RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	RCO1	Q04779	684 aa		5.76	□□□□□ -1.49
PCL6	YER059W	GFD1	Q04839	188 aa	Known RBP	5.76	□□□□□ -1.49
PCL6	YER059W	STP3	Q05937	343 aa		5.76	□□□□□ -1.49
PCL6	YER059W	ATG23	Q06671	453 aa		5.76	□□□□□ -1.49
PCL6	YER059W	CRT10	Q08226	957 aa		5.76	□□□□□ -1.49
PCL6	YER059W	SWT1	Q12104	458 aa		5.76	□□□□□ -1.49
PCL6	YER059W	MRP7	P12687	371 aa		5.75	□□□□□ -1.49
PCL6	YER059W	PRE8	P23639	250 aa		5.75	□□□□□ -1.49
PCL6	YER059W	SIP1	P32578	815 aa		5.75	□□□□□ -1.49
PCL6	YER059W	UBS1	P38290	277 aa		5.75	□□□□□ -1.49
PCL6	YER059W	MTG2	P38860	518 aa		5.75	□□□□□ -1.49
PCL6	YER059W	MAM1	P40065	302 aa		5.75	□□□□□ -1.49
PCL6	YER059W	GTB1	Q04924	702 aa		5.75	□□□□□ -1.49
PCL6	YER059W	HUA2	Q12134	243 aa		5.75	□□□□□ -1.49
PCL6	YER059W	ZPS1	Q12512	249 aa		5.75	□□□□□ -1.49
PCL6	YER059W	YOR111W	Q99210	232 aa		5.75	□□□□□ -1.49
PCL6	YER059W	CDC24	P11433	854 aa	Predicted RBP	5.74	□□□□□ -1.49
PCL6	YER059W	WHI2	P12611	486 aa		5.74	□□□□□ -1.49
PCL6	YER059W	CDC43	P18898	376 aa		5.74	□□□□□ -1.49
PCL6	YER059W	ERG8	P24521	451 aa		5.74	□□□□□ -1.49
PCL6	YER059W	MRP20	P32387	263 aa		5.74	□□□□□ -1.49
PCL6	YER059W	TDP1	P38319	544 aa		5.74	□□□□□ -1.49
PCL6	YER059W	FUN12	P39730	1002 aa	Known RBP	5.74	□□□□□ -1.49
PCL6	YER059W	LAS21	P40367	830 aa		5.74	□□□□□ -1.49
PCL6	YER059W	PFK26	P40433	827 aa	Known RBP	5.74	□□□□□ -1.49
PCL6	YER059W	ARC1	P46672	376 aa	Known RBP	5.74	□□□□□ -1.49
PCL6	YER059W	TMN2	Q04562	672 aa		5.74	□□□□□ -1.49
PCL6	YER059W	IMH1	Q06704	911 aa	Known RBP	5.74	□□□□□ -1.49
PCL6	YER059W	CMK1	P27466	446 aa	Known RBP	5.73	□□□□□ -1.49
PCL6	YER059W	RPF2	P36160	344 aa	Known RBP	5.73	□□□□□ -1.49
PCL6	YER059W	NOP4	P37838	685 aa	Known RBP	5.73	□□□□□ -1.49
PCL6	YER059W	YPT10	P38146	199 aa		5.73	□□□□□ -1.49
PCL6	YER059W	BUD16	P39988	312 aa		5.73	□□□□□ -1.49
PCL6	YER059W	SIP4	P46954	829 aa		5.73	□□□□□ -1.49
PCL6	YER059W	STB4	P50104	949 aa		5.73	□□□□□ -1.49
PCL6	YER059W	IMO32	P53219	342 aa		5.73	□□□□□ -1.49
PCL6	YER059W	RBG2	P53295	368 aa	Known RBP	5.73	□□□□□ -1.49
PCL6	YER059W	COQ6	P53318	479 aa		5.73	□□□□□ -1.49
PCL6	YER059W	UBP16	Q02863	499 aa		5.73	□□□□□ -1.49
PCL6	YER059W	SDH5	Q08230	162 aa		5.73	□□□□□ -1.49
PCL6	YER059W	RPB2	P08518	1224 aa	Known RBP	5.72	□□□□□ -1.49
PCL6	YER059W	KGD2	P19262	463 aa	Predicted RBP	5.72	□□□□□ -1.49
PCL6	YER059W	KIN3	P22209	435 aa		5.72	□□□□□ -1.49
PCL6	YER059W	DMC1	P25453	334 aa		5.72	□□□□□ -1.49
PCL6	YER059W	LRE1	P25579	583 aa	Known RBP	5.72	□□□□□ -1.49
PCL6	YER059W	MRPL9	P31334	269 aa		5.72	□□□□□ -1.49
PCL6	YER059W	TFC3	P34111	1160 aa		5.72	□□□□□ -1.49
PCL6	YER059W	KTR3	P38130	404 aa	Predicted RBP	5.72	□□□□□ -1.49
PCL6	YER059W	PSD1	P39006	500 aa		5.72	□□□□□ -1.49
PCL6	YER059W	UBP7	P40453	1071 aa		5.72	□□□□□ -1.49
PCL6	YER059W	UBX6	P47049	396 aa		5.72	□□□□□ -1.49
PCL6	YER059W	YGR079W	P53249	370 aa		5.72	□□□□□ -1.49
PCL6	YER059W	SPC19	Q03954	165 aa		5.72	□□□□□ -1.49
PCL6	YER059W	YDL242W	Q07746	117 aa		5.72	□□□□□ -1.49
PCL6	YER059W	RNR3	P21672	869 aa	Known RBP	5.71	□□□□□ -1.5
PCL6	YER059W	CDC15	P27636	974 aa		5.71	□□□□□ -1.5
PCL6	YER059W	SAC6	P32599	642 aa	Known RBP	5.71	□□□□□ -1.5
PCL6	YER059W	ESL2	P36168	1195 aa		5.71	□□□□□ -1.5
PCL6	YER059W	YBL029W	P38201	376 aa		5.71	□□□□□ -1.5
PCL6	YER059W	DJP1	P40564	432 aa		5.71	□□□□□ -1.5
PCL6	YER059W	CCT7	P42943	550 aa	Known RBP	5.71	□□□□□ -1.5
PCL6	YER059W	COG2	P53271	262 aa		5.71	□□□□□ -1.5
PCL6	YER059W	MRI1	Q06489	411 aa	Known RBP	5.71	□□□□□ -1.5
PCL6	YER059W	TAF3	Q12297	353 aa		5.71	□□□□□ -1.5
PCL6	YER059W	YBR126W-A	Q8TGU7	68 aa		5.71	□□□□□ -1.5
PCL6	YER059W	VCX1	Q99385	411 aa		5.71	□□□□□ -1.5
PCL6	YER059W	CPA2	P03965	1118 aa	Known RBP	5.7	□□□□□ -1.5
PCL6	YER059W	CHO2	P05374	869 aa	Known RBP	5.7	□□□□□ -1.5
PCL6	YER059W	ALY1	P36117	915 aa		5.7	□□□□□ -1.5
PCL6	YER059W	YMC2	P38087	329 aa		5.7	□□□□□ -1.5
PCL6	YER059W	AAT1	Q01802	451 aa		5.7	□□□□□ -1.5
PCL6	YER059W	YML119W	Q03208	357 aa		5.7	□□□□□ -1.5
PCL6	YER059W	VIP1	Q06685	1146 aa	Known RBP	5.7	□□□□□ -1.5
PCL6	YER059W	ENT4	Q07872	247 aa		5.7	□□□□□ -1.5
PCL6	YER059W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
PCL6	YER059W	LYS21	Q12122	440 aa	Known RBP	5.7	□□□□□ -1.5
PCL6	YER059W	TAH18	Q12181	623 aa		5.7	□□□□□ -1.5
PCL6	YER059W	TPK2	P06245	380 aa		5.69	□□□□□ -1.5
PCL6	YER059W	SEC53	P07283	254 aa	Known RBP	5.69	□□□□□ -1.5
PCL6	YER059W	YML003W	P0CF16	290 aa		5.69	□□□□□ -1.5
PCL6	YER059W	AMD2	P22580	549 aa		5.69	□□□□□ -1.5
PCL6	YER059W	SDS3	P40505	327 aa		5.69	□□□□□ -1.5
PCL6	YER059W	QRI1	P43123	477 aa	Known RBP	5.69	□□□□□ -1.5
PCL6	YER059W	DUO1	P53168	247 aa	Known RBP	5.69	□□□□□ -1.5
PCL6	YER059W	CPR8	P53728	308 aa		5.69	□□□□□ -1.5
PCL6	YER059W	YNL092W	P53934	400 aa		5.69	□□□□□ -1.5
PCL6	YER059W	YSA1	Q01976	231 aa		5.69	□□□□□ -1.5
PCL6	YER059W	MUB1	Q03162	620 aa		5.69	□□□□□ -1.5
PCL6	YER059W	FCP1	Q03254	732 aa		5.69	□□□□□ -1.5
PCL6	YER059W	WAR1	Q03631	944 aa		5.69	□□□□□ -1.5
PCL6	YER059W	GIR2	Q03768	265 aa	Predicted RBP	5.69	□□□□□ -1.5
PCL6	YER059W	RAD30	Q04049	632 aa		5.69	□□□□□ -1.5
PCL6	YER059W	YKU80	Q04437	629 aa		5.69	□□□□□ -1.5
PCL6	YER059W	YML053C	Q04978	212 aa		5.69	□□□□□ -1.5
PCL6	YER059W	PRS5	Q12265	496 aa	Known RBP	5.69	□□□□□ -1.5
PCL6	YER059W	COX1	P00401	534 aa		5.68	□□□□□ -1.5
PCL6	YER059W	RPL19A	P0CX82	189 aa	Known RBP	5.68	□□□□□ -1.5
PCL6	YER059W	RPL19B	P0CX83	189 aa	Predicted RBP	5.68	□□□□□ -1.5
PCL6	YER059W	MET8	P15807	274 aa		5.68	□□□□□ -1.5
PCL6	YER059W	RFA2	P26754	273 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms