RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	YFR018C	P43599	363 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	NUP85	P46673	744 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	SEH1	P53011	349 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	HXT15	P54854	567 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	PET117	Q02771	107 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	EAF1	Q06337	982 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	LOT6	Q07923	191 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	TRE1	Q08919	783 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	MCD1	Q12158	566 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	MAM3	Q12296	706 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	HMS1	Q12398	434 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	CBF1	P17106	351 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	RAD14	P28519	371 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	MRS6	P32864	603 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	KTR4	P38131	464 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	ELP2	P42935	788 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	UPF3	P48412	387 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	BSC2	Q05611	235 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	BRE4	Q07660	1125 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	YEH1	Q07804	573 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	RTR2	Q12378	196 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	ADE5,7	P07244	802 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	ARG82	P07250	355 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	STE12	P13574	688 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	STF2	P16965	84 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	RDS2	P19541	446 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	CBP3	P21560	335 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	ATG22	P25568	528 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	AAD3	P25612	363 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	DAL80	P26343	269 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	CYM1	P32898	989 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	DSS1	P39112	969 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	PIG2	P40187	538 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YJL016W	P47072	561 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	MAD3	P47074	515 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	DAM1	P53267	343 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YNL115C	P53925	644 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	NIS1	P53939	407 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	REC102	Q02721	264 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	IRC4	Q03036	179 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	CLU1	Q03690	1277 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	PRP42	Q03776	544 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	FMN1	Q03778	218 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	IVY1	Q04934	453 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	GMC2	Q06201	188 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	MHR1	Q06630	226 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	FLC1	Q08967	793 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	GTT2	Q12390	233 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	TRP2	P00899	507 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	PHO4	P07270	312 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	PRP5	P21372	849 aa	Predicted RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	DMC1	P25453	334 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	RRN3	P36070	627 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YBR225W	P38321	900 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YHR078W	P38799	552 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	SBE22	P38814	852 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	PTC2	P39966	464 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	LCP5	P40079	357 aa	Predicted RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	FET5	P43561	622 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	RAI1	P53063	387 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	VHS1	Q03785	461 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	TDA9	Q04545	1251 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	ARP10	Q04549	284 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	PEX10	Q05568	337 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	SWA2	Q06677	668 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	DIB1	Q06819	143 aa	Predicted RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	ADF1	Q2V2Q1	113 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	PBS2	P08018	668 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	PTP2	P29461	750 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	TFC1	P32367	649 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	HIR1	P32479	840 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	NUP2	P32499	720 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	PDR3	P33200	976 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	LRG1	P35688	1017 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	CUE2	P36075	443 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	ABZ1	P37254	787 aa	Predicted RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	STL1	P39932	569 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	UBP7	P40453	1071 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YGL117W	P53133	265 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	COG5	P53951	403 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	YMR187C	Q03236	431 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	COQ9	Q05779	260 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	ADE13	Q05911	482 aa	Known RBP	4.63	□□□□□ -1.67
MDR1	YGR100W	CRN1	Q06440	651 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	MCH5	Q08777	521 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	ATG31	Q12421	196 aa		4.63	□□□□□ -1.67
MDR1	YGR100W	THS1	P04801	734 aa	Known RBP	4.62	□□□□□ -1.67
MDR1	YGR100W	PHO81	P17442	1178 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	MRPL8	P22353	238 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	SAN1	P22470	610 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	YSC84	P32793	468 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	TAF14	P35189	244 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	TSC10	P38342	320 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	GIC1	P38785	314 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	SAH1	P39954	449 aa	Known RBP	4.62	□□□□□ -1.67
MDR1	YGR100W	YAT2	P40017	923 aa		4.62	□□□□□ -1.67
MDR1	YGR100W	ERG10	P41338	398 aa	Known RBP	4.62	□□□□□ -1.67
MDR1	YGR100W	YJR141W	P47172	347 aa	Predicted RBP	4.62	□□□□□ -1.67
MDR1	YGR100W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms