RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W KTI11Q3E840 82 aa2.54□□□□□ -2
SWR1YDR334W MTR10Q99189 972 aa2.54□□□□□ -2
SWR1YDR334W YPR089WO13585 888 aa2.54□□□□□ -2
SWR1YDR334W OPI1P21957 404 aa2.54□□□□□ -2
SWR1YDR334W BUD5P25300 642 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W RRP43P25359 394 aaPredicted RBP2.54□□□□□ -2
SWR1YDR334W PEP3P27801 918 aa2.54□□□□□ -2
SWR1YDR334W PPH3P32345 308 aa2.54□□□□□ -2
SWR1YDR334W TSA1P34760 196 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W MDJ1P35191 511 aa2.54□□□□□ -2
SWR1YDR334W RPC25P35718 212 aa2.54□□□□□ -2
SWR1YDR334W SRP72P38688 640 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W YER034WP40022 185 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W IML2P47031 731 aa2.54□□□□□ -2
SWR1YDR334W PSP1P50896 841 aaKnown RBP2.54□□□□□ -2
SWR1YDR334W VPS62P53285 467 aa2.54□□□□□ -2
SWR1YDR334W RTS3P53289 263 aa2.54□□□□□ -2
SWR1YDR334W NRD1P53617 575 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SWR1YDR334W HDA1P53973 706 aa2.54□□□□□ -2
SWR1YDR334W APC4Q04601 652 aa2.54□□□□□ -2
SWR1YDR334W YDR286CQ05530 114 aa2.54□□□□□ -2
SWR1YDR334W ATG33Q06485 197 aa2.54□□□□□ -2
SWR1YDR334W LDB17Q12342 491 aa2.54□□□□□ -2
SWR1YDR334W FOB1O13329 566 aa2.53□□□□□ -2
SWR1YDR334W RNR2P09938 399 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W AAD3P25612 363 aa2.53□□□□□ -2
SWR1YDR334W SAH1P39954 449 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W YML6P51998 286 aa2.53□□□□□ -2
SWR1YDR334W MET13P53128 600 aa2.53□□□□□ -2
SWR1YDR334W MRPS35P53292 345 aa2.53□□□□□ -2
SWR1YDR334W RSM24Q03976 319 aa2.53□□□□□ -2
SWR1YDR334W RGA2Q06407 1009 aa2.53□□□□□ -2
SWR1YDR334W YOL057WQ08225 711 aa2.53□□□□□ -2
SWR1YDR334W AI5_ALPHAQ9ZZX1 630 aa2.53□□□□□ -2
SWR1YDR334W SOD2P00447 233 aa2.53□□□□□ -2
SWR1YDR334W HXK2P04807 486 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W REC114P32841 428 aa2.53□□□□□ -2
SWR1YDR334W TAT1P38085 619 aa2.53□□□□□ -2
SWR1YDR334W RRP3P38712 501 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W GPP2P40106 250 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W CAB2P40506 365 aa2.53□□□□□ -2
SWR1YDR334W CHS6P40955 746 aa2.53□□□□□ -2
SWR1YDR334W LCB2P40970 561 aa2.53□□□□□ -2
SWR1YDR334W CCT8P47079 568 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W ASE1P50275 885 aa2.53□□□□□ -2
SWR1YDR334W BIO3P50277 480 aa2.53□□□□□ -2
SWR1YDR334W TAF6P53040 516 aa2.53□□□□□ -2
SWR1YDR334W ELP3Q02908 557 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W YPL277CQ08989 487 aa2.53□□□□□ -2
SWR1YDR334W TRM8Q12009 286 aa2.53□□□□□ -2
SWR1YDR334W PUS1Q12211 544 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W SEC39Q12745 709 aa2.53□□□□□ -2
SWR1YDR334W TMA7Q3E764 64 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W GLT1Q12680 2145 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W HIS5P07172 385 aa2.53□□□□□ -2
SWR1YDR334W HPR1P17629 752 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W SFL1P20134 766 aa2.53□□□□□ -2
SWR1YDR334W SLY1P22213 666 aa2.53□□□□□ -2
SWR1YDR334W TCA17P32613 152 aa2.53□□□□□ -2
SWR1YDR334W FRE1P32791 686 aa2.53□□□□□ -2
SWR1YDR334W TGL1P34163 548 aa2.53□□□□□ -2
SWR1YDR334W SHE3P38272 425 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W FMP52P40008 231 aa2.53□□□□□ -2
SWR1YDR334W UTP25P40498 721 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W MNT3P40549 630 aa2.53□□□□□ -2
SWR1YDR334W PSP2P50109 593 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W ZIP2P53061 704 aa2.53□□□□□ -2
SWR1YDR334W NCS6P53088 359 aa2.53□□□□□ -2
SWR1YDR334W YGR012WP53206 393 aa2.53□□□□□ -2
SWR1YDR334W OGG1P53397 376 aaPredicted RBP2.53□□□□□ -2
SWR1YDR334W RET3P53600 189 aa2.53□□□□□ -2
SWR1YDR334W CNM67P53865 581 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W DBP10Q12389 995 aaKnown RBP2.53□□□□□ -2
SWR1YDR334W EAF3Q12432 401 aa2.53□□□□□ -2
SWR1YDR334W SNF8Q12483 233 aa2.53□□□□□ -2
SWR1YDR334W SKS1Q12505 502 aa2.53□□□□□ -2
SWR1YDR334W YDL007C-AQ2V2Q0 85 aa2.53□□□□□ -2
SWR1YDR334W TY1B-AO13527 1196 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W RPN13O13563 156 aa2.52□□□□□ -2.01
SWR1YDR334W TEF1P02994 458 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W CBP3P21560 335 aa2.52□□□□□ -2.01
SWR1YDR334W SPT10P35208 640 aa2.52□□□□□ -2.01
SWR1YDR334W FES1P38260 290 aa2.52□□□□□ -2.01
SWR1YDR334W LRP1P38801 184 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W UBA4P38820 440 aa2.52□□□□□ -2.01
SWR1YDR334W RPN10P38886 268 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W RBG1P39729 369 aa2.52□□□□□ -2.01
SWR1YDR334W YIL077CP40508 320 aa2.52□□□□□ -2.01
SWR1YDR334W HLJ1P48353 224 aa2.52□□□□□ -2.01
SWR1YDR334W SDH1Q00711 640 aa2.52□□□□□ -2.01
SWR1YDR334W DUS4Q06063 367 aa2.52□□□□□ -2.01
SWR1YDR334W SPE1P08432 466 aa2.52□□□□□ -2.01
SWR1YDR334W LPD1P09624 499 aaKnown RBP2.52□□□□□ -2.01
SWR1YDR334W RPB4P20433 221 aaPredicted RBP2.52□□□□□ -2.01
SWR1YDR334W AEP2P22136 580 aa2.52□□□□□ -2.01
SWR1YDR334W VBA3P25594 458 aa2.52□□□□□ -2.01
SWR1YDR334W PLC1P32383 869 aa2.52□□□□□ -2.01
SWR1YDR334W RRP1P35178 278 aaPredicted RBP2.52□□□□□ -2.01
SWR1YDR334W LHS1P36016 881 aa2.52□□□□□ -2.01
SWR1YDR334W GPB2P39717 880 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms