RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Gm35339A0A140LHH9 1649 aa52,23■■■■■ 5,95
Pcf11-205ENSMUST00000208255 NischQ80TM9 1593 aa51,94■■■■■ 5,9
Pcf11-205ENSMUST00000208255 Abcc9P70170 1546 aa50,33■■■■■ 5,65
Pcf11-205ENSMUST00000208255 Abcc8B2RUS7 1588 aa49,97■■■■■ 5,59
Pcf11-205ENSMUST00000208255 ScribQ80U72 1612 aa47,64■■■■■ 5,22
Pcf11-205ENSMUST00000208255 NacadQ5SWP3 1504 aa46,34■■■■■ 5,01
Pcf11-205ENSMUST00000208255 Kdm5dQ62240 1548 aa46,3■■■■■ 5
Pcf11-205ENSMUST00000208255 Dcaf1Q80TR8 1506 aa46,29■■■■■ 5
Pcf11-205ENSMUST00000208255 Rhox8Q6VSS7 320 aa45,72■■■■■ 4,91
Pcf11-205ENSMUST00000208255 Sycp2Q9CUU3 1500 aa45,37■■■■■ 4,85
Pcf11-205ENSMUST00000208255 Rb1cc1Q9ESK9 1588 aa45,32■■■■■ 4,85
Pcf11-205ENSMUST00000208255 Ccdc180J3QNE4 1664 aa44,88■■■■■ 4,78
Pcf11-205ENSMUST00000208255 Baz1aO88379 1555 aa44,76■■■■■ 4,76
Pcf11-205ENSMUST00000208255 BicraF8VPZ9 1578 aa44,56■■■■■ 4,72
Pcf11-205ENSMUST00000208255 Crybg2B7ZCC2 1516 aa44,54■■■■■ 4,72
Pcf11-205ENSMUST00000208255 Zcchc6Q5BLK4 1491 aaKnown RBP43,96■■■■■ 4,63
Pcf11-205ENSMUST00000208255 Rtl1Q7M732 1744 aa43,85■■■■■ 4,61
Pcf11-205ENSMUST00000208255 Smarca2Q6DIC0 1577 aa43,52■■■■■ 4,56
Pcf11-205ENSMUST00000208255 Pds5bQ4VA53 1446 aaKnown RBP43,24■■■■■ 4,51
Pcf11-205ENSMUST00000208255 Cecr2E9Q2Z1 1453 aa43,02■■■■■ 4,48
Pcf11-205ENSMUST00000208255 Atad2bE9Q166 1460 aaKnown RBP42,98■■■■■ 4,47
Pcf11-205ENSMUST00000208255 Smarca4Q3TKT4 1613 aaKnown RBP42,93■■■■■ 4,46
Pcf11-205ENSMUST00000208255 Ccdc136Q3TVA9 1136 aa42,64■■■■■ 4,42
Pcf11-205ENSMUST00000208255 Iqgap2Q3UQ44 1575 aa42,57■■■■■ 4,4
Pcf11-205ENSMUST00000208255 Thoc2B1AZI6 1594 aaKnown RBP42,49■■■■■ 4,39
Pcf11-205ENSMUST00000208255 Brd4Q9ESU6 1400 aaKnown RBP42,41■■■■■ 4,38
Pcf11-205ENSMUST00000208255 Ercc6F8VPZ5 1481 aa42,33■■■■■ 4,37
Pcf11-205ENSMUST00000208255 CftrP26361 1476 aa42,24■■■■■ 4,35
Pcf11-205ENSMUST00000208255 Synj1Q8CHC4 1574 aa42,2■■■■■ 4,35
Pcf11-205ENSMUST00000208255 Cttnbp2B9EJA2 1648 aa42,17■■■■■ 4,34
Pcf11-205ENSMUST00000208255 Trim41Q5NCC3 630 aa42,12■■■■■ 4,33
Pcf11-205ENSMUST00000208255 Dnajc5bQ9CQ94 199 aa42,12■■■■■ 4,33
Pcf11-205ENSMUST00000208255 Wdr62Q3U3T8 1523 aa42,08■■■■■ 4,33
Pcf11-205ENSMUST00000208255 Frmpd1A2AKB4 1549 aa42,02■■■■■ 4,32
Pcf11-205ENSMUST00000208255 Cc2d2aQ8CFW7 1633 aa41,87■■■■■ 4,29
Pcf11-205ENSMUST00000208255 Fam135aQ6NS59 1506 aa41,72■■■■■ 4,27
Pcf11-205ENSMUST00000208255 Phldb1Q6PDH0 1371 aaKnown RBP41,66■■■■■ 4,26
Pcf11-205ENSMUST00000208255 Esf1Q3V1V3 845 aaKnown RBP41,62■■■■■ 4,25
Pcf11-205ENSMUST00000208255 Unc13aQ4KUS2 1712 aa41,42■■■■■ 4,22
Pcf11-205ENSMUST00000208255 Baz1bQ9Z277 1479 aa41,35■■■■■ 4,21
Pcf11-205ENSMUST00000208255 Ubl4bQ9CQ84 188 aa41,24■■■■■ 4,19
Pcf11-205ENSMUST00000208255 Golga3P55937 1487 aa41,18■■■■■ 4,18
Pcf11-205ENSMUST00000208255 Top2bQ64511 1612 aa41,01■■■■■ 4,16
Pcf11-205ENSMUST00000208255 Cngb1E1AZ71 1325 aa41■■■■■ 4,15
Pcf11-205ENSMUST00000208255 Rsf1E9PWW9 1441 aaKnown RBP40,98■■■■■ 4,15
Pcf11-205ENSMUST00000208255 Lamc3Q9R0B6 1581 aa40,83■■■■■ 4,13
Pcf11-205ENSMUST00000208255 Kif15Q6P9L6 1387 aa40,82■■■■■ 4,13
Pcf11-205ENSMUST00000208255 Mrc2Q64449 1479 aa40,78■■■■■ 4,12
Pcf11-205ENSMUST00000208255 HrcG5E8J6 738 aa40,72■■■■■ 4,11
Pcf11-205ENSMUST00000208255 Cux2P70298 1426 aa40,61■■■■■ 4,09
Pcf11-205ENSMUST00000208255 TnnQ80Z71 1560 aa40,59■■■■■ 4,09
Pcf11-205ENSMUST00000208255 Fmn1Q05860 1466 aa40,56■■■■■ 4,08
Pcf11-205ENSMUST00000208255 Npm1Q61937 292 aaKnown RBP40,3■■■■■ 4,04
Pcf11-205ENSMUST00000208255 Ccdc88bQ4QRL3 1481 aa40,27■■■■■ 4,04
Pcf11-205ENSMUST00000208255 Ccdc18Q640L5 1455 aa40,27■■■■■ 4,04
Pcf11-205ENSMUST00000208255 Cep164Q5DU05 1446 aa40,2■■■■■ 4,03
Pcf11-205ENSMUST00000208255 Camsap1A2AHC3 1581 aa40,17■■■■■ 4,02
Pcf11-205ENSMUST00000208255 Chic1Q8CBW7 227 aa40,1■■■■■ 4,01
Pcf11-205ENSMUST00000208255 Il27Q8K3I6 234 aa40,1■■■■■ 4,01
Pcf11-205ENSMUST00000208255 Kif21aQ9QXL2 1672 aa40,05■■■■■ 4
Pcf11-205ENSMUST00000208255 Top2aQ01320 1528 aaKnown RBP39,93■■■■□ 3,98
Pcf11-205ENSMUST00000208255 LrpprcQ6PB66 1392 aaKnown RBP39,92■■■■□ 3,98
Pcf11-205ENSMUST00000208255 Dhx29Q6PGC1 1365 aaKnown RBP39,81■■■■□ 3,96
Pcf11-205ENSMUST00000208255 Lrriq1Q0P5X1 1673 aa39,78■■■■□ 3,96
Pcf11-205ENSMUST00000208255 PogzQ8BZH4 1409 aaKnown RBP39,73■■■■□ 3,95
Pcf11-205ENSMUST00000208255 Grin2bQ01097 1482 aa39,73■■■■□ 3,95
Pcf11-205ENSMUST00000208255 Crocc2F6XLV1 1638 aa39,62■■■■□ 3,93
Pcf11-205ENSMUST00000208255 Duox2A2AQ99 1517 aa39,56■■■■□ 3,92
Pcf11-205ENSMUST00000208255 NrkQ9R0G8 1455 aa39,53■■■■□ 3,92
Pcf11-205ENSMUST00000208255 Plb1Q3TTY0 1478 aa39,5■■■■□ 3,91
Pcf11-205ENSMUST00000208255 Urb2E9Q7L1 1524 aaKnown RBP39,49■■■■□ 3,91
Pcf11-205ENSMUST00000208255 Efcab5A0JP43 1406 aa39,47■■■■□ 3,91
Pcf11-205ENSMUST00000208255 Shroom4Q1W617 1475 aa39,35■■■■□ 3,89
Pcf11-205ENSMUST00000208255 PtprkP35822 1457 aa39,28■■■■□ 3,88
Pcf11-205ENSMUST00000208255 Ift140E9PY46 1464 aa39,25■■■■□ 3,87
Pcf11-205ENSMUST00000208255 Gab3Q8BSM5 595 aa39,24■■■■□ 3,87
Pcf11-205ENSMUST00000208255 Eif4g3Q80XI3 1579 aaKnown RBP39,24■■■■□ 3,87
Pcf11-205ENSMUST00000208255 Samd9lQ69Z37 1561 aa39,21■■■■□ 3,87
Pcf11-205ENSMUST00000208255 Rapgef2Q8CHG7 1496 aa39,16■■■■□ 3,86
Pcf11-205ENSMUST00000208255 Npm2Q80W85 207 aa39,12■■■■□ 3,85
Pcf11-205ENSMUST00000208255 Disp1Q3TDN0 1521 aa39,07■■■■□ 3,84
Pcf11-205ENSMUST00000208255 Rad54l2Q99NG0 1466 aa38,95■■■■□ 3,83
Pcf11-205ENSMUST00000208255 Pbrm1Q8BSQ9 1634 aaKnown RBP38,94■■■■□ 3,82
Pcf11-205ENSMUST00000208255 Zeb1Q64318 1117 aa38,92■■■■□ 3,82
Pcf11-205ENSMUST00000208255 SynmQ70IV5 1561 aa38,9■■■■□ 3,82
Pcf11-205ENSMUST00000208255 Eif4g1Q6NZJ6 1600 aaKnown RBP38,89■■■■□ 3,82
Pcf11-205ENSMUST00000208255 Mroh2bQ7M6Y6 1581 aa38,88■■■■□ 3,81
Pcf11-205ENSMUST00000208255 Nup160Q9Z0W3 1402 aaKnown RBP38,88■■■■□ 3,81
Pcf11-205ENSMUST00000208255 Rusc2Q80U22 1514 aa38,88■■■■□ 3,81
Pcf11-205ENSMUST00000208255 Grin2aP35436 1464 aa38,83■■■■□ 3,81
Pcf11-205ENSMUST00000208255 Magi3Q9EQJ9 1476 aa38,83■■■■□ 3,81
Pcf11-205ENSMUST00000208255 Cep162Q6ZQ06 1403 aa38,82■■■■□ 3,8
Pcf11-205ENSMUST00000208255 Cc2d2bA0A286YDU8 1405 aa38,81■■■■□ 3,8
Pcf11-205ENSMUST00000208255 Setd1bQ8CFT2 1985 aa38,77■■■■□ 3,8
Pcf11-205ENSMUST00000208255 Arhgap35Q91YM2 1499 aa38,77■■■■□ 3,8
Pcf11-205ENSMUST00000208255 Map3k1P53349 1493 aa38,74■■■■□ 3,79
Pcf11-205ENSMUST00000208255 Pla2r1Q62028 1487 aa38,69■■■■□ 3,78
Pcf11-205ENSMUST00000208255 Gpatch8A2A6A1 1505 aa38,64■■■■□ 3,78
Pcf11-205ENSMUST00000208255 Carmil1Q6EDY6 1374 aa38,58■■■■□ 3,77
Pcf11-205ENSMUST00000208255 AqrQ8CFQ3 1481 aaKnown RBP38,58■■■■□ 3,77
Retrieved 100 of 22,080 RNA–protein pairs in 9,5 ms