RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B DIN7Q12086 430 aa2.14□□□□□ -2.07
HTL1YCR020W-B YLR112WQ12130 139 aa2.14□□□□□ -2.07
HTL1YCR020W-B YMR230W-AQ3E7B5 62 aa2.14□□□□□ -2.07
HTL1YCR020W-B COX11P19516 300 aaKnown RBP2.13□□□□□ -2.07
HTL1YCR020W-B YCR061WP25639 631 aa2.13□□□□□ -2.07
HTL1YCR020W-B RPF2P36160 344 aaKnown RBP2.13□□□□□ -2.07
HTL1YCR020W-B DED81P38707 554 aaKnown RBP2.13□□□□□ -2.07
HTL1YCR020W-B ARB1P40024 610 aaKnown RBP2.13□□□□□ -2.07
HTL1YCR020W-B UBP7P40453 1071 aa2.13□□□□□ -2.07
HTL1YCR020W-B DUG1P43616 481 aaKnown RBP2.13□□□□□ -2.07
HTL1YCR020W-B SLD3P53135 668 aa2.13□□□□□ -2.07
HTL1YCR020W-B YGL036WP53185 909 aaPredicted RBP2.13□□□□□ -2.07
HTL1YCR020W-B YPR003CP53394 754 aa2.13□□□□□ -2.07
HTL1YCR020W-B IZH1Q03419 316 aa2.13□□□□□ -2.07
HTL1YCR020W-B FMP42Q04991 504 aa2.13□□□□□ -2.07
HTL1YCR020W-B THI3Q07471 609 aa2.13□□□□□ -2.07
HTL1YCR020W-B YPL191CQ08930 360 aa2.13□□□□□ -2.07
HTL1YCR020W-B KGD2P19262 463 aaPredicted RBP2.12□□□□□ -2.07
HTL1YCR020W-B RPS7AP26786 190 aaKnown RBP2.12□□□□□ -2.07
HTL1YCR020W-B YOX1P34161 385 aa2.12□□□□□ -2.07
HTL1YCR020W-B NMD2P38798 1089 aaKnown RBP2.12□□□□□ -2.07
HTL1YCR020W-B YND1P40009 630 aa2.12□□□□□ -2.07
HTL1YCR020W-B SKP2P42843 763 aa2.12□□□□□ -2.07
HTL1YCR020W-B QRI7P43122 407 aa2.12□□□□□ -2.07
HTL1YCR020W-B HOL1P53389 586 aa2.12□□□□□ -2.07
HTL1YCR020W-B RTT103Q05543 409 aa2.12□□□□□ -2.07
HTL1YCR020W-B LEA1Q08963 238 aaPredicted RBP2.12□□□□□ -2.07
HTL1YCR020W-B DBP10Q12389 995 aaKnown RBP2.12□□□□□ -2.07
HTL1YCR020W-B YCR006CP25350 157 aa2.11□□□□□ -2.07
HTL1YCR020W-B RKM3P38222 552 aa2.11□□□□□ -2.07
HTL1YCR020W-B SDS24P38314 527 aa2.11□□□□□ -2.07
HTL1YCR020W-B NIT2P47016 307 aa2.11□□□□□ -2.07
HTL1YCR020W-B YNL034WP53963 612 aa2.11□□□□□ -2.07
HTL1YCR020W-B TRS31Q03337 283 aa2.11□□□□□ -2.07
HTL1YCR020W-B GPN2Q08726 347 aaPredicted RBP2.11□□□□□ -2.07
HTL1YCR020W-B SWC3P31376 625 aa2.1□□□□□ -2.07
HTL1YCR020W-B MNN2P38069 597 aa2.1□□□□□ -2.07
HTL1YCR020W-B YBR139WP38109 508 aa2.1□□□□□ -2.07
HTL1YCR020W-B ERC1P38767 581 aa2.1□□□□□ -2.07
HTL1YCR020W-B BZZ1P38822 633 aa2.1□□□□□ -2.07
HTL1YCR020W-B DHH1P39517 506 aaKnown RBP2.1□□□□□ -2.07
HTL1YCR020W-B SSP120P39931 234 aaKnown RBP2.1□□□□□ -2.07
HTL1YCR020W-B NPA3P47122 385 aa2.1□□□□□ -2.07
HTL1YCR020W-B YLR281CQ05863 155 aa2.1□□□□□ -2.07
HTL1YCR020W-B COX1P00401 534 aa2.09□□□□□ -2.07
HTL1YCR020W-B OCT1P35999 772 aa2.09□□□□□ -2.07
HTL1YCR020W-B VPS41P38959 992 aa2.09□□□□□ -2.07
HTL1YCR020W-B PCL6P40038 420 aa2.09□□□□□ -2.07
HTL1YCR020W-B ASG1P40467 964 aa2.09□□□□□ -2.07
HTL1YCR020W-B POL31P46957 487 aa2.09□□□□□ -2.07
HTL1YCR020W-B UBP8P50102 471 aa2.09□□□□□ -2.07
HTL1YCR020W-B POS5Q06892 414 aa2.09□□□□□ -2.07
HTL1YCR020W-B MCH4Q08268 501 aa2.09□□□□□ -2.07
HTL1YCR020W-B TRE2Q08693 809 aa2.09□□□□□ -2.07
HTL1YCR020W-B FRE3Q08905 711 aa2.09□□□□□ -2.07
HTL1YCR020W-B PRP45P28004 379 aaPredicted RBP2.08□□□□□ -2.08
HTL1YCR020W-B LAC1P28496 418 aa2.08□□□□□ -2.08
HTL1YCR020W-B HEM12P32347 362 aaPredicted RBP2.08□□□□□ -2.08
HTL1YCR020W-B FUN12P39730 1002 aaKnown RBP2.08□□□□□ -2.08
HTL1YCR020W-B SCS2P40075 244 aaKnown RBP2.08□□□□□ -2.08
HTL1YCR020W-B CDC1P40986 491 aa2.08□□□□□ -2.08
HTL1YCR020W-B UBX6P47049 396 aa2.08□□□□□ -2.08
HTL1YCR020W-B PSP1P50896 841 aaKnown RBP2.08□□□□□ -2.08
HTL1YCR020W-B ESBP6P53918 673 aa2.08□□□□□ -2.08
HTL1YCR020W-B PEX15Q08215 383 aa2.08□□□□□ -2.08
HTL1YCR020W-B PSF3Q12146 194 aa2.08□□□□□ -2.08
HTL1YCR020W-B TAH18Q12181 623 aa2.08□□□□□ -2.08
HTL1YCR020W-B CBP1P07252 654 aa2.07□□□□□ -2.08
HTL1YCR020W-B VAS1P07806 1104 aaKnown RBP2.07□□□□□ -2.08
HTL1YCR020W-B KAR1P11927 433 aa2.07□□□□□ -2.08
HTL1YCR020W-B PDE1P22434 369 aa2.07□□□□□ -2.08
HTL1YCR020W-B TPA1P40032 644 aaKnown RBP2.07□□□□□ -2.08
HTL1YCR020W-B EMP65P40085 556 aa2.07□□□□□ -2.08
HTL1YCR020W-B CRZ1P53968 678 aa2.07□□□□□ -2.08
HTL1YCR020W-B VPS64Q03944 604 aa2.07□□□□□ -2.08
HTL1YCR020W-B SND1Q04007 877 aa2.07□□□□□ -2.08
HTL1YCR020W-B YDR109CQ04585 715 aa2.07□□□□□ -2.08
HTL1YCR020W-B TRI1Q05024 226 aa2.07□□□□□ -2.08
HTL1YCR020W-B PIG1Q06216 648 aa2.07□□□□□ -2.08
HTL1YCR020W-B YER145C-AA0A023PYF4 145 aa2.06□□□□□ -2.08
HTL1YCR020W-B SUI3P09064 285 aaKnown RBP2.06□□□□□ -2.08
HTL1YCR020W-B TGL1P34163 548 aa2.06□□□□□ -2.08
HTL1YCR020W-B ESF2P53743 316 aaKnown RBP2.06□□□□□ -2.08
HTL1YCR020W-B YMR254CQ04838 102 aa2.06□□□□□ -2.08
HTL1YCR020W-B ARP9Q05123 467 aa2.06□□□□□ -2.08
HTL1YCR020W-B ECI1Q05871 280 aa2.06□□□□□ -2.08
HTL1YCR020W-B APL5Q08951 932 aaKnown RBP2.06□□□□□ -2.08
HTL1YCR020W-B NUR1Q12066 484 aa2.06□□□□□ -2.08
HTL1YCR020W-B HNM1P19807 563 aa2.05□□□□□ -2.08
HTL1YCR020W-B PHO3P24031 467 aa2.05□□□□□ -2.08
HTL1YCR020W-B TAF5P38129 798 aa2.05□□□□□ -2.08
HTL1YCR020W-B FPR3P38911 411 aaKnown RBP2.05□□□□□ -2.08
HTL1YCR020W-B YNL234WP53857 426 aa2.05□□□□□ -2.08
HTL1YCR020W-B CAC2Q04199 468 aa2.05□□□□□ -2.08
HTL1YCR020W-B SWF1Q04629 336 aa2.05□□□□□ -2.08
HTL1YCR020W-B YLR352WQ06479 807 aa2.05□□□□□ -2.08
HTL1YCR020W-B AIM6Q07716 390 aa2.05□□□□□ -2.08
HTL1YCR020W-B YBR255C-AQ3E776 120 aa2.05□□□□□ -2.08
HTL1YCR020W-B YML002WP0CF17 737 aa2.04□□□□□ -2.08
HTL1YCR020W-B PRP16P15938 1071 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms