RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	STB5	P38699	743 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	MSS4	P38994	779 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	GDI1	P39958	451 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	NOP9	P47077	666 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	AAD10	P47182	288 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	YPL108W	Q02872	168 aa	Predicted RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	AIM32	Q04689	311 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	NUS1	Q12063	375 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	HSP42	Q12329	375 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	TRM3	Q07527	1436 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	STH1	P32597	1359 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	TY1B-A	O13527	1196 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	SEC12	P11655	471 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	CHS2	P14180	963 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	TUP1	P16649	713 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	SEC15	P22224	910 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	SWC3	P31376	625 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	SEC21	P32074	935 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	GCD7	P32502	381 aa	Predicted RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	ALY1	P36117	915 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	EHT1	P38295	451 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.53	□□□□□ -1.52	not detected
LCB2	YDR062W	LCB2	P40970	561 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	SAE2	P46946	345 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	ARI1	P53111	347 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	OGG1	P53397	376 aa	Predicted RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	PEX25	Q02969	394 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	ERB1	Q04660	807 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	PDH1	Q12428	516 aa	Known RBP	5.53	□□□□□ -1.52
LCB2	YDR062W	YOL159C-A	Q3E769	90 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	VCX1	Q99385	411 aa		5.53	□□□□□ -1.52
LCB2	YDR062W	DOP1	Q03921	1698 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	RPP2A	P05319	106 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	KAR3	P17119	729 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	RPN2	P32565	945 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	GCS1	P35197	352 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	TDP1	P38319	544 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	RFC1	P38630	861 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	ASE1	P50275	885 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	TAM41	P53230	385 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	ART5	P53244	586 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	CWC22	P53333	577 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	YNR014W	P53719	212 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	CLU1	Q03690	1277 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	VTI1	Q04338	217 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	TPO1	Q07824	586 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	CUE5	Q08412	411 aa	Known RBP	5.52	□□□□□ -1.53
LCB2	YDR062W	TMA16	Q08687	178 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	MLP2	P40457	1679 aa		5.52	□□□□□ -1.53
LCB2	YDR062W	GAL10	P04397	699 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	VMA2	P16140	517 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	ERG6	P25087	383 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	CAP1	P28495	268 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	PRE2	P30656	287 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	STB6	P36085	766 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	KTR3	P38130	404 aa	Predicted RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	RTS1	P38903	757 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	YEL057C	P39983	233 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	GLO1	P50107	326 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	FDC1	Q03034	503 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	NGL2	Q03264	515 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	SSY1	Q03770	852 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	RIX7	Q07844	837 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	LYS21	Q12122	440 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	ERG27	Q12452	347 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	HRP1	Q99383	534 aa	Known RBP	5.51	□□□□□ -1.53
LCB2	YDR062W	YOR093C	Q12275	1648 aa		5.51	□□□□□ -1.53
LCB2	YDR062W	CLB3	P24870	427 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	PUP2	P32379	260 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	PGM1	P33401	570 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	UBP13	P38187	747 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	SMF1	P38925	575 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	LYS9	P38999	446 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	GET2	P40056	285 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	RGI2	P40188	164 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	MET18	P40469	1032 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	SSU1	P41930	458 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	SKP2	P42843	763 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	YJL055W	P47044	245 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	JJJ1	P53863	590 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	GAD1	Q04792	585 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	ECM22	Q05958	814 aa	Predicted RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	SKG3	Q06315	1026 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	DIA2	Q08496	732 aa	Predicted RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	TGL5	Q12043	749 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	CYC1	P00044	109 aa	Predicted RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	STF1	P01098	86 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	APE1	P14904	514 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	TRX1	P22217	103 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	CLB1	P24868	471 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	UBP11	P36026	717 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	APE3	P37302	537 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	REG2	P38232	338 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	PFK26	P40433	827 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	ROK1	P45818	564 aa	Predicted RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	MET12	P46151	657 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	PRP42	Q03776	544 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	RRP9	Q06506	573 aa	Known RBP	5.5	□□□□□ -1.53
LCB2	YDR062W	RIM20	Q12033	661 aa		5.5	□□□□□ -1.53
LCB2	YDR062W	BUD3	P25558	1636 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms