RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 HydinQ80W93 5154 aa13,97□□□□□ -0,17
Pcf11-205ENSMUST00000208255 Reg3aO09037 175 aa13,95□□□□□ -0,18
Pcf11-205ENSMUST00000208255 Hist1h4aP62806 103 aaKnown RBP13,95□□□□□ -0,18
Pcf11-205ENSMUST00000208255 Igkv8-19A0A0G2JFN8 121 aa13,95□□□□□ -0,18
Pcf11-205ENSMUST00000208255 Cystm1Q8K353 104 aa13,93□□□□□ -0,18
Pcf11-205ENSMUST00000208255 Dph3Q8K0W9 82 aa13,93□□□□□ -0,18
Pcf11-205ENSMUST00000208255 Lce1mQ9CR91 182 aa13,88□□□□□ -0,19
Pcf11-205ENSMUST00000208255 Mycbp2Q7TPH6 4711 aa13,87□□□□□ -0,19
Pcf11-205ENSMUST00000208255 Gm2310J3QNJ2 377 aa13,85□□□□□ -0,19
Pcf11-205ENSMUST00000208255 PcloQ9QYX7 5068 aa13,83□□□□□ -0,2
Pcf11-205ENSMUST00000208255 Prr15lQ8JZM2 100 aa13,82□□□□□ -0,2
Pcf11-205ENSMUST00000208255 Anapc13Q8R034 74 aa13,82□□□□□ -0,2
Pcf11-205ENSMUST00000208255 Fam229bQ8CF36 80 aa13,81□□□□□ -0,2
Pcf11-205ENSMUST00000208255 Rps29P62274 56 aa13,78□□□□□ -0,2
Pcf11-205ENSMUST00000208255 Gm9736A0A1W2P7N1 277 aa13,76□□□□□ -0,21
Pcf11-205ENSMUST00000208255 Defa21Q8C1P2 93 aa13,74□□□□□ -0,21
Pcf11-205ENSMUST00000208255 Cypt15B1AXS0 87 aa13,7□□□□□ -0,22
Pcf11-205ENSMUST00000208255 Ndufc1Q9CQY9 76 aa13,69□□□□□ -0,22
Pcf11-205ENSMUST00000208255 Igkv3-3A0A140T8Q0 119 aa13,67□□□□□ -0,22
Pcf11-205ENSMUST00000208255 7530416G11RikJ3QJX6 159 aa13,64□□□□□ -0,23
Pcf11-205ENSMUST00000208255 Spink8Q09TK9 105 aa13,59□□□□□ -0,23
Pcf11-205ENSMUST00000208255 A0A286YE49 62 aa13,57□□□□□ -0,24
Pcf11-205ENSMUST00000208255 4930518I15RikQ3V2W7 57 aa13,57□□□□□ -0,24
Pcf11-205ENSMUST00000208255 Lrp2A2ARV4 4660 aa13,57□□□□□ -0,24
Pcf11-205ENSMUST00000208255 Naa38Q9D2U5 125 aa13,55□□□□□ -0,24
Pcf11-205ENSMUST00000208255 Samd13D3YUG0 102 aa13,54□□□□□ -0,24
Pcf11-205ENSMUST00000208255 GhrhP16043 103 aa13,51□□□□□ -0,25
Pcf11-205ENSMUST00000208255 Serp2Q6TAW2 65 aa13,5□□□□□ -0,25
Pcf11-205ENSMUST00000208255 Gm11939A2A592 99 aa13,47□□□□□ -0,25
Pcf11-205ENSMUST00000208255 Herc1E9PZP8 4859 aa13,43□□□□□ -0,26
Pcf11-205ENSMUST00000208255 BikO70337 150 aa13,4□□□□□ -0,26
Pcf11-205ENSMUST00000208255 Gm5965D3Z724 196 aa13,39□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Gm10267M0QWD8 85 aa13,39□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Gm18596A0A1W2P860 280 aa13,38□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Defb13Q8R2I4 64 aa13,38□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Gm26620Q9CY65 116 aa13,36□□□□□ -0,27
Pcf11-205ENSMUST00000208255 1700074P13RikQ9D9G7 251 aa13,35□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Gm5767A0A0J9YTU8 78 aa13,33□□□□□ -0,27
Pcf11-205ENSMUST00000208255 A930033H14RikG5E8X6 103 aa13,33□□□□□ -0,27
Pcf11-205ENSMUST00000208255 Apoc4Q61268 124 aa13,32□□□□□ -0,28
Pcf11-205ENSMUST00000208255 Prr13Q9CQJ5 137 aa13,27□□□□□ -0,28
Pcf11-205ENSMUST00000208255 B230307C23RikQ8BLB2 64 aa13,27□□□□□ -0,29
Pcf11-205ENSMUST00000208255 Krtap3-2Q9D638 99 aa13,16□□□□□ -0,3
Pcf11-205ENSMUST00000208255 Krtap3-3Q9D7P0 99 aa13,16□□□□□ -0,3
Pcf11-205ENSMUST00000208255 Coa6Q8BGD8 79 aa13,13□□□□□ -0,31
Pcf11-205ENSMUST00000208255 Atox1O08997 68 aaKnown RBP13,13□□□□□ -0,31
Pcf11-205ENSMUST00000208255 Scgb1b2O35176 93 aa13,12□□□□□ -0,31
Pcf11-205ENSMUST00000208255 Spint4Q9D263 159 aa13,12□□□□□ -0,31
Pcf11-205ENSMUST00000208255 Gm9821Q8K076 103 aa13,1□□□□□ -0,31
Pcf11-205ENSMUST00000208255 Chtf8P0CG14 533 aa13,02□□□□□ -0,33
Pcf11-205ENSMUST00000208255 Gm28539A0A087WSL9 92 aa12,99□□□□□ -0,33
Pcf11-205ENSMUST00000208255 Krtap15-1Q9QZU5 150 aa12,99□□□□□ -0,33
Pcf11-205ENSMUST00000208255 Prm1P02319 51 aa12,95□□□□□ -0,34
Pcf11-205ENSMUST00000208255 Ush2AQ2QI47 5193 aa12,9□□□□□ -0,34
Pcf11-205ENSMUST00000208255 Rpl37Q9D823 97 aa12,89□□□□□ -0,35
Pcf11-205ENSMUST00000208255 Defb38Q7TNV7 63 aa12,88□□□□□ -0,35
Pcf11-205ENSMUST00000208255 Gm10160F6Y577 67 aa12,86□□□□□ -0,35
Pcf11-205ENSMUST00000208255 Tmem258P61166 79 aa12,85□□□□□ -0,35
Pcf11-205ENSMUST00000208255 Gm9789Q8BIG3 52 aa12,85□□□□□ -0,35
Pcf11-205ENSMUST00000208255 Gm7735D3YX18 52 aa12,84□□□□□ -0,35
Pcf11-205ENSMUST00000208255 SmcpP15265 143 aa12,83□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Gm4491E0CX42 125 aa12,82□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Coa5Q99M07 74 aa12,8□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Gm10999F6Q4M4 69 aa12,79□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Gm21798J3QNU5 87 aa12,79□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Q8BGJ3 129 aa12,77□□□□□ -0,36
Pcf11-205ENSMUST00000208255 Smlr1J3QMJ4 66 aa12,76□□□□□ -0,37
Pcf11-205ENSMUST00000208255 Sec61bQ9CQS8 96 aaKnown RBP12,76□□□□□ -0,37
Pcf11-205ENSMUST00000208255 Gm19935A0A1B0GSF9 52 aa12,76□□□□□ -0,37
Pcf11-205ENSMUST00000208255 SnurfQ9WU12 71 aa12,73□□□□□ -0,37
Pcf11-205ENSMUST00000208255 Hmcn2A2AJ76 5100 aa12,71□□□□□ -0,38
Pcf11-205ENSMUST00000208255 Gm10643Q3URG9 111 aa12,67□□□□□ -0,38
Pcf11-205ENSMUST00000208255 2310079G19RikQ9D6L6 185 aa12,67□□□□□ -0,38
Pcf11-205ENSMUST00000208255 2310034C09RikQ9D746 214 aa12,66□□□□□ -0,38
Pcf11-205ENSMUST00000208255 Pet100P0DJE0 76 aa12,65□□□□□ -0,38
Pcf11-205ENSMUST00000208255 Rnase13Q5GAM7 153 aa12,64□□□□□ -0,39
Pcf11-205ENSMUST00000208255 2310057N15RikQ9D6T8 200 aa12,64□□□□□ -0,39
Pcf11-205ENSMUST00000208255 Ubr4A2AN08 5180 aa12,57□□□□□ -0,4
Pcf11-205ENSMUST00000208255 4930507D05RikQ8C9C9 103 aa12,54□□□□□ -0,4
Pcf11-205ENSMUST00000208255 Cdc42se1Q8BHL7 80 aa12,51□□□□□ -0,41
Pcf11-205ENSMUST00000208255 Smim20D3Z7Q2 69 aa12,49□□□□□ -0,41
Pcf11-205ENSMUST00000208255 4932415D10RikA0A1W2P6U8 4986 aa12,45□□□□□ -0,42
Pcf11-205ENSMUST00000208255 Gm17416Q30KP4 66 aa12,45□□□□□ -0,42
Pcf11-205ENSMUST00000208255 Serp1Q9Z1W5 66 aa12,45□□□□□ -0,42
Pcf11-205ENSMUST00000208255 9230102O04RikA2ASX7 82 aa12,44□□□□□ -0,42
Pcf11-205ENSMUST00000208255 Rps28P62858 69 aaKnown RBP12,42□□□□□ -0,42
Pcf11-205ENSMUST00000208255 Brk1Q91VR8 75 aa12,37□□□□□ -0,43
Pcf11-205ENSMUST00000208255 Pcp4P63054 62 aa12,35□□□□□ -0,43
Pcf11-205ENSMUST00000208255 Krtap1-3A2A588 173 aa12,31□□□□□ -0,44
Pcf11-205ENSMUST00000208255 Gm10197F6QEY5 67 aa12,31□□□□□ -0,44
Pcf11-205ENSMUST00000208255 Crct1Q6PAI5 102 aa12,26□□□□□ -0,45
Pcf11-205ENSMUST00000208255 Defb1P56386 69 aa12,25□□□□□ -0,45
Pcf11-205ENSMUST00000208255 Gm20661K7N787 53 aa12,25□□□□□ -0,45
Pcf11-205ENSMUST00000208255 Phxr4P15974 95 aa12,18□□□□□ -0,46
Pcf11-205ENSMUST00000208255 Krtap16-3Q8C1I6 86 aa12,17□□□□□ -0,46
Pcf11-205ENSMUST00000208255 Fam229aB2KGE5 128 aa12,14□□□□□ -0,47
Pcf11-205ENSMUST00000208255 SptssbQ925E8 76 aa12,12□□□□□ -0,47
Pcf11-205ENSMUST00000208255 H2al1aQ5M8Q2 105 aa12,11□□□□□ -0,47
Pcf11-205ENSMUST00000208255 H2al1eQ810S6 105 aa12,11□□□□□ -0,47
Pcf11-205ENSMUST00000208255 ZanO88799 5376 aa12,1□□□□□ -0,47
Retrieved 100 of 22,080 RNA–protein pairs in 50,9 ms