RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	GIC1	P38785	314 aa		4.23	□□□□□ -1.73
SLX8	YER116C	SSZ1	P38788	538 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	QNS1	P38795	714 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	PEX18	P38855	283 aa		4.23	□□□□□ -1.73
SLX8	YER116C	BEM4	P39011	633 aa		4.23	□□□□□ -1.73
SLX8	YER116C	DOT5	P40553	215 aa		4.23	□□□□□ -1.73
SLX8	YER116C	YKE2	P52553	114 aa		4.23	□□□□□ -1.73
SLX8	YER116C	COG1	P53079	417 aa		4.23	□□□□□ -1.73
SLX8	YER116C	BRE5	P53741	515 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	PDR16	P53860	351 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	REG1	Q00816	1014 aa		4.23	□□□□□ -1.73
SLX8	YER116C	MAK10	Q02197	733 aa		4.23	□□□□□ -1.73
SLX8	YER116C	SMD2	Q06217	110 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	AAD4	Q07747	329 aa		4.23	□□□□□ -1.73
SLX8	YER116C	ALG6	Q12001	544 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	YOR022C	Q12204	715 aa		4.23	□□□□□ -1.73
SLX8	YER116C	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
SLX8	YER116C	CTF3	Q12748	733 aa		4.23	□□□□□ -1.73
SLX8	YER116C	CET1	O13297	549 aa	Predicted RBP	4.22	□□□□□ -1.73
SLX8	YER116C	CPR2	P23285	205 aa		4.22	□□□□□ -1.73
SLX8	YER116C	PHO91	P27514	894 aa		4.22	□□□□□ -1.73
SLX8	YER116C	MF(ALPHA)2	P32435	120 aa		4.22	□□□□□ -1.73
SLX8	YER116C	FRD1	P32614	470 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	SRP101	P32916	621 aa		4.22	□□□□□ -1.73
SLX8	YER116C	LRG1	P35688	1017 aa		4.22	□□□□□ -1.73
SLX8	YER116C	YKT6	P36015	200 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	UBP11	P36026	717 aa		4.22	□□□□□ -1.73
SLX8	YER116C	RPC37	P36121	282 aa		4.22	□□□□□ -1.73
SLX8	YER116C	YSW1	P38280	609 aa		4.22	□□□□□ -1.73
SLX8	YER116C	COS111	P38308	924 aa		4.22	□□□□□ -1.73
SLX8	YER116C	ETP1	P38748	585 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	AIM10	P39965	576 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	CAB2	P40506	365 aa		4.22	□□□□□ -1.73
SLX8	YER116C	PKP1	P40530	394 aa		4.22	□□□□□ -1.73
SLX8	YER116C	CEP3	P40969	608 aa		4.22	□□□□□ -1.73
SLX8	YER116C	YFL054C	P43549	646 aa		4.22	□□□□□ -1.73
SLX8	YER116C	IMA1	P53051	589 aa		4.22	□□□□□ -1.73
SLX8	YER116C	CUE3	P53137	624 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	DSE4	P53753	1117 aa		4.22	□□□□□ -1.73
SLX8	YER116C	MEC3	Q02574	474 aa		4.22	□□□□□ -1.73
SLX8	YER116C	LEE1	Q02799	301 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	ROY1	Q04847	553 aa		4.22	□□□□□ -1.73
SLX8	YER116C	MRD1	Q06106	887 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	YPS7	Q06325	596 aa		4.22	□□□□□ -1.73
SLX8	YER116C	SOG2	Q08817	791 aa		4.22	□□□□□ -1.73
SLX8	YER116C	LYS21	Q12122	440 aa	Known RBP	4.22	□□□□□ -1.73
SLX8	YER116C	HOS1	Q12214	470 aa		4.22	□□□□□ -1.73
SLX8	YER116C	YOR019W	Q99248	730 aa		4.22	□□□□□ -1.73
SLX8	YER116C	URA3	P03962	267 aa		4.21	□□□□□ -1.74
SLX8	YER116C	RPB2	P08518	1224 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	RPL5	P26321	297 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	SPC110	P32380	944 aa		4.21	□□□□□ -1.74
SLX8	YER116C	DPH5	P32469	300 aa	Predicted RBP	4.21	□□□□□ -1.74
SLX8	YER116C	SRB2	P34162	210 aa		4.21	□□□□□ -1.74
SLX8	YER116C	KTR3	P38130	404 aa	Predicted RBP	4.21	□□□□□ -1.74
SLX8	YER116C	YHR033W	P38690	423 aa		4.21	□□□□□ -1.74
SLX8	YER116C	RRM3	P38766	723 aa		4.21	□□□□□ -1.74
SLX8	YER116C	YDR089W	P38966	869 aa		4.21	□□□□□ -1.74
SLX8	YER116C	YIL089W	P40500	205 aa		4.21	□□□□□ -1.74
SLX8	YER116C	IST3	P40565	148 aa	Predicted RBP	4.21	□□□□□ -1.74
SLX8	YER116C	BST1	P43571	1029 aa		4.21	□□□□□ -1.74
SLX8	YER116C	ENP2	P48234	707 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	GLO1	P50107	326 aa		4.21	□□□□□ -1.74
SLX8	YER116C	ALT2	P52892	507 aa		4.21	□□□□□ -1.74
SLX8	YER116C	LCL3	P53153	274 aa		4.21	□□□□□ -1.74
SLX8	YER116C	ABZ2	Q03266	374 aa		4.21	□□□□□ -1.74
SLX8	YER116C	ARX1	Q03862	593 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	SSL1	Q04673	461 aa	Predicted RBP	4.21	□□□□□ -1.74
SLX8	YER116C	TRI1	Q05024	226 aa		4.21	□□□□□ -1.74
SLX8	YER116C	RSA3	Q05942	220 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	KAP95	Q06142	861 aa	Known RBP	4.21	□□□□□ -1.74
SLX8	YER116C	THI22	Q06490	572 aa		4.21	□□□□□ -1.74
SLX8	YER116C	ISN1	Q99312	450 aa		4.21	□□□□□ -1.74
SLX8	YER116C	MRP10	O75012	95 aa		4.2	□□□□□ -1.74
SLX8	YER116C	TY2A-LR1	P0C2J4	438 aa		4.2	□□□□□ -1.74
SLX8	YER116C	TY2A-F	P0CX61	438 aa		4.2	□□□□□ -1.74
SLX8	YER116C	TY2A-GR2	P0CX62	438 aa		4.2	□□□□□ -1.74
SLX8	YER116C	DAP2	P18962	818 aa		4.2	□□□□□ -1.74
SLX8	YER116C	TY2A-C	P25383	438 aa		4.2	□□□□□ -1.74
SLX8	YER116C	RME1	P32338	300 aa	Known RBP	4.2	□□□□□ -1.74
SLX8	YER116C	DOA4	P32571	926 aa		4.2	□□□□□ -1.74
SLX8	YER116C	AKL1	P38080	1108 aa	Known RBP	4.2	□□□□□ -1.74
SLX8	YER116C	UBP13	P38187	747 aa		4.2	□□□□□ -1.74
SLX8	YER116C	YBL028C	P38202	106 aa		4.2	□□□□□ -1.74
SLX8	YER116C	YHL017W	P38745	532 aa		4.2	□□□□□ -1.74
SLX8	YER116C	WSS1	P38838	269 aa		4.2	□□□□□ -1.74
SLX8	YER116C	REV7	P38927	245 aa		4.2	□□□□□ -1.74
SLX8	YER116C	RGI2	P40188	164 aa		4.2	□□□□□ -1.74
SLX8	YER116C	RRT14	P40470	206 aa		4.2	□□□□□ -1.74
SLX8	YER116C	BUD8	P41698	603 aa		4.2	□□□□□ -1.74
SLX8	YER116C	INP52	P50942	1183 aa		4.2	□□□□□ -1.74
SLX8	YER116C	EXG2	P52911	562 aa		4.2	□□□□□ -1.74
SLX8	YER116C	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
SLX8	YER116C	GIM3	P53900	129 aa		4.2	□□□□□ -1.74
SLX8	YER116C	SRT1	Q03175	343 aa		4.2	□□□□□ -1.74
SLX8	YER116C	TY2A-DR2	Q03483	438 aa		4.2	□□□□□ -1.74
SLX8	YER116C	MRPL1	Q04599	285 aa		4.2	□□□□□ -1.74
SLX8	YER116C	ECM18	Q04623	453 aa		4.2	□□□□□ -1.74
SLX8	YER116C	RCO1	Q04779	684 aa		4.2	□□□□□ -1.74
SLX8	YER116C	CRD1	Q07560	283 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms