RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W AAD15Q08361 143 aa5.78□□□□□ -1.48
SMF2YHR050W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
SMF2YHR050W SPE3Q12074 293 aaKnown RBP5.78□□□□□ -1.48
SMF2YHR050W SUT2Q12286 268 aa5.78□□□□□ -1.48
SMF2YHR050W RPL24AP04449 155 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W MSB1P21339 1137 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W NPP1P25353 742 aa5.77□□□□□ -1.49
SMF2YHR050W UTR2P32623 467 aa5.77□□□□□ -1.49
SMF2YHR050W SEC6P32844 805 aa5.77□□□□□ -1.49
SMF2YHR050W AST1P35183 429 aa5.77□□□□□ -1.49
SMF2YHR050W YBR053CP38235 358 aa5.77□□□□□ -1.49
SMF2YHR050W OTU2P38747 307 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W LAM1P38851 1228 aa5.77□□□□□ -1.49
SMF2YHR050W STN1P38960 494 aa5.77□□□□□ -1.49
SMF2YHR050W PRM9P39551 298 aa5.77□□□□□ -1.49
SMF2YHR050W INP51P40559 946 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W MPH1P40562 993 aa5.77□□□□□ -1.49
SMF2YHR050W VTC4P47075 721 aa5.77□□□□□ -1.49
SMF2YHR050W KTR6P54070 446 aa5.77□□□□□ -1.49
SMF2YHR050W ASI1P54074 624 aa5.77□□□□□ -1.49
SMF2YHR050W SLU7Q02775 382 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W INA17Q02888 182 aa5.77□□□□□ -1.49
SMF2YHR050W RCR2Q03446 210 aaKnown RBP5.77□□□□□ -1.49
SMF2YHR050W FMN1Q03778 218 aa5.77□□□□□ -1.49
SMF2YHR050W ATG17Q06410 417 aa5.77□□□□□ -1.49
SMF2YHR050W DDC1Q08949 612 aa5.77□□□□□ -1.49
SMF2YHR050W REC8Q12188 680 aa5.77□□□□□ -1.49
SMF2YHR050W RUP1Q12242 671 aa5.77□□□□□ -1.49
SMF2YHR050W TAF3Q12297 353 aa5.77□□□□□ -1.49
SMF2YHR050W KCS1Q12494 1050 aa5.77□□□□□ -1.49
SMF2YHR050W NOT5Q12514 560 aaPredicted RBP5.77□□□□□ -1.49
SMF2YHR050W MOD5P07884 428 aa5.76□□□□□ -1.49
SMF2YHR050W PMI40P29952 429 aaKnown RBP5.76□□□□□ -1.49
SMF2YHR050W SLA2P33338 968 aa5.76□□□□□ -1.49
SMF2YHR050W RDH54P38086 958 aa5.76□□□□□ -1.49
SMF2YHR050W PPE1P38796 400 aa5.76□□□□□ -1.49
SMF2YHR050W CRP1P38845 465 aaKnown RBP5.76□□□□□ -1.49
SMF2YHR050W RAD55P38953 406 aa5.76□□□□□ -1.49
SMF2YHR050W YAT2P40017 923 aa5.76□□□□□ -1.49
SMF2YHR050W AIM20P40451 204 aa5.76□□□□□ -1.49
SMF2YHR050W DPH1P40487 425 aaKnown RBP5.76□□□□□ -1.49
SMF2YHR050W YFL012WP43580 148 aa5.76□□□□□ -1.49
SMF2YHR050W ARC1P46672 376 aaKnown RBP5.76□□□□□ -1.49
SMF2YHR050W FMP33P46998 180 aa5.76□□□□□ -1.49
SMF2YHR050W MRM2P53123 320 aa5.76□□□□□ -1.49
SMF2YHR050W TAF11Q04226 346 aa5.76□□□□□ -1.49
SMF2YHR050W GPM2Q12008 311 aa5.76□□□□□ -1.49
SMF2YHR050W NBP2Q12163 236 aa5.76□□□□□ -1.49
SMF2YHR050W PAB1P04147 577 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49 RIP-Chip
SMF2YHR050W FUB1P25659 250 aa5.75□□□□□ -1.49
SMF2YHR050W HRR25P29295 494 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W RAD16P31244 790 aa5.75□□□□□ -1.49
SMF2YHR050W RIM1P32445 135 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W YSC84P32793 468 aa5.75□□□□□ -1.49
SMF2YHR050W CYM1P32898 989 aa5.75□□□□□ -1.49
SMF2YHR050W TKL2P33315 681 aa5.75□□□□□ -1.49
SMF2YHR050W SEC66P33754 206 aa5.75□□□□□ -1.49
SMF2YHR050W RRP14P36080 434 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W RIM2P38127 377 aa5.75□□□□□ -1.49
SMF2YHR050W PDS1P40316 373 aaPredicted RBP5.75□□□□□ -1.49
SMF2YHR050W PSF2P40359 213 aa5.75□□□□□ -1.49
SMF2YHR050W ESL1P40456 1118 aa5.75□□□□□ -1.49
SMF2YHR050W RPL34BP40525 121 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W CDC1P40986 491 aa5.75□□□□□ -1.49
SMF2YHR050W MAF1P41910 395 aa5.75□□□□□ -1.49
SMF2YHR050W TAF1P46677 1066 aa5.75□□□□□ -1.49
SMF2YHR050W SET2P46995 733 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W NCS6P53088 359 aa5.75□□□□□ -1.49
SMF2YHR050W NUT1P53114 1132 aa5.75□□□□□ -1.49
SMF2YHR050W USE1P53146 245 aa5.75□□□□□ -1.49
SMF2YHR050W SPC98P53540 846 aa5.75□□□□□ -1.49
SMF2YHR050W IST1P53843 298 aaPredicted RBP5.75□□□□□ -1.49
SMF2YHR050W YNL058CP53947 316 aa5.75□□□□□ -1.49
SMF2YHR050W RPM2Q02773 1202 aa5.75□□□□□ -1.49
SMF2YHR050W ACL4Q03771 387 aa5.75□□□□□ -1.49
SMF2YHR050W ESC8Q08119 714 aa5.75□□□□□ -1.49
SMF2YHR050W RRP36Q12481 300 aaPredicted RBP5.75□□□□□ -1.49
SMF2YHR050W YOR131CQ12486 218 aa5.75□□□□□ -1.49
SMF2YHR050W RGS2Q99188 309 aa5.75□□□□□ -1.49
SMF2YHR050W ENO1P00924 437 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W CIT2P08679 460 aa5.75□□□□□ -1.49
SMF2YHR050W YAK1P14680 807 aa5.75□□□□□ -1.49
SMF2YHR050W SNT1P25357 1226 aa5.75□□□□□ -1.49
SMF2YHR050W YCL068CP25593 260 aa5.75□□□□□ -1.49
SMF2YHR050W PAT1P25644 796 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W HEM12P32347 362 aaPredicted RBP5.75□□□□□ -1.49
SMF2YHR050W RPS0AP32905 252 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W RRN3P36070 627 aa5.75□□□□□ -1.49
SMF2YHR050W SRL3P36167 246 aa5.75□□□□□ -1.49
SMF2YHR050W MRPL7P36519 292 aa5.75□□□□□ -1.49
SMF2YHR050W TSC10P38342 320 aa5.75□□□□□ -1.49
SMF2YHR050W PHO89P38361 574 aa5.75□□□□□ -1.49
SMF2YHR050W ETP1P38748 585 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W FSH1P38777 243 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W TVP23P38962 199 aa5.75□□□□□ -1.49
SMF2YHR050W NUP60P39705 539 aa5.75□□□□□ -1.49
SMF2YHR050W FRT2P39734 528 aa5.75□□□□□ -1.49
SMF2YHR050W FIR1P40020 876 aa5.75□□□□□ -1.49
SMF2YHR050W RLP7P40693 322 aaKnown RBP5.75□□□□□ -1.49
SMF2YHR050W YJL132WP47014 750 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms