RNA–Protein interactions for RNA: YAL042W

ERV46, Transcript of Protein localized to COPII-coated vesicles, yeast

Gene ERV46, Length 1,248 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERV46	YAL042W	LDB18	Q07887	179 aa		11.93	□□□□□ -0.5
ERV46	YAL042W	TRE2	Q08693	809 aa		11.93	□□□□□ -0.5
ERV46	YAL042W	PMA2	P19657	947 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	MNE1	P24720	663 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	GCD6	P32501	712 aa	Known RBP	11.92	□□□□□ -0.5
ERV46	YAL042W	ALY1	P36117	915 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	TFA2	P36145	328 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	IST3	P40565	148 aa	Predicted RBP	11.92	□□□□□ -0.5
ERV46	YAL042W	GLG2	P47011	380 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	CSN12	P47130	423 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	DAN4	P47179	1161 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	CDC14	Q00684	551 aa		11.92	□□□□□ -0.5
ERV46	YAL042W	SLU7	Q02775	382 aa	Known RBP	11.92	□□□□□ -0.5
ERV46	YAL042W	YMR178W	Q03219	274 aa	Known RBP	11.92	□□□□□ -0.5
ERV46	YAL042W	DCC1	P25559	380 aa		11.91	□□□□□ -0.5
ERV46	YAL042W	ECM2	P38241	364 aa	Known RBP	11.91	□□□□□ -0.5
ERV46	YAL042W	GND2	P53319	492 aa		11.91	□□□□□ -0.5
ERV46	YAL042W	IPI3	P53877	555 aa		11.91	□□□□□ -0.5
ERV46	YAL042W	TEP1	P53916	434 aa		11.91	□□□□□ -0.5
ERV46	YAL042W	SIW14	P53965	281 aa		11.91	□□□□□ -0.5
ERV46	YAL042W	RPL34A	P87262	121 aa	Predicted RBP	11.91	□□□□□ -0.5
ERV46	YAL042W	CDC24	P11433	854 aa	Predicted RBP	11.9	□□□□□ -0.5
ERV46	YAL042W	TIF34	P40217	347 aa	Known RBP	11.9	□□□□□ -0.5
ERV46	YAL042W	SIP4	P46954	829 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	ATG36	P46983	293 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	STR3	P53101	465 aa	Known RBP	11.9	□□□□□ -0.5
ERV46	YAL042W	YGL140C	P53120	1219 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	SPC105	P53148	917 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	YMR160W	Q03823	816 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	LDB17	Q12342	491 aa		11.9	□□□□□ -0.5
ERV46	YAL042W	TOR1	P35169	2470 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	QCR6	P00127	147 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	MPH2	P0CD99	609 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	CHL1	P22516	861 aa	Predicted RBP	11.89	□□□□□ -0.51
ERV46	YAL042W	PMT1	P33775	817 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	SCD5	P34758	872 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	VHC1	P38329	1120 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	TAE1	P38340	232 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	MMS21	P38632	267 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	IML2	P47031	731 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	MNN10	P50108	393 aa	Known RBP	11.89	□□□□□ -0.51
ERV46	YAL042W	RSC4	Q02206	625 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	RLI1	Q03195	608 aa	Known RBP	11.89	□□□□□ -0.51
ERV46	YAL042W	PPN1	Q04119	674 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	Q0182	Q9ZZW1	134 aa		11.89	□□□□□ -0.51
ERV46	YAL042W	CLN1	P20437	546 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	NDI1	P32340	513 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	TFB1	P32776	642 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	KES1	P35844	434 aa	Known RBP	11.88	□□□□□ -0.51
ERV46	YAL042W	POP4	P38336	279 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	REI1	P38344	393 aa	Predicted RBP	11.88	□□□□□ -0.51
ERV46	YAL042W	SLX8	P40072	274 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	MAD1	P40957	749 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	BUD13	P46947	266 aa	Predicted RBP	11.88	□□□□□ -0.51
ERV46	YAL042W	SNO2	P53823	222 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	UTP6	Q02354	440 aa	Known RBP	11.88	□□□□□ -0.51
ERV46	YAL042W	GNT1	Q12096	491 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	NAG1	Q8TGN9	163 aa		11.88	□□□□□ -0.51
ERV46	YAL042W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.87	□□□□□ -0.51	not detected
ERV46	YAL042W	BRF1	P29056	596 aa		11.87	□□□□□ -0.51
ERV46	YAL042W	WSC4	P38739	605 aa		11.87	□□□□□ -0.51
ERV46	YAL042W	SCC4	P40090	624 aa		11.87	□□□□□ -0.51
ERV46	YAL042W	SAM4	Q08985	325 aa	Known RBP	11.87	□□□□□ -0.51
ERV46	YAL042W	AVL9	Q12500	764 aa		11.87	□□□□□ -0.51
ERV46	YAL042W	SPT15	P13393	240 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	MGT1	P26188	188 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	PMI40	P29952	429 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	AEP1	P32493	518 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	SLX5	P32828	619 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	IRS4	P36115	615 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	MSR1	P38714	643 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	SMF2	P38778	549 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	LRP1	P38801	184 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	TES1	P41903	349 aa	Known RBP	11.86	□□□□□ -0.51
ERV46	YAL042W	NBP35	P52920	328 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	SAP4	P53036	818 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	YPR003C	P53394	754 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	ATG10	Q07879	167 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	ACM1	Q08981	209 aa		11.86	□□□□□ -0.51
ERV46	YAL042W	PFS1	P38872	237 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	NMD5	P46970	1048 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	PCL10	P53124	433 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	MET14	Q02196	202 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	GSF2	Q04697	403 aa	Known RBP	11.85	□□□□□ -0.51
ERV46	YAL042W	ESC2	Q06340	456 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	CDC73	Q06697	393 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	HOS1	Q12214	470 aa		11.85	□□□□□ -0.51
ERV46	YAL042W	RPL40A	P0CH08	128 aa	Known RBP	11.84	□□□□□ -0.51
ERV46	YAL042W	RPL40B	P0CH09	128 aa	Known RBP	11.84	□□□□□ -0.51
ERV46	YAL042W	ERR1	P0CX10	437 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	ERR2	P0CX11	437 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	HEM12	P32347	362 aa	Predicted RBP	11.84	□□□□□ -0.51
ERV46	YAL042W	RGI2	P40188	164 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	YJL070C	P40361	888 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	ERR3	P42222	437 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	NUP100	Q02629	959 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	VTI1	Q04338	217 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	YDL129W	Q07555	291 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	PIN2	Q12057	282 aa		11.84	□□□□□ -0.51
ERV46	YAL042W	COX3	P00420	269 aa		11.83	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms