RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Igkv3-4A0A140T8Q4 119 aa5.38□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Sprr2jO70561 109 aa5.38□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Lce1mQ9CR91 182 aa5.38□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Gm44790A0A0N4SV91 103 aa5.37□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Krtap3-2Q9D638 99 aa5.37□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Krtap3-3Q9D7P0 99 aa5.37□□□□□ -1.55
Prpf39-201ENSMUST00000120580 D6Ertd527eA0A0N4SWI3 464 aa5.37□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Gm10401E9Q3K6 71 aa5.36□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Ube2aQ9Z255 152 aa5.35□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Ush2AQ2QI47 5193 aa5.35□□□□□ -1.55
Prpf39-201ENSMUST00000120580 D130052B06RikQ3UW13 202 aa5.34□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Rbm3O89086 153 aaKnown RBP5.34□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Gm37389A0A0A6YW05 95 aa5.34□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Mrpl34Q99N91 92 aa5.34□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Spint4Q9D263 159 aa5.34□□□□□ -1.55
Prpf39-201ENSMUST00000120580 Igkv3-10A0A0G2JGN0 119 aa5.33□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Defa21Q8C1P2 93 aa5.33□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Gm28230A0A0A0MQ91 144 aa5.33□□□□□ -1.56
Prpf39-201ENSMUST00000120580 4933415A04RikQ9D443 101 aa5.33□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Lamtor3O88653 124 aa5.32□□□□□ -1.56
Prpf39-201ENSMUST00000120580 A530084C06RikQ3UTW2 186 aa5.32□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Rps29P62274 56 aa5.32□□□□□ -1.56
Prpf39-201ENSMUST00000120580 MplkipQ9D011 178 aa5.31□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Pde6gP09174 87 aa5.31□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Dph3Q8K0W9 82 aa5.3□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Inafm2A0A1L1STD6 152 aa5.29□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Znf706Q9D115 76 aaKnown RBP5.29□□□□□ -1.56
Prpf39-201ENSMUST00000120580 Gm21886J3QJU9 214 aa5.28□□□□□ -1.56
Prpf39-201ENSMUST00000120580 RetnlbQ99P86 105 aa5.28□□□□□ -1.56
Prpf39-201ENSMUST00000120580 UqcrqQ9CQ69 82 aa5.27□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Igkv3-5A0A140T8M6 119 aa5.27□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Ccdc179J3QM76 67 aa5.25□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Mrpl55Q9CZ83 127 aa5.25□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Defa28D3Z1V9 94 aa5.24□□□□□ -1.57
Prpf39-201ENSMUST00000120580 BikO70337 150 aa5.24□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Serp1Q9Z1W5 66 aa5.24□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Gm12353A2AGJ4 60 aa5.23□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Ubr4A2AN08 5180 aa5.23□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Ubl5Q9EPV8 73 aa5.21□□□□□ -1.57
Prpf39-201ENSMUST00000120580 Coa5Q99M07 74 aa5.21□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Ndufc1Q9CQY9 76 aa5.21□□□□□ -1.58
Prpf39-201ENSMUST00000120580 GhrhP16043 103 aa5.2□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Cdc42se1Q8BHL7 80 aa5.19□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Defb12Q8K4N3 78 aa5.19□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Sfta2E9PXB6 77 aa5.18□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Spaca4Q80ZQ0 127 aa5.18□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Brk1Q91VR8 75 aa5.17□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Reg3aO09037 175 aa5.17□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Prr15lQ8JZM2 100 aa5.17□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Chtf8P0CG14 533 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 H2al1bA0A087WP11 105 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 H2al1kJ3QP08 105 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 H2al1eQ810S6 105 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 B230307C23RikQ8BLB2 64 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 H2al1mQ9DAD9 105 aa5.15□□□□□ -1.58
Prpf39-201ENSMUST00000120580 Samd13D3YUG0 102 aa5.14□□□□□ -1.59
Prpf39-201ENSMUST00000120580 2310079G19RikQ9D6L6 185 aa5.14□□□□□ -1.59
Prpf39-201ENSMUST00000120580 Coa6Q8BGD8 79 aa5.13□□□□□ -1.59
Prpf39-201ENSMUST00000120580 Gm5965D3Z724 196 aa5.12□□□□□ -1.59
Prpf39-201ENSMUST00000120580 ZanO88799 5376 aa5.12□□□□□ -1.59
Prpf39-201ENSMUST00000120580 Spink8Q09TK9 105 aa5.11□□□□□ -1.59
Prpf39-201ENSMUST00000120580 4932415D10RikA0A1W2P6U8 4986 aa5.1□□□□□ -1.59
Prpf39-201ENSMUST00000120580 Cypt15B1AXS0 87 aa5.09□□□□□ -1.59
Prpf39-201ENSMUST00000120580 Gm10197F6QEY5 67 aa5.08□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Gm20604F8WIA3 75 aa5.08□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Gm9789Q8BIG3 52 aa5.08□□□□□ -1.6
Prpf39-201ENSMUST00000120580 A930033H14RikG5E8X6 103 aa5.08□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Rnf213E9Q555 5152 aaKnown RBP5.07□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Igkv3-3A0A140T8Q0 119 aa5.07□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Gm10337F7DEP7 55 aa5.04□□□□□ -1.6
Prpf39-201ENSMUST00000120580 Gm10160F6Y577 67 aa5□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Gm21798J3QNU5 87 aa4.99□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Phxr4P15974 95 aa4.99□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Gm5767A0A0J9YTU8 78 aa4.98□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Gm18596A0A1W2P860 280 aa4.98□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Krtap16-3Q8C1I6 86 aa4.98□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Gm7735D3YX18 52 aa4.97□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Prm1P02319 51 aa4.97□□□□□ -1.61
Prpf39-201ENSMUST00000120580 Krtap1-3A2A588 173 aa4.97□□□□□ -1.61
Prpf39-201ENSMUST00000120580 1700074P13RikQ9D9G7 251 aa4.95□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Krtap19-1Q925H2 87 aa4.95□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Gm3646F6S692 53 aa4.93□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Gm26620Q9CY65 116 aa4.93□□□□□ -1.62
Prpf39-201ENSMUST00000120580 A0A286YE49 62 aa4.92□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Smlr1J3QMJ4 66 aa4.92□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Fat4Q2PZL6 4981 aa4.92□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Gm10267M0QWD8 85 aa4.92□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Rpl37Q9D823 97 aa4.91□□□□□ -1.62
Prpf39-201ENSMUST00000120580 1700042G07RikB1AUF7 90 aa4.9□□□□□ -1.62
Prpf39-201ENSMUST00000120580 Krtap19-3Q925H6 87 aa4.9□□□□□ -1.63
Prpf39-201ENSMUST00000120580 SspoQ8CG65 4998 aa4.88□□□□□ -1.63
Prpf39-201ENSMUST00000120580 Pet100P0DJE0 76 aa4.87□□□□□ -1.63
Prpf39-201ENSMUST00000120580 Atox1O08997 68 aaKnown RBP4.85□□□□□ -1.63
Prpf39-201ENSMUST00000120580 2310034C09RikQ9D746 214 aa4.83□□□□□ -1.64
Prpf39-201ENSMUST00000120580 Gm17416Q30KP4 66 aa4.82□□□□□ -1.64
Prpf39-201ENSMUST00000120580 Gm20661K7N787 53 aa4.79□□□□□ -1.64
Prpf39-201ENSMUST00000120580 Krtap15-1Q9QZU5 150 aa4.79□□□□□ -1.64
Prpf39-201ENSMUST00000120580 Gm4491E0CX42 125 aa4.78□□□□□ -1.64
Prpf39-201ENSMUST00000120580 Defb38Q7TNV7 63 aa4.76□□□□□ -1.65
Prpf39-201ENSMUST00000120580 Krtap1-4Q3V2D6 188 aa4.75□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms