RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C PGC1Q08959 321 aa1.4□□□□□ -2.18
SEC3YER008C PNS1Q12412 539 aa1.4□□□□□ -2.18
SEC3YER008C RVB2Q12464 471 aaKnown RBP1.4□□□□□ -2.18
SEC3YER008C RTP1Q12751 981 aa1.4□□□□□ -2.18
SEC3YER008C ARG3P05150 338 aa1.4□□□□□ -2.19
SEC3YER008C SWI6P09959 803 aa1.4□□□□□ -2.19
SEC3YER008C APE1P14904 514 aa1.4□□□□□ -2.19
SEC3YER008C HOP1P20050 605 aa1.4□□□□□ -2.19
SEC3YER008C ARG1P22768 420 aa1.4□□□□□ -2.19
SEC3YER008C PEX2P32800 271 aa1.4□□□□□ -2.19
SEC3YER008C RMA1P36001 430 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C EMP65P40085 556 aa1.4□□□□□ -2.19
SEC3YER008C THI6P41835 540 aa1.4□□□□□ -2.19
SEC3YER008C IDS2P46958 469 aa1.4□□□□□ -2.19
SEC3YER008C YNR061CP53747 219 aa1.4□□□□□ -2.19
SEC3YER008C YNR071CP53757 342 aa1.4□□□□□ -2.19
SEC3YER008C MTD1Q02046 320 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C PRP42Q03776 544 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C AIM32Q04689 311 aa1.4□□□□□ -2.19
SEC3YER008C IMH1Q06704 911 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C CPA2P03965 1118 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C RED1P14291 827 aa1.4□□□□□ -2.19
SEC3YER008C RNR1P21524 888 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C MCM3P24279 971 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C YKR018CP36114 725 aa1.4□□□□□ -2.19
SEC3YER008C SSZ1P38788 538 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C YEL057CP39983 233 aa1.4□□□□□ -2.19
SEC3YER008C RPS0BP46654 252 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C SGM1P47166 707 aa1.4□□□□□ -2.19
SEC3YER008C YKE2P52553 114 aa1.4□□□□□ -2.19
SEC3YER008C DUO1P53168 247 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C FMP30Q02883 468 aa1.4□□□□□ -2.19
SEC3YER008C PML1Q07930 204 aaPredicted RBP1.4□□□□□ -2.19
SEC3YER008C PSR2Q07949 397 aa1.4□□□□□ -2.19
SEC3YER008C YOL073CQ08232 322 aa1.4□□□□□ -2.19
SEC3YER008C THI21Q08975 551 aa1.4□□□□□ -2.19
SEC3YER008C FRE6Q12473 712 aa1.4□□□□□ -2.19
SEC3YER008C FAS2P19097 1887 aaKnown RBP1.4□□□□□ -2.19
SEC3YER008C DUR1,2P32528 1835 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C STE11P23561 717 aa1.39□□□□□ -2.19
SEC3YER008C KRR1P25586 316 aaPredicted RBP1.39□□□□□ -2.19
SEC3YER008C POL4P25615 582 aa1.39□□□□□ -2.19
SEC3YER008C FUB1P25659 250 aa1.39□□□□□ -2.19
SEC3YER008C RPS7AP26786 190 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C ERG3P32353 365 aa1.39□□□□□ -2.19
SEC3YER008C TGL1P34163 548 aa1.39□□□□□ -2.19
SEC3YER008C LST4P34239 828 aa1.39□□□□□ -2.19
SEC3YER008C APL3P38065 1025 aa1.39□□□□□ -2.19
SEC3YER008C RIC1P40395 1056 aa1.39□□□□□ -2.19
SEC3YER008C SKP2P42843 763 aa1.39□□□□□ -2.19
SEC3YER008C MRX6P48564 524 aa1.39□□□□□ -2.19
SEC3YER008C LYS4P49367 693 aaPredicted RBP1.39□□□□□ -2.19
SEC3YER008C TAF4P50105 388 aa1.39□□□□□ -2.19
SEC3YER008C MNT2P53059 558 aa1.39□□□□□ -2.19
SEC3YER008C NCS6P53088 359 aa1.39□□□□□ -2.19
SEC3YER008C SUN4P53616 420 aa1.39□□□□□ -2.19
SEC3YER008C YSA1Q01976 231 aa1.39□□□□□ -2.19
SEC3YER008C MRPL13Q02204 264 aa1.39□□□□□ -2.19
SEC3YER008C RAD30Q04049 632 aa1.39□□□□□ -2.19
SEC3YER008C HEL2Q05580 639 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C MCM21Q06675 368 aa1.39□□□□□ -2.19
SEC3YER008C CHS5Q12114 671 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C PAR32Q12515 295 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C PHO5P00635 467 aa1.39□□□□□ -2.19
SEC3YER008C LAT1P12695 482 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C IME1P21190 360 aa1.39□□□□□ -2.19
SEC3YER008C SGF29P25554 259 aa1.39□□□□□ -2.19
SEC3YER008C YCL049CP25577 312 aa1.39□□□□□ -2.19
SEC3YER008C ERV1P27882 189 aa1.39□□□□□ -2.19
SEC3YER008C BRF1P29056 596 aa1.39□□□□□ -2.19
SEC3YER008C SIP1P32578 815 aa1.39□□□□□ -2.19
SEC3YER008C GCS1P35197 352 aa1.39□□□□□ -2.19
SEC3YER008C PXL1P36166 706 aa1.39□□□□□ -2.19
SEC3YER008C KSP1P38691 1029 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C YHR112CP38716 378 aa1.39□□□□□ -2.19
SEC3YER008C UME6P39001 836 aa1.39□□□□□ -2.19
SEC3YER008C NDC80P40460 691 aa1.39□□□□□ -2.19
SEC3YER008C ENP2P48234 707 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C PAN2P53010 1115 aaPredicted RBP1.39□□□□□ -2.19
SEC3YER008C RIA1P53893 1110 aa1.39□□□□□ -2.19
SEC3YER008C ORC3P54790 616 aa1.39□□□□□ -2.19
SEC3YER008C HOF1Q05080 669 aa1.39□□□□□ -2.19
SEC3YER008C GET3Q12154 354 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C VAS1P07806 1104 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C TPM1P17536 199 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C PRP4P20053 465 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C IMP2'P32351 346 aa1.39□□□□□ -2.19
SEC3YER008C ANP1P32629 500 aa1.39□□□□□ -2.19
SEC3YER008C PPQ1P32945 549 aa1.39□□□□□ -2.19
SEC3YER008C ELF1P36053 145 aa1.39□□□□□ -2.19
SEC3YER008C GLG1P36143 616 aa1.39□□□□□ -2.19
SEC3YER008C PIH1P38768 344 aa1.39□□□□□ -2.19
SEC3YER008C STL1P39932 569 aa1.39□□□□□ -2.19
SEC3YER008C JHD1P40034 492 aa1.39□□□□□ -2.19
SEC3YER008C KAP123P40069 1113 aaKnown RBP1.39□□□□□ -2.19
SEC3YER008C BUD8P41698 603 aa1.39□□□□□ -2.19
SEC3YER008C IRC6P43615 237 aa1.39□□□□□ -2.19
SEC3YER008C YNL058CP53947 316 aa1.39□□□□□ -2.19
SEC3YER008C ABZ2Q03266 374 aa1.39□□□□□ -2.19
SEC3YER008C NTO1Q12311 748 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms