RNA–Protein interactions for RNA: ENSMUST00000190050.1

Gm28539-201, Transcript of Predicted gene 28539, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Gm28539, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539-201ENSMUST00000190050 B230307C23RikQ8BLB2 64 aa8.06□□□□□ -1.12
Gm28539-201ENSMUST00000190050 BikO70337 150 aa8.05□□□□□ -1.12
Gm28539-201ENSMUST00000190050 A0A286YE49 62 aa8.04□□□□□ -1.12
Gm28539-201ENSMUST00000190050 SacsQ9JLC8 4582 aa8.04□□□□□ -1.12
Gm28539-201ENSMUST00000190050 Scgb1b2O35176 93 aa8.03□□□□□ -1.12
Gm28539-201ENSMUST00000190050 Ryr2E9Q401 4966 aaKnown RBP8.03□□□□□ -1.12
Gm28539-201ENSMUST00000190050 Tmem258P61166 79 aa8.02□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Pkhd1l1Q80ZA4 4249 aa8.02□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Samd13D3YUG0 102 aa8.02□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Igkv3-3A0A140T8Q0 119 aa8.01□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Gm19935A0A1B0GSF9 52 aa8□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Mrpl55Q9CZ83 127 aa7.98□□□□□ -1.13
Gm28539-201ENSMUST00000190050 Smim20D3Z7Q2 69 aa7.95□□□□□ -1.14
Gm28539-201ENSMUST00000190050 Coa6Q8BGD8 79 aa7.94□□□□□ -1.14
Gm28539-201ENSMUST00000190050 Spaca4Q80ZQ0 127 aa7.94□□□□□ -1.14
Gm28539-201ENSMUST00000190050 Spint4Q9D263 159 aa7.94□□□□□ -1.14
Gm28539-201ENSMUST00000190050 Rps28P62858 69 aaKnown RBP7.92□□□□□ -1.14
Gm28539-201ENSMUST00000190050 1700074P13RikQ9D9G7 251 aa7.91□□□□□ -1.14
Gm28539-201ENSMUST00000190050 Cypt15B1AXS0 87 aa7.9□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Atox1O08997 68 aaKnown RBP7.89□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Vps13bQ80TY5 3993 aa7.89□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Smlr1J3QMJ4 66 aa7.89□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Defb12Q8K4N3 78 aa7.88□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Rps29P62274 56 aa7.86□□□□□ -1.15
Gm28539-201ENSMUST00000190050 Dph3Q8K0W9 82 aa7.83□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Kmt2cQ8BRH4 4903 aa7.82□□□□□ -1.16
Gm28539-201ENSMUST00000190050 RetnlbQ99P86 105 aa7.82□□□□□ -1.16
Gm28539-201ENSMUST00000190050 SnurfQ9WU12 71 aa7.82□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Pet100P0DJE0 76 aa7.8□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Ryr1E9PZQ0 5035 aa7.79□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Gm10267M0QWD8 85 aa7.79□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Chtf8P0CG14 533 aa7.78□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Serp1Q9Z1W5 66 aa7.78□□□□□ -1.16
Gm28539-201ENSMUST00000190050 Coa5Q99M07 74 aa7.77□□□□□ -1.17
Gm28539-201ENSMUST00000190050 Krtap19-5O08632 62 aa7.76□□□□□ -1.17
Gm28539-201ENSMUST00000190050 Defb13Q8R2I4 64 aa7.75□□□□□ -1.17
Gm28539-201ENSMUST00000190050 Dnah8Q91XQ0 4731 aa7.73□□□□□ -1.17
Gm28539-201ENSMUST00000190050 Cdc42se1Q8BHL7 80 aa7.7□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Gm10160F6Y577 67 aa7.69□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Gm11939A2A592 99 aa7.68□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Brk1Q91VR8 75 aa7.68□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Fat3Q8BNA6 4555 aa7.68□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Krtap3-2Q9D638 99 aa7.68□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Krtap3-3Q9D7P0 99 aa7.68□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Lrp1Q91ZX7 4545 aaKnown RBP7.67□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Gm26620Q9CY65 116 aa7.65□□□□□ -1.18
Gm28539-201ENSMUST00000190050 Gm10643Q3URG9 111 aa7.64□□□□□ -1.19
Gm28539-201ENSMUST00000190050 D6Ertd527eA0A0N4SWI3 464 aa7.58□□□□□ -1.2
Gm28539-201ENSMUST00000190050 A530084C06RikQ3UTW2 186 aa7.58□□□□□ -1.2
Gm28539-201ENSMUST00000190050 Gm21798J3QNU5 87 aa7.57□□□□□ -1.2
Gm28539-201ENSMUST00000190050 H2al1aQ5M8Q2 105 aa7.57□□□□□ -1.2
Gm28539-201ENSMUST00000190050 Gm10197F6QEY5 67 aa7.56□□□□□ -1.2
Gm28539-201ENSMUST00000190050 Defb38Q7TNV7 63 aa7.56□□□□□ -1.2
Gm28539-201ENSMUST00000190050 A930033H14RikG5E8X6 103 aa7.54□□□□□ -1.2
Gm28539-201ENSMUST00000190050 Abca13Q5SSE9 5034 aa7.53□□□□□ -1.2
Gm28539-201ENSMUST00000190050 Dnhd1D3Z2X2 4750 aa7.51□□□□□ -1.21
Gm28539-201ENSMUST00000190050 Phxr4P15974 95 aa7.48□□□□□ -1.21
Gm28539-201ENSMUST00000190050 2310079G19RikQ9D6L6 185 aa7.48□□□□□ -1.21
Gm28539-201ENSMUST00000190050 Gm5767A0A0J9YTU8 78 aa7.47□□□□□ -1.21
Gm28539-201ENSMUST00000190050 Gm9736A0A1W2P7N1 277 aa7.46□□□□□ -1.21
Gm28539-201ENSMUST00000190050 Gm10999F6Q4M4 69 aa7.46□□□□□ -1.21
Gm28539-201ENSMUST00000190050 Q8BGJ3 129 aa7.44□□□□□ -1.22
Gm28539-201ENSMUST00000190050 2310034C09RikQ9D746 214 aa7.43□□□□□ -1.22
Gm28539-201ENSMUST00000190050 SvipQ3UZP4 77 aa7.43□□□□□ -1.22
Gm28539-201ENSMUST00000190050 Mycbp2Q7TPH6 4711 aa7.42□□□□□ -1.22
Gm28539-201ENSMUST00000190050 Birc6O88738 4882 aa7.41□□□□□ -1.22
Gm28539-201ENSMUST00000190050 Gm4491E0CX42 125 aa7.41□□□□□ -1.22
Gm28539-201ENSMUST00000190050 Gm20661K7N787 53 aa7.4□□□□□ -1.22
Gm28539-201ENSMUST00000190050 Herc2Q4U2R1 4836 aa7.37□□□□□ -1.23
Gm28539-201ENSMUST00000190050 4930507D05RikQ8C9C9 103 aa7.35□□□□□ -1.23
Gm28539-201ENSMUST00000190050 Gm5965D3Z724 196 aa7.34□□□□□ -1.23
Gm28539-201ENSMUST00000190050 H2al1eQ810S6 105 aa7.34□□□□□ -1.23
Gm28539-201ENSMUST00000190050 Kiaa1109A2AAE1 5005 aa7.33□□□□□ -1.24
Gm28539-201ENSMUST00000190050 Rpl37Q9D823 97 aa7.28□□□□□ -1.24
Gm28539-201ENSMUST00000190050 Uqcr11Q9CPX8 56 aa7.26□□□□□ -1.25
Gm28539-201ENSMUST00000190050 Gm10337F7DEP7 55 aa7.25□□□□□ -1.25
Gm28539-201ENSMUST00000190050 H2al1bA0A087WP11 105 aa7.24□□□□□ -1.25
Gm28539-201ENSMUST00000190050 Limd2Q8BGB5 128 aa7.24□□□□□ -1.25
Gm28539-201ENSMUST00000190050 H2al1kJ3QP08 105 aa7.23□□□□□ -1.25
Gm28539-201ENSMUST00000190050 H2al1mQ9DAD9 105 aa7.23□□□□□ -1.25
Gm28539-201ENSMUST00000190050 9230102O04RikA2ASX7 82 aa7.23□□□□□ -1.25
Gm28539-201ENSMUST00000190050 Ndufb1P0DN34 57 aa7.23□□□□□ -1.25
Gm28539-201ENSMUST00000190050 4933415A04RikQ9D443 101 aa7.21□□□□□ -1.26
Gm28539-201ENSMUST00000190050 Krtap15-1Q9QZU5 150 aa7.21□□□□□ -1.26
Gm28539-201ENSMUST00000190050 Sox16Q62247 57 aa7.2□□□□□ -1.26
Gm28539-201ENSMUST00000190050 SptssbQ925E8 76 aa7.18□□□□□ -1.26
Gm28539-201ENSMUST00000190050 HydinQ80W93 5154 aa7.18□□□□□ -1.26
Gm28539-201ENSMUST00000190050 Defb1P56386 69 aa7.17□□□□□ -1.26
Gm28539-201ENSMUST00000190050 Rnase13Q5GAM7 153 aa7.17□□□□□ -1.26
Gm28539-201ENSMUST00000190050 Gm9821Q8K076 103 aa7.15□□□□□ -1.27
Gm28539-201ENSMUST00000190050 Gm17416Q30KP4 66 aa7.14□□□□□ -1.27
Gm28539-201ENSMUST00000190050 Cox6b2Q80ZN9 88 aa7.09□□□□□ -1.27
Gm28539-201ENSMUST00000190050 Lrp2A2ARV4 4660 aa7.03□□□□□ -1.28
Gm28539-201ENSMUST00000190050 PcloQ9QYX7 5068 aa6.96□□□□□ -1.3
Gm28539-201ENSMUST00000190050 2210017I01RikA0A0A6YVV1 95 aa6.93□□□□□ -1.3
Gm28539-201ENSMUST00000190050 Krtap3-1A2A591 98 aa6.91□□□□□ -1.3
Gm28539-201ENSMUST00000190050 Sec61bQ9CQS8 96 aaKnown RBP6.89□□□□□ -1.31
Gm28539-201ENSMUST00000190050 Lce1mQ9CR91 182 aa6.87□□□□□ -1.31
Gm28539-201ENSMUST00000190050 Sec61gP60060 68 aa6.86□□□□□ -1.31
Gm28539-201ENSMUST00000190050 Gm3646F6S692 53 aa6.85□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms