SSL2YIL143C ATG20Q07528 640 aa8.79□□□□□ -1
SSL2YIL143C YPR027CQ12079 277 aa8.79□□□□□ -1
SSL2YIL143C CSR2Q12734 1121 aa8.79□□□□□ -1
SSL2YIL143C HSH49Q99181 213 aaPredicted RBP8.79□□□□□ -1
SSL2YIL143C TRX2P22803 104 aaKnown RBP8.78□□□□□ -1
SSL2YIL143C AIM26P32858 118 aa8.78□□□□□ -1
SSL2YIL143C PEX6P33760 1030 aa8.78□□□□□ -1
SSL2YIL143C LYS9P38999 446 aa8.78□□□□□ -1
SSL2YIL143C RIC1P40395 1056 aa8.78□□□□□ -1
SSL2YIL143C PRM2P40534 656 aa8.78□□□□□ -1
SSL2YIL143C VMA13P41807 478 aaKnown RBP8.78□□□□□ -1
SSL2YIL143C AIF1P52923 378 aa8.78□□□□□ -1
SSL2YIL143C ECM29P38737 1868 aa8.78□□□□□ -1
SSL2YIL143C SAT4P25333 603 aaKnown RBP8.78□□□□□ -1
SSL2YIL143C MRPL32P25348 183 aa8.78□□□□□ -1
SSL2YIL143C TPO5P36029 618 aa8.78□□□□□ -1
SSL2YIL143C SPO71Q03868 1245 aa8.78□□□□□ -1
SSL2YIL143C SEC10Q06245 871 aa8.78□□□□□ -1
SSL2YIL143C PSR1Q07800 427 aa8.78□□□□□ -1
SSL2YIL143C GAL2P13181 574 aa8.77□□□□□ -1.01
SSL2YIL143C CMP2P14747 604 aa8.77□□□□□ -1.01
SSL2YIL143C AEP1P32493 518 aa8.77□□□□□ -1.01
SSL2YIL143C IXR1P33417 597 aa8.77□□□□□ -1.01
SSL2YIL143C MDJ1P35191 511 aa8.77□□□□□ -1.01
SSL2YIL143C OCT1P35999 772 aa8.77□□□□□ -1.01
SSL2YIL143C DBP7P36120 742 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms