RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Gm35339A0A140LHH9 1649 aa52.23■■■■■ 5.95
Pcf11-205ENSMUST00000208255 NischQ80TM9 1593 aa51.94■■■■■ 5.9
Pcf11-205ENSMUST00000208255 Abcc9P70170 1546 aa50.33■■■■■ 5.65
Pcf11-205ENSMUST00000208255 Abcc8B2RUS7 1588 aa49.97■■■■■ 5.59
Pcf11-205ENSMUST00000208255 ScribQ80U72 1612 aa47.64■■■■■ 5.22
Pcf11-205ENSMUST00000208255 NacadQ5SWP3 1504 aa46.34■■■■■ 5.01
Pcf11-205ENSMUST00000208255 Kdm5dQ62240 1548 aa46.3■■■■■ 5
Pcf11-205ENSMUST00000208255 Dcaf1Q80TR8 1506 aa46.29■■■■■ 5
Pcf11-205ENSMUST00000208255 Rhox8Q6VSS7 320 aa45.72■■■■■ 4.91
Pcf11-205ENSMUST00000208255 Sycp2Q9CUU3 1500 aa45.37■■■■■ 4.85
Pcf11-205ENSMUST00000208255 Rb1cc1Q9ESK9 1588 aa45.32■■■■■ 4.85
Pcf11-205ENSMUST00000208255 Ccdc180J3QNE4 1664 aa44.88■■■■■ 4.78
Pcf11-205ENSMUST00000208255 Baz1aO88379 1555 aa44.76■■■■■ 4.76
Pcf11-205ENSMUST00000208255 BicraF8VPZ9 1578 aa44.56■■■■■ 4.72
Pcf11-205ENSMUST00000208255 Crybg2B7ZCC2 1516 aa44.54■■■■■ 4.72
Pcf11-205ENSMUST00000208255 Zcchc6Q5BLK4 1491 aaKnown RBP43.96■■■■■ 4.63
Pcf11-205ENSMUST00000208255 Rtl1Q7M732 1744 aa43.85■■■■■ 4.61
Pcf11-205ENSMUST00000208255 Smarca2Q6DIC0 1577 aa43.52■■■■■ 4.56
Pcf11-205ENSMUST00000208255 Pds5bQ4VA53 1446 aaKnown RBP43.24■■■■■ 4.51
Pcf11-205ENSMUST00000208255 Cecr2E9Q2Z1 1453 aa43.02■■■■■ 4.48
Pcf11-205ENSMUST00000208255 Atad2bE9Q166 1460 aaKnown RBP42.98■■■■■ 4.47
Pcf11-205ENSMUST00000208255 Smarca4Q3TKT4 1613 aaKnown RBP42.93■■■■■ 4.46
Pcf11-205ENSMUST00000208255 Ccdc136Q3TVA9 1136 aa42.64■■■■■ 4.42
Pcf11-205ENSMUST00000208255 Iqgap2Q3UQ44 1575 aa42.57■■■■■ 4.4
Pcf11-205ENSMUST00000208255 Thoc2B1AZI6 1594 aaKnown RBP42.49■■■■■ 4.39
Pcf11-205ENSMUST00000208255 Brd4Q9ESU6 1400 aaKnown RBP42.41■■■■■ 4.38
Pcf11-205ENSMUST00000208255 Ercc6F8VPZ5 1481 aa42.33■■■■■ 4.37
Pcf11-205ENSMUST00000208255 CftrP26361 1476 aa42.24■■■■■ 4.35
Pcf11-205ENSMUST00000208255 Synj1Q8CHC4 1574 aa42.2■■■■■ 4.35
Pcf11-205ENSMUST00000208255 Cttnbp2B9EJA2 1648 aa42.17■■■■■ 4.34
Pcf11-205ENSMUST00000208255 Trim41Q5NCC3 630 aa42.12■■■■■ 4.33
Pcf11-205ENSMUST00000208255 Dnajc5bQ9CQ94 199 aa42.12■■■■■ 4.33
Pcf11-205ENSMUST00000208255 Wdr62Q3U3T8 1523 aa42.08■■■■■ 4.33
Pcf11-205ENSMUST00000208255 Frmpd1A2AKB4 1549 aa42.02■■■■■ 4.32
Pcf11-205ENSMUST00000208255 Cc2d2aQ8CFW7 1633 aa41.87■■■■■ 4.29
Pcf11-205ENSMUST00000208255 Fam135aQ6NS59 1506 aa41.72■■■■■ 4.27
Pcf11-205ENSMUST00000208255 Phldb1Q6PDH0 1371 aaKnown RBP41.66■■■■■ 4.26
Pcf11-205ENSMUST00000208255 Esf1Q3V1V3 845 aaKnown RBP41.62■■■■■ 4.25
Pcf11-205ENSMUST00000208255 Unc13aQ4KUS2 1712 aa41.42■■■■■ 4.22
Pcf11-205ENSMUST00000208255 Baz1bQ9Z277 1479 aa41.35■■■■■ 4.21
Pcf11-205ENSMUST00000208255 Ubl4bQ9CQ84 188 aa41.24■■■■■ 4.19
Pcf11-205ENSMUST00000208255 Golga3P55937 1487 aa41.18■■■■■ 4.18
Pcf11-205ENSMUST00000208255 Top2bQ64511 1612 aa41.01■■■■■ 4.16
Pcf11-205ENSMUST00000208255 Cngb1E1AZ71 1325 aa41■■■■■ 4.15
Pcf11-205ENSMUST00000208255 Rsf1E9PWW9 1441 aaKnown RBP40.98■■■■■ 4.15
Pcf11-205ENSMUST00000208255 Lamc3Q9R0B6 1581 aa40.83■■■■■ 4.13
Pcf11-205ENSMUST00000208255 Kif15Q6P9L6 1387 aa40.82■■■■■ 4.13
Pcf11-205ENSMUST00000208255 Mrc2Q64449 1479 aa40.78■■■■■ 4.12
Pcf11-205ENSMUST00000208255 HrcG5E8J6 738 aa40.72■■■■■ 4.11
Pcf11-205ENSMUST00000208255 Cux2P70298 1426 aa40.61■■■■■ 4.09
Pcf11-205ENSMUST00000208255 TnnQ80Z71 1560 aa40.59■■■■■ 4.09
Pcf11-205ENSMUST00000208255 Fmn1Q05860 1466 aa40.56■■■■■ 4.08
Pcf11-205ENSMUST00000208255 Npm1Q61937 292 aaKnown RBP40.3■■■■■ 4.04
Pcf11-205ENSMUST00000208255 Ccdc88bQ4QRL3 1481 aa40.27■■■■■ 4.04
Pcf11-205ENSMUST00000208255 Ccdc18Q640L5 1455 aa40.27■■■■■ 4.04
Pcf11-205ENSMUST00000208255 Cep164Q5DU05 1446 aa40.2■■■■■ 4.03
Pcf11-205ENSMUST00000208255 Camsap1A2AHC3 1581 aa40.17■■■■■ 4.02
Pcf11-205ENSMUST00000208255 Chic1Q8CBW7 227 aa40.1■■■■■ 4.01
Pcf11-205ENSMUST00000208255 Il27Q8K3I6 234 aa40.1■■■■■ 4.01
Pcf11-205ENSMUST00000208255 Kif21aQ9QXL2 1672 aa40.05■■■■■ 4
Pcf11-205ENSMUST00000208255 Top2aQ01320 1528 aaKnown RBP39.93■■■■□ 3.98
Pcf11-205ENSMUST00000208255 LrpprcQ6PB66 1392 aaKnown RBP39.92■■■■□ 3.98
Pcf11-205ENSMUST00000208255 Dhx29Q6PGC1 1365 aaKnown RBP39.81■■■■□ 3.96
Pcf11-205ENSMUST00000208255 Lrriq1Q0P5X1 1673 aa39.78■■■■□ 3.96
Pcf11-205ENSMUST00000208255 PogzQ8BZH4 1409 aaKnown RBP39.73■■■■□ 3.95
Pcf11-205ENSMUST00000208255 Grin2bQ01097 1482 aa39.73■■■■□ 3.95
Pcf11-205ENSMUST00000208255 Crocc2F6XLV1 1638 aa39.62■■■■□ 3.93
Pcf11-205ENSMUST00000208255 Duox2A2AQ99 1517 aa39.56■■■■□ 3.92
Pcf11-205ENSMUST00000208255 NrkQ9R0G8 1455 aa39.53■■■■□ 3.92
Pcf11-205ENSMUST00000208255 Plb1Q3TTY0 1478 aa39.5■■■■□ 3.91
Pcf11-205ENSMUST00000208255 Urb2E9Q7L1 1524 aaKnown RBP39.49■■■■□ 3.91
Pcf11-205ENSMUST00000208255 Efcab5A0JP43 1406 aa39.47■■■■□ 3.91
Pcf11-205ENSMUST00000208255 Shroom4Q1W617 1475 aa39.35■■■■□ 3.89
Pcf11-205ENSMUST00000208255 PtprkP35822 1457 aa39.28■■■■□ 3.88
Pcf11-205ENSMUST00000208255 Ift140E9PY46 1464 aa39.25■■■■□ 3.87
Pcf11-205ENSMUST00000208255 Gab3Q8BSM5 595 aa39.24■■■■□ 3.87
Pcf11-205ENSMUST00000208255 Eif4g3Q80XI3 1579 aaKnown RBP39.24■■■■□ 3.87
Pcf11-205ENSMUST00000208255 Samd9lQ69Z37 1561 aa39.21■■■■□ 3.87
Pcf11-205ENSMUST00000208255 Rapgef2Q8CHG7 1496 aa39.16■■■■□ 3.86
Pcf11-205ENSMUST00000208255 Npm2Q80W85 207 aa39.12■■■■□ 3.85
Pcf11-205ENSMUST00000208255 Disp1Q3TDN0 1521 aa39.07■■■■□ 3.84
Pcf11-205ENSMUST00000208255 Rad54l2Q99NG0 1466 aa38.95■■■■□ 3.83
Pcf11-205ENSMUST00000208255 Pbrm1Q8BSQ9 1634 aaKnown RBP38.94■■■■□ 3.82
Pcf11-205ENSMUST00000208255 Zeb1Q64318 1117 aa38.92■■■■□ 3.82
Pcf11-205ENSMUST00000208255 SynmQ70IV5 1561 aa38.9■■■■□ 3.82
Pcf11-205ENSMUST00000208255 Eif4g1Q6NZJ6 1600 aaKnown RBP38.89■■■■□ 3.82
Pcf11-205ENSMUST00000208255 Mroh2bQ7M6Y6 1581 aa38.88■■■■□ 3.81
Pcf11-205ENSMUST00000208255 Nup160Q9Z0W3 1402 aaKnown RBP38.88■■■■□ 3.81
Pcf11-205ENSMUST00000208255 Rusc2Q80U22 1514 aa38.88■■■■□ 3.81
Pcf11-205ENSMUST00000208255 Grin2aP35436 1464 aa38.83■■■■□ 3.81
Pcf11-205ENSMUST00000208255 Magi3Q9EQJ9 1476 aa38.83■■■■□ 3.81
Pcf11-205ENSMUST00000208255 Cep162Q6ZQ06 1403 aa38.82■■■■□ 3.8
Pcf11-205ENSMUST00000208255 Cc2d2bA0A286YDU8 1405 aa38.81■■■■□ 3.8
Pcf11-205ENSMUST00000208255 Setd1bQ8CFT2 1985 aa38.77■■■■□ 3.8
Pcf11-205ENSMUST00000208255 Arhgap35Q91YM2 1499 aa38.77■■■■□ 3.8
Pcf11-205ENSMUST00000208255 Map3k1P53349 1493 aa38.74■■■■□ 3.79
Pcf11-205ENSMUST00000208255 Pla2r1Q62028 1487 aa38.69■■■■□ 3.78
Pcf11-205ENSMUST00000208255 Gpatch8A2A6A1 1505 aa38.64■■■■□ 3.78
Pcf11-205ENSMUST00000208255 Carmil1Q6EDY6 1374 aa38.58■■■■□ 3.77
Pcf11-205ENSMUST00000208255 AqrQ8CFQ3 1481 aaKnown RBP38.58■■■■□ 3.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms