RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W VPS64Q03944 604 aa3.73□□□□□ -1.81
RSM28YDR494W HIM1Q06674 414 aa3.73□□□□□ -1.81
RSM28YDR494W SNA4Q07549 140 aa3.73□□□□□ -1.81
RSM28YDR494W LCB4Q12246 624 aa3.73□□□□□ -1.81
RSM28YDR494W ILS1P09436 1072 aaKnown RBP3.72□□□□□ -1.81
RSM28YDR494W SAP1P39955 897 aaKnown RBP3.72□□□□□ -1.81
RSM28YDR494W NOP2P40991 618 aaKnown RBP3.72□□□□□ -1.81
RSM28YDR494W UBP16Q02863 499 aa3.72□□□□□ -1.81
RSM28YDR494W PLM2Q04383 521 aa3.72□□□□□ -1.81
RSM28YDR494W CRF1Q04930 467 aa3.72□□□□□ -1.81
RSM28YDR494W LYS21Q12122 440 aaKnown RBP3.72□□□□□ -1.81
RSM28YDR494W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
RSM28YDR494W YCR061WP25639 631 aa3.71□□□□□ -1.82
RSM28YDR494W MSH1P25846 959 aa3.71□□□□□ -1.82
RSM28YDR494W APM3P38153 483 aa3.71□□□□□ -1.82
RSM28YDR494W GND1P38720 489 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W STT3P39007 718 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W CCT4P39078 528 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W YAT2P40017 923 aa3.71□□□□□ -1.82
RSM28YDR494W ARB1P40024 610 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W VPS27P40343 622 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W YIR016WP40572 265 aa3.71□□□□□ -1.82
RSM28YDR494W MOT3P54785 490 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W YOR389WQ08912 624 aa3.71□□□□□ -1.82
RSM28YDR494W ATX2Q12067 313 aa3.71□□□□□ -1.82
RSM28YDR494W RRP6Q12149 733 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W GET3Q12154 354 aaKnown RBP3.71□□□□□ -1.82
RSM28YDR494W YER175W-AQ8TGU4 54 aa3.71□□□□□ -1.82
RSM28YDR494W MSS18P08593 268 aa3.7□□□□□ -1.82
RSM28YDR494W CAB2P40506 365 aa3.7□□□□□ -1.82
RSM28YDR494W BRE1Q07457 700 aaKnown RBP3.7□□□□□ -1.82
RSM28YDR494W NDD1Q08887 554 aa3.7□□□□□ -1.82
RSM28YDR494W PIF1P07271 859 aa3.69□□□□□ -1.82
RSM28YDR494W POL3P15436 1097 aa3.69□□□□□ -1.82
RSM28YDR494W SIR1P21691 654 aa3.69□□□□□ -1.82
RSM28YDR494W YHL041WP38730 149 aa3.69□□□□□ -1.82
RSM28YDR494W TOM71P38825 639 aaKnown RBP3.69□□□□□ -1.82
RSM28YDR494W ARO9P38840 513 aaPredicted RBP3.69□□□□□ -1.82
RSM28YDR494W YIL152WP40455 235 aa3.69□□□□□ -1.82
RSM28YDR494W ESF2P53743 316 aaKnown RBP3.69□□□□□ -1.82
RSM28YDR494W BOP3P53958 396 aa3.69□□□□□ -1.82
RSM28YDR494W AAT1Q01802 451 aa3.69□□□□□ -1.82
RSM28YDR494W ARA2Q04212 335 aa3.69□□□□□ -1.82
RSM28YDR494W YML053CQ04978 212 aa3.69□□□□□ -1.82
RSM28YDR494W AIM6Q07716 390 aa3.69□□□□□ -1.82
RSM28YDR494W YDL242WQ07746 117 aa3.69□□□□□ -1.82
RSM28YDR494W PFA4Q12006 378 aa3.69□□□□□ -1.82
RSM28YDR494W UBX3Q12229 455 aa3.69□□□□□ -1.82
RSM28YDR494W PHO81P17442 1178 aa3.68□□□□□ -1.82
RSM28YDR494W SEC18P18759 758 aaKnown RBP3.68□□□□□ -1.82
RSM28YDR494W KGD2P19262 463 aaPredicted RBP3.68□□□□□ -1.82
RSM28YDR494W RIT1P23796 513 aa3.68□□□□□ -1.82
RSM28YDR494W MCM3P24279 971 aaKnown RBP3.68□□□□□ -1.82
RSM28YDR494W FRD1P32614 470 aaKnown RBP3.68□□□□□ -1.82
RSM28YDR494W ERV46P39727 415 aa3.68□□□□□ -1.82
RSM28YDR494W PAP2P53632 584 aaKnown RBP3.68□□□□□ -1.82
RSM28YDR494W VTC3Q02725 835 aa3.68□□□□□ -1.82
RSM28YDR494W YPL108WQ02872 168 aaPredicted RBP3.68□□□□□ -1.82
RSM28YDR494W IWR1Q07532 353 aaPredicted RBP3.68□□□□□ -1.82
RSM28YDR494W ICL2Q12031 575 aa3.68□□□□□ -1.82
RSM28YDR494W SES1P07284 462 aaKnown RBP3.67□□□□□ -1.82
RSM28YDR494W MIS1P09440 975 aaKnown RBP3.67□□□□□ -1.82
RSM28YDR494W ATG21Q02887 496 aa3.67□□□□□ -1.82
RSM28YDR494W ADE3P07245 946 aaKnown RBP3.66□□□□□ -1.82
RSM28YDR494W PDE1P22434 369 aa3.66□□□□□ -1.82
RSM28YDR494W SWI4P25302 1093 aaKnown RBP3.66□□□□□ -1.82
RSM28YDR494W YCR043CP25361 127 aa3.66□□□□□ -1.82
RSM28YDR494W SWC3P31376 625 aa3.66□□□□□ -1.82
RSM28YDR494W SIP1P32578 815 aa3.66□□□□□ -1.82
RSM28YDR494W SCO2P38072 301 aa3.66□□□□□ -1.82
RSM28YDR494W SPC72P39723 622 aa3.66□□□□□ -1.82
RSM28YDR494W TPM2P40414 161 aa3.66□□□□□ -1.82
RSM28YDR494W FAF1P40546 346 aaPredicted RBP3.66□□□□□ -1.82
RSM28YDR494W CPR6P53691 371 aaKnown RBP3.66□□□□□ -1.82
RSM28YDR494W GIS2P53849 153 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
RSM28YDR494W UBX4P54730 416 aa3.66□□□□□ -1.82
RSM28YDR494W YAT1P80235 687 aa3.66□□□□□ -1.82
RSM28YDR494W EIS1Q05050 843 aaKnown RBP3.66□□□□□ -1.82
RSM28YDR494W DSE3Q08729 430 aa3.66□□□□□ -1.82
RSM28YDR494W YOR111WQ99210 232 aa3.66□□□□□ -1.82
RSM28YDR494W PGI1P12709 554 aaKnown RBP3.65□□□□□ -1.83
RSM28YDR494W CNA1P23287 553 aa3.65□□□□□ -1.83
RSM28YDR494W RPF2P36160 344 aaKnown RBP3.65□□□□□ -1.83
RSM28YDR494W TES1P41903 349 aaKnown RBP3.65□□□□□ -1.83
RSM28YDR494W YJL107CP42947 387 aa3.65□□□□□ -1.83
RSM28YDR494W RRI1Q12468 440 aa3.65□□□□□ -1.83
RSM28YDR494W ARP2P32381 391 aaKnown RBP3.64□□□□□ -1.83
RSM28YDR494W GCD7P32502 381 aaPredicted RBP3.64□□□□□ -1.83
RSM28YDR494W ARC40P38328 384 aaKnown RBP3.64□□□□□ -1.83
RSM28YDR494W VBA2P38358 474 aaKnown RBP3.64□□□□□ -1.83
RSM28YDR494W ACA1P39970 489 aa3.64□□□□□ -1.83
RSM28YDR494W UBP7P40453 1071 aa3.64□□□□□ -1.83
RSM28YDR494W SKP2P42843 763 aa3.64□□□□□ -1.83
RSM28YDR494W ORC5P50874 479 aa3.64□□□□□ -1.83
RSM28YDR494W YBR255C-AQ3E776 120 aa3.64□□□□□ -1.83
RSM28YDR494W PET122P10355 254 aa3.63□□□□□ -1.83
RSM28YDR494W CLB4P24871 460 aa3.63□□□□□ -1.83
RSM28YDR494W GSH1P32477 678 aa3.63□□□□□ -1.83
RSM28YDR494W PUG1P40100 303 aa3.63□□□□□ -1.83
RSM28YDR494W YPT11P48559 417 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms