RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C ASP3-1P0CZ17 362 aa5.36□□□□□ -1.55
SCM3YDL139C CBF1P17106 351 aa5.36□□□□□ -1.55
SCM3YDL139C SAT4P25333 603 aaKnown RBP5.36□□□□□ -1.55
SCM3YDL139C MSH1P25846 959 aa5.36□□□□□ -1.55
SCM3YDL139C SPC110P32380 944 aa5.36□□□□□ -1.55
SCM3YDL139C LTV1P34078 463 aa5.36□□□□□ -1.55
SCM3YDL139C ATG19P35193 415 aa5.36□□□□□ -1.55
SCM3YDL139C SIF2P38262 535 aa5.36□□□□□ -1.55
SCM3YDL139C CRP1P38845 465 aaKnown RBP5.36□□□□□ -1.55
SCM3YDL139C CCT4P39078 528 aaKnown RBP5.36□□□□□ -1.55
SCM3YDL139C GIP4P39732 760 aa5.36□□□□□ -1.55
SCM3YDL139C VID30P53076 958 aa5.36□□□□□ -1.55
SCM3YDL139C DAM1P53267 343 aa5.36□□□□□ -1.55
SCM3YDL139C ATP25Q03153 612 aa5.36□□□□□ -1.55
SCM3YDL139C UFO1Q04511 668 aa5.36□□□□□ -1.55
SCM3YDL139C ECI1Q05871 280 aa5.36□□□□□ -1.55
SCM3YDL139C MET7Q08645 548 aa5.36□□□□□ -1.55
SCM3YDL139C RPB2P08518 1224 aaKnown RBP5.35□□□□□ -1.55
SCM3YDL139C MPH2P0CD99 609 aa5.35□□□□□ -1.55
SCM3YDL139C KIN2P13186 1147 aaKnown RBP5.35□□□□□ -1.55
SCM3YDL139C GLN3P18494 730 aa5.35□□□□□ -1.55
SCM3YDL139C RPC82P32349 654 aa5.35□□□□□ -1.55
SCM3YDL139C SWI3P32591 825 aa5.35□□□□□ -1.55
SCM3YDL139C MTC2P34246 357 aa5.35□□□□□ -1.55
SCM3YDL139C YBP1P38315 674 aa5.35□□□□□ -1.55
SCM3YDL139C YER189WP40104 122 aa5.35□□□□□ -1.55
SCM3YDL139C NIT3P49954 291 aa5.35□□□□□ -1.55
SCM3YDL139C YGR021WP53212 290 aa5.35□□□□□ -1.55
SCM3YDL139C DAK1P54838 584 aaKnown RBP5.35□□□□□ -1.55
SCM3YDL139C MUK1Q02866 612 aa5.35□□□□□ -1.55
SCM3YDL139C INA17Q02888 182 aa5.35□□□□□ -1.55
SCM3YDL139C MSC2Q03455 724 aa5.35□□□□□ -1.55
SCM3YDL139C RSM24Q03976 319 aa5.35□□□□□ -1.55
SCM3YDL139C SIZ1Q04195 904 aa5.35□□□□□ -1.55
SCM3YDL139C SUT2Q12286 268 aa5.35□□□□□ -1.55
SCM3YDL139C TY1B-AO13527 1196 aaKnown RBP5.34□□□□□ -1.55
SCM3YDL139C RAD1P06777 1100 aa5.34□□□□□ -1.55
SCM3YDL139C CDC33P07260 213 aaKnown RBP5.34□□□□□ -1.55
SCM3YDL139C CHS1P08004 1131 aa5.34□□□□□ -1.55
SCM3YDL139C CMP2P14747 604 aa5.34□□□□□ -1.55
SCM3YDL139C RGT1P32862 1170 aa5.34□□□□□ -1.55
SCM3YDL139C MRP4P32902 394 aa5.34□□□□□ -1.55
SCM3YDL139C SRP101P32916 621 aa5.34□□□□□ -1.55
SCM3YDL139C HIS2P38635 335 aa5.34□□□□□ -1.55
SCM3YDL139C LAM1P38851 1228 aa5.34□□□□□ -1.55
SCM3YDL139C HMF1P40037 129 aaKnown RBP5.34□□□□□ -1.55
SCM3YDL139C YER186CP40101 306 aa5.34□□□□□ -1.55
SCM3YDL139C RPT2P40327 437 aaKnown RBP5.34□□□□□ -1.55
SCM3YDL139C SPT20P50875 604 aa5.34□□□□□ -1.55
SCM3YDL139C VPS60Q03390 229 aa5.34□□□□□ -1.55
SCM3YDL139C USA1Q03714 838 aa5.34□□□□□ -1.55
SCM3YDL139C VTI1Q04338 217 aa5.34□□□□□ -1.55
SCM3YDL139C RSC3Q06639 885 aa5.34□□□□□ -1.55
SCM3YDL139C NOP6Q07623 225 aaKnown RBP5.34□□□□□ -1.55
SCM3YDL139C SMC5Q08204 1093 aa5.34□□□□□ -1.55
SCM3YDL139C PLP2Q12017 286 aa5.34□□□□□ -1.55
SCM3YDL139C EMP46Q12396 444 aa5.34□□□□□ -1.55
SCM3YDL139C YLR462WO13556 202 aa5.33□□□□□ -1.56
SCM3YDL139C GAL10P04397 699 aa5.33□□□□□ -1.56
SCM3YDL139C YMR085WP0CF18 432 aa5.33□□□□□ -1.56
SCM3YDL139C ADE2P21264 571 aaKnown RBP5.33□□□□□ -1.56
SCM3YDL139C RFA1P22336 621 aaKnown RBP5.33□□□□□ -1.56
SCM3YDL139C TPS2P31688 896 aaKnown RBP5.33□□□□□ -1.56
SCM3YDL139C YKR018CP36114 725 aa5.33□□□□□ -1.56
SCM3YDL139C LAS1P36146 502 aaPredicted RBP5.33□□□□□ -1.56
SCM3YDL139C YHL049CP38722 271 aa5.33□□□□□ -1.56
SCM3YDL139C END3P39013 349 aa5.33□□□□□ -1.56
SCM3YDL139C CIN4P39110 191 aa5.33□□□□□ -1.56
SCM3YDL139C MEF2P39677 819 aa5.33□□□□□ -1.56
SCM3YDL139C AVT2P39981 480 aa5.33□□□□□ -1.56
SCM3YDL139C TMN3P40071 706 aa5.33□□□□□ -1.56
SCM3YDL139C YFL064CP43540 174 aa5.33□□□□□ -1.56
SCM3YDL139C YJR079WP47126 109 aa5.33□□□□□ -1.56
SCM3YDL139C MAL13P53338 473 aa5.33□□□□□ -1.56
SCM3YDL139C TEP1P53916 434 aa5.33□□□□□ -1.56
SCM3YDL139C PLB2Q03674 706 aa5.33□□□□□ -1.56
SCM3YDL139C YDR514CQ04408 483 aa5.33□□□□□ -1.56
SCM3YDL139C ECM7Q06200 448 aa5.33□□□□□ -1.56
SCM3YDL139C CDA1Q06702 301 aa5.33□□□□□ -1.56
SCM3YDL139C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SCM3YDL139C YPR027CQ12079 277 aa5.33□□□□□ -1.56
SCM3YDL139C GIS3Q12418 502 aa5.33□□□□□ -1.56
SCM3YDL139C YBL111CQ3E7Y5 667 aa5.33□□□□□ -1.56
SCM3YDL139C HSF1P10961 833 aa5.32□□□□□ -1.56
SCM3YDL139C YCL002CP25565 263 aa5.32□□□□□ -1.56
SCM3YDL139C DPH2P32461 534 aa5.32□□□□□ -1.56
SCM3YDL139C SRB4P32569 687 aa5.32□□□□□ -1.56
SCM3YDL139C DRE2P36152 348 aa5.32□□□□□ -1.56
SCM3YDL139C YBR056WP38081 501 aa5.32□□□□□ -1.56
SCM3YDL139C MSG5P38590 489 aa5.32□□□□□ -1.56
SCM3YDL139C SMC2P38989 1170 aaKnown RBP5.32□□□□□ -1.56
SCM3YDL139C YEN1P40028 759 aa5.32□□□□□ -1.56
SCM3YDL139C KHA1P40309 873 aa5.32□□□□□ -1.56
SCM3YDL139C HLJ1P48353 224 aa5.32□□□□□ -1.56
SCM3YDL139C DRN1P53255 507 aaKnown RBP5.32□□□□□ -1.56
SCM3YDL139C YGR111WP53265 400 aa5.32□□□□□ -1.56
SCM3YDL139C NOG2P53742 486 aaKnown RBP5.32□□□□□ -1.56
SCM3YDL139C DUS1P53759 423 aaKnown RBP5.32□□□□□ -1.56
SCM3YDL139C YNL144CP53907 740 aa5.32□□□□□ -1.56
SCM3YDL139C GPD1Q00055 391 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms