RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YCL049CP25577 312 aa7.42□□□□□ -1.22
LCP5YER127W CDC5P32562 705 aa7.42□□□□□ -1.22
LCP5YER127W YPT10P38146 199 aa7.42□□□□□ -1.22
LCP5YER127W ASN1P49089 572 aaKnown RBP7.42□□□□□ -1.22
LCP5YER127W SAP4P53036 818 aa7.42□□□□□ -1.22
LCP5YER127W GTR1Q00582 310 aa7.42□□□□□ -1.22
LCP5YER127W WHI2P12611 486 aa7.41□□□□□ -1.22
LCP5YER127W YCR061WP25639 631 aa7.41□□□□□ -1.22
LCP5YER127W PSY4P38193 441 aa7.41□□□□□ -1.22
LCP5YER127W COQ6P53318 479 aa7.41□□□□□ -1.22
LCP5YER127W YML131WQ03102 365 aa7.41□□□□□ -1.22
LCP5YER127W TRS130Q03660 1102 aa7.41□□□□□ -1.22
LCP5YER127W YBT1P32386 1661 aa7.41□□□□□ -1.22
LCP5YER127W RPA135P22138 1203 aaKnown RBP7.4□□□□□ -1.22
LCP5YER127W SWC3P31376 625 aa7.4□□□□□ -1.22
LCP5YER127W EMP70P32802 667 aa7.4□□□□□ -1.22
LCP5YER127W MUP3P38734 546 aa7.4□□□□□ -1.22
LCP5YER127W FSH1P38777 243 aaKnown RBP7.4□□□□□ -1.22
LCP5YER127W IMA1P53051 589 aa7.4□□□□□ -1.22
LCP5YER127W MSL5Q12186 476 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
LCP5YER127W HAP1P0CE41 1502 aa7.4□□□□□ -1.22
LCP5YER127W CPA2P03965 1118 aaKnown RBP7.39□□□□□ -1.23
LCP5YER127W RNR3P21672 869 aaKnown RBP7.39□□□□□ -1.23
LCP5YER127W MRPL9P31334 269 aa7.39□□□□□ -1.23
LCP5YER127W GCD7P32502 381 aaPredicted RBP7.39□□□□□ -1.23
LCP5YER127W XRS2P33301 854 aa7.39□□□□□ -1.23
LCP5YER127W MTG2P38860 518 aa7.39□□□□□ -1.23
LCP5YER127W CPR8P53728 308 aa7.39□□□□□ -1.23
LCP5YER127W SUB1P54000 292 aaKnown RBP7.39□□□□□ -1.23
LCP5YER127W GFD1Q04839 188 aaKnown RBP7.39□□□□□ -1.23
LCP5YER127W SUL2Q12325 893 aa7.39□□□□□ -1.23
LCP5YER127W AAC1P04710 309 aa7.38□□□□□ -1.23
LCP5YER127W PET122P10355 254 aa7.38□□□□□ -1.23
LCP5YER127W SKP2P42843 763 aa7.38□□□□□ -1.23
LCP5YER127W YGL117WP53133 265 aa7.38□□□□□ -1.23
LCP5YER127W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
LCP5YER127W YER175W-AQ8TGU4 54 aa7.38□□□□□ -1.23
LCP5YER127W MTF2P10849 440 aa7.37□□□□□ -1.23
LCP5YER127W PFK2P16862 959 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
LCP5YER127W UBC1P21734 215 aaKnown RBP7.37□□□□□ -1.23
LCP5YER127W NPR3P38742 1146 aa7.37□□□□□ -1.23
LCP5YER127W ARO9P38840 513 aaPredicted RBP7.37□□□□□ -1.23
LCP5YER127W RPN13O13563 156 aa7.36□□□□□ -1.23
LCP5YER127W SPO11P23179 398 aa7.36□□□□□ -1.23
LCP5YER127W SAT4P25333 603 aaKnown RBP7.36□□□□□ -1.23
LCP5YER127W SSH4P32343 579 aa7.36□□□□□ -1.23
LCP5YER127W IFA38P38286 347 aa7.36□□□□□ -1.23
LCP5YER127W YEL020CP39994 560 aa7.36□□□□□ -1.23
LCP5YER127W YIL166CP40445 542 aa7.36□□□□□ -1.23
LCP5YER127W BST1P43571 1029 aa7.36□□□□□ -1.23
LCP5YER127W ZAP1P47043 880 aa7.36□□□□□ -1.23
LCP5YER127W CRT10Q08226 957 aa7.36□□□□□ -1.23
LCP5YER127W TY1B-NL2Q99337 1749 aaKnown RBP7.35□□□□□ -1.23
LCP5YER127W BIK1P11709 440 aa7.35□□□□□ -1.23
LCP5YER127W RAD16P31244 790 aa7.35□□□□□ -1.23
LCP5YER127W UME6P39001 836 aa7.35□□□□□ -1.23
LCP5YER127W APM1Q00776 475 aaPredicted RBP7.35□□□□□ -1.23
LCP5YER127W UBP16Q02863 499 aa7.35□□□□□ -1.23
LCP5YER127W WAR1Q03631 944 aa7.35□□□□□ -1.23
LCP5YER127W GIS1Q03833 894 aa7.35□□□□□ -1.23
LCP5YER127W SUT2Q12286 268 aa7.35□□□□□ -1.23
LCP5YER127W COX17Q12287 69 aa7.35□□□□□ -1.23
LCP5YER127W PNO1Q99216 274 aaKnown RBP7.35□□□□□ -1.23
LCP5YER127W UGP1P32861 499 aaKnown RBP7.34□□□□□ -1.23
LCP5YER127W SLC1P33333 303 aa7.34□□□□□ -1.23
LCP5YER127W VID27P40157 782 aa7.34□□□□□ -1.23
LCP5YER127W RAD26P40352 1085 aa7.34□□□□□ -1.23
LCP5YER127W CSR1Q06705 408 aaKnown RBP7.34□□□□□ -1.23
LCP5YER127W SSP2Q08646 371 aa7.34□□□□□ -1.23
LCP5YER127W MAM1P40065 302 aa7.33□□□□□ -1.24
LCP5YER127W QRI1P43123 477 aaKnown RBP7.33□□□□□ -1.24
LCP5YER127W TAM41P53230 385 aa7.33□□□□□ -1.24
LCP5YER127W YNL092WP53934 400 aa7.33□□□□□ -1.24
LCP5YER127W YML119WQ03208 357 aa7.33□□□□□ -1.24
LCP5YER127W TPK1P06244 397 aa7.32□□□□□ -1.24
LCP5YER127W ADE5,7P07244 802 aaKnown RBP7.32□□□□□ -1.24
LCP5YER127W PDE1P22434 369 aa7.32□□□□□ -1.24
LCP5YER127W AMD2P22580 549 aa7.32□□□□□ -1.24
LCP5YER127W YMC1P32331 307 aa7.32□□□□□ -1.24
LCP5YER127W NUP120P35729 1037 aa7.32□□□□□ -1.24
LCP5YER127W LAS21P40367 830 aa7.32□□□□□ -1.24
LCP5YER127W ARG7Q04728 441 aa7.32□□□□□ -1.24
LCP5YER127W RVB2Q12464 471 aaKnown RBP7.32□□□□□ -1.24
LCP5YER127W USO1P25386 1790 aa7.31□□□□□ -1.24
LCP5YER127W SNF1P06782 633 aaKnown RBP7.31□□□□□ -1.24
LCP5YER127W AAD3P25612 363 aa7.31□□□□□ -1.24
LCP5YER127W SIP1P32578 815 aa7.31□□□□□ -1.24
LCP5YER127W GDA1P32621 518 aa7.31□□□□□ -1.24
LCP5YER127W KAP123P40069 1113 aaKnown RBP7.31□□□□□ -1.24
LCP5YER127W YFL015CP43578 164 aa7.31□□□□□ -1.24
LCP5YER127W MTG1Q03151 367 aaPredicted RBP7.31□□□□□ -1.24
LCP5YER127W YML053CQ04978 212 aa7.31□□□□□ -1.24
LCP5YER127W YDL121CQ07541 149 aa7.31□□□□□ -1.24
LCP5YER127W ULA1Q12059 462 aa7.31□□□□□ -1.24
LCP5YER127W AHA1Q12449 350 aaKnown RBP7.31□□□□□ -1.24
LCP5YER127W PCD1Q12524 340 aa7.31□□□□□ -1.24
LCP5YER127W RPL7AP05737 244 aaKnown RBP7.3□□□□□ -1.24
LCP5YER127W TEF4P36008 412 aaKnown RBP7.3□□□□□ -1.24
LCP5YER127W RRN3P36070 627 aa7.3□□□□□ -1.24
LCP5YER127W BNA1P47096 177 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms