RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W VBA2P38358 474 aaKnown RBP1.89□□□□□ -2.11
CDC36YDL165W CDC1P40986 491 aa1.89□□□□□ -2.11
CDC36YDL165W SDA1P53313 767 aaKnown RBP1.89□□□□□ -2.11
CDC36YDL165W APJ1P53940 528 aa1.89□□□□□ -2.11
CDC36YDL165W PTA1Q01329 785 aaPredicted RBP1.89□□□□□ -2.11
CDC36YDL165W ECI1Q05871 280 aa1.89□□□□□ -2.11
CDC36YDL165W FPR4Q06205 392 aaPredicted RBP1.89□□□□□ -2.11
CDC36YDL165W POS5Q06892 414 aa1.89□□□□□ -2.11
CDC36YDL165W CYB2P00175 591 aa1.88□□□□□ -2.11
CDC36YDL165W CBS2P14905 389 aa1.88□□□□□ -2.11
CDC36YDL165W LDB16P25587 256 aa1.88□□□□□ -2.11
CDC36YDL165W CWH43P25618 953 aa1.88□□□□□ -2.11
CDC36YDL165W PTC6P25646 442 aa1.88□□□□□ -2.11
CDC36YDL165W OCT1P35999 772 aa1.88□□□□□ -2.11
CDC36YDL165W OCA5P38738 679 aa1.88□□□□□ -2.11
CDC36YDL165W ARO9P38840 513 aaPredicted RBP1.88□□□□□ -2.11
CDC36YDL165W MDR1P53258 950 aa1.88□□□□□ -2.11
CDC36YDL165W THI3Q07471 609 aa1.88□□□□□ -2.11
CDC36YDL165W YPL191CQ08930 360 aa1.88□□□□□ -2.11
CDC36YDL165W PDA1P16387 420 aaKnown RBP1.87□□□□□ -2.11
CDC36YDL165W PRO3P32263 286 aaKnown RBP1.87□□□□□ -2.11
CDC36YDL165W HES1P35843 434 aa1.87□□□□□ -2.11
CDC36YDL165W LNP1P38878 278 aa1.87□□□□□ -2.11
CDC36YDL165W ATG27P46989 271 aa1.87□□□□□ -2.11
CDC36YDL165W YPR003CP53394 754 aa1.87□□□□□ -2.11
CDC36YDL165W PIG1Q06216 648 aa1.87□□□□□ -2.11
CDC36YDL165W NGL1Q08213 363 aaKnown RBP1.87□□□□□ -2.11
CDC36YDL165W RAD24P32641 659 aa1.86□□□□□ -2.11
CDC36YDL165W STB5P38699 743 aa1.86□□□□□ -2.11
CDC36YDL165W MCH4Q08268 501 aa1.86□□□□□ -2.11
CDC36YDL165W LEA1Q08963 238 aaPredicted RBP1.86□□□□□ -2.11
CDC36YDL165W DAP1Q12091 152 aa1.86□□□□□ -2.11
CDC36YDL165W BAR1P12630 587 aa1.85□□□□□ -2.11
CDC36YDL165W ARG1P22768 420 aa1.85□□□□□ -2.11
CDC36YDL165W GZF3P42944 551 aaKnown RBP1.85□□□□□ -2.11
CDC36YDL165W UBP8P50102 471 aa1.85□□□□□ -2.11
CDC36YDL165W VPS5Q92331 675 aa1.85□□□□□ -2.11
CDC36YDL165W BUD14P27637 709 aa1.84□□□□□ -2.11
CDC36YDL165W SPG5P42933 373 aa1.84□□□□□ -2.11
CDC36YDL165W IML2P47031 731 aa1.84□□□□□ -2.11
CDC36YDL165W FRE3Q08905 711 aa1.84□□□□□ -2.11
CDC36YDL165W PPT2Q12036 173 aa1.84□□□□□ -2.11
CDC36YDL165W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
CDC36YDL165W ATP12P22135 325 aa1.83□□□□□ -2.12
CDC36YDL165W MGR1P25573 417 aa1.83□□□□□ -2.12
CDC36YDL165W YCR061WP25639 631 aa1.83□□□□□ -2.12
CDC36YDL165W DID4P36108 232 aa1.83□□□□□ -2.12
CDC36YDL165W ERC1P38767 581 aa1.83□□□□□ -2.12
CDC36YDL165W YJR061WP40355 935 aa1.83□□□□□ -2.12
CDC36YDL165W IDS2P46958 469 aa1.83□□□□□ -2.12
CDC36YDL165W MNN11P46985 422 aaKnown RBP1.83□□□□□ -2.12
CDC36YDL165W BOR1P53838 576 aa1.83□□□□□ -2.12
CDC36YDL165W SMA1Q02651 245 aa1.83□□□□□ -2.12
CDC36YDL165W SWF1Q04629 336 aa1.83□□□□□ -2.12
CDC36YDL165W CSR2Q12734 1121 aa1.83□□□□□ -2.12
CDC36YDL165W YTA7P40340 1379 aa1.83□□□□□ -2.12
CDC36YDL165W CBP1P07252 654 aa1.82□□□□□ -2.12
CDC36YDL165W MSH1P25846 959 aa1.82□□□□□ -2.12
CDC36YDL165W RPN2P32565 945 aaKnown RBP1.82□□□□□ -2.12
CDC36YDL165W RPF2P36160 344 aaKnown RBP1.82□□□□□ -2.12
CDC36YDL165W RIM2P38127 377 aa1.82□□□□□ -2.12
CDC36YDL165W IRC5P43610 853 aa1.82□□□□□ -2.12
CDC36YDL165W MNT2P53059 558 aa1.82□□□□□ -2.12
CDC36YDL165W YNL181WP53878 407 aa1.82□□□□□ -2.12
CDC36YDL165W MTQ2Q03920 221 aaPredicted RBP1.82□□□□□ -2.12
CDC36YDL165W URA3P03962 267 aa1.81□□□□□ -2.12
CDC36YDL165W RPL8AP17076 256 aaKnown RBP1.81□□□□□ -2.12
CDC36YDL165W PPG1P32838 368 aa1.81□□□□□ -2.12
CDC36YDL165W TRS65P32893 560 aa1.81□□□□□ -2.12
CDC36YDL165W CAB3P36076 571 aa1.81□□□□□ -2.12
CDC36YDL165W TYS1P36421 394 aaKnown RBP1.81□□□□□ -2.12
CDC36YDL165W SRP68P38687 599 aaKnown RBP1.81□□□□□ -2.12
CDC36YDL165W LEU5P38702 357 aa1.81□□□□□ -2.12
CDC36YDL165W RNR4P49723 345 aaKnown RBP1.81□□□□□ -2.12
CDC36YDL165W YOR378WQ08902 515 aa1.81□□□□□ -2.12
CDC36YDL165W YTM1Q12024 460 aaPredicted RBP1.81□□□□□ -2.12
CDC36YDL165W FAP7Q12055 197 aaPredicted RBP1.81□□□□□ -2.12
CDC36YDL165W PRP45P28004 379 aaPredicted RBP1.8□□□□□ -2.12
CDC36YDL165W PRE2P30656 287 aaKnown RBP1.8□□□□□ -2.12
CDC36YDL165W YPI1P43587 155 aa1.8□□□□□ -2.12
CDC36YDL165W ALG12P53730 551 aa1.8□□□□□ -2.12
CDC36YDL165W BSC1Q12140 328 aa1.8□□□□□ -2.12
CDC36YDL165W YLL056CQ12177 298 aa1.8□□□□□ -2.12
CDC36YDL165W YCR006CP25350 157 aa1.79□□□□□ -2.12
CDC36YDL165W SER1P33330 395 aaKnown RBP1.79□□□□□ -2.12
CDC36YDL165W NPA3P47122 385 aa1.79□□□□□ -2.12
CDC36YDL165W DIN7Q12086 430 aa1.79□□□□□ -2.12
CDC36YDL165W GPA1P08539 472 aa1.78□□□□□ -2.12
CDC36YDL165W SIP1P32578 815 aa1.78□□□□□ -2.12
CDC36YDL165W EBP2P36049 427 aaKnown RBP1.78□□□□□ -2.12
CDC36YDL165W PEA2P40091 420 aa1.78□□□□□ -2.12
CDC36YDL165W GSM1P42950 618 aa1.78□□□□□ -2.12
CDC36YDL165W CRF1Q04930 467 aa1.78□□□□□ -2.12
CDC36YDL165W HOS1Q12214 470 aa1.78□□□□□ -2.12
CDC36YDL165W MTC6P38849 526 aa1.77□□□□□ -2.13
CDC36YDL165W RTS1P38903 757 aa1.77□□□□□ -2.13
CDC36YDL165W YRB30P53107 440 aaPredicted RBP1.77□□□□□ -2.13
CDC36YDL165W UTP21Q06078 939 aaPredicted RBP1.77□□□□□ -2.13
CDC36YDL165W THI73Q07904 523 aa1.77□□□□□ -2.13
CDC36YDL165W NOP14Q99207 810 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms