RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Coa5Q99M07 74 aa14,49□□□□□ -0,09
Ubp1-203ENSMUST00000116492 Ccdc179J3QM76 67 aa14,48□□□□□ -0,09
Ubp1-203ENSMUST00000116492 Tnp2P11378 117 aa14,48□□□□□ -0,09
Ubp1-203ENSMUST00000116492 1600014C23RikQ9DAX4 101 aa14,48□□□□□ -0,09
Ubp1-203ENSMUST00000116492 Defb39Q70KL3 74 aa14,47□□□□□ -0,09
Ubp1-203ENSMUST00000116492 Gm16253D3Z167 63 aa14,41□□□□□ -0,1
Ubp1-203ENSMUST00000116492 Dnah7cA0A087WR13 4024 aa14,39□□□□□ -0,11
Ubp1-203ENSMUST00000116492 Anapc11Q9CPX9 84 aa14,39□□□□□ -0,11
Ubp1-203ENSMUST00000116492 Igkv3-3A0A140T8Q0 119 aa14,36□□□□□ -0,11
Ubp1-203ENSMUST00000116492 Krtap14O08640 167 aa14,36□□□□□ -0,11
Ubp1-203ENSMUST00000116492 Dnah5Q8VHE6 4621 aa14,34□□□□□ -0,11
Ubp1-203ENSMUST00000116492 Gm10197F6QEY5 67 aa14,33□□□□□ -0,12
Ubp1-203ENSMUST00000116492 Gm10267M0QWD8 85 aa14,32□□□□□ -0,12
Ubp1-203ENSMUST00000116492 Chtf8P0CG14 533 aa14,31□□□□□ -0,12
Ubp1-203ENSMUST00000116492 Dnah7aE9Q0T8 4024 aa14,31□□□□□ -0,12
Ubp1-203ENSMUST00000116492 Bean1Q9EQG5 255 aa14,3□□□□□ -0,12
Ubp1-203ENSMUST00000116492 FcgbpE9Q0B5 2583 aa14,28□□□□□ -0,12
Ubp1-203ENSMUST00000116492 Krtap10-4Q08EG8 221 aa14,21□□□□□ -0,13
Ubp1-203ENSMUST00000116492 Hectd4E9Q2E4 4418 aa14,2□□□□□ -0,14
Ubp1-203ENSMUST00000116492 Gm10160F6Y577 67 aa14,17□□□□□ -0,14
Ubp1-203ENSMUST00000116492 Dnah2P0C6F1 4456 aa14,15□□□□□ -0,14
Ubp1-203ENSMUST00000116492 Vps13dB1ART2 4390 aa14,14□□□□□ -0,15
Ubp1-203ENSMUST00000116492 ApobE9Q414 4505 aa14,09□□□□□ -0,15
Ubp1-203ENSMUST00000116492 Phxr4P15974 95 aa14,08□□□□□ -0,16
Ubp1-203ENSMUST00000116492 Pkd1O08852 4293 aa14,07□□□□□ -0,16
Ubp1-203ENSMUST00000116492 Cypt15B1AXS0 87 aa14,03□□□□□ -0,16
Ubp1-203ENSMUST00000116492 Krtap13O88375 197 aa14,03□□□□□ -0,16
Ubp1-203ENSMUST00000116492 Sox16Q62247 57 aa14,01□□□□□ -0,17
Ubp1-203ENSMUST00000116492 Spaca4Q80ZQ0 127 aa14□□□□□ -0,17
Ubp1-203ENSMUST00000116492 Defb13Q8R2I4 64 aa13,99□□□□□ -0,17
Ubp1-203ENSMUST00000116492 Defb38Q7TNV7 63 aa13,99□□□□□ -0,17
Ubp1-203ENSMUST00000116492 Stard9Q80TF6 4561 aa13,98□□□□□ -0,17
Ubp1-203ENSMUST00000116492 OxtP35454 125 aa13,94□□□□□ -0,18
Ubp1-203ENSMUST00000116492 Gm10643Q3URG9 111 aa13,93□□□□□ -0,18
Ubp1-203ENSMUST00000116492 Lrp1bQ9JI18 4599 aa13,9□□□□□ -0,18
Ubp1-203ENSMUST00000116492 4933415A04RikQ9D443 101 aa13,87□□□□□ -0,19
Ubp1-203ENSMUST00000116492 Gm20661K7N787 53 aa13,82□□□□□ -0,2
Ubp1-203ENSMUST00000116492 Krtap10-10A0A1W2P7T6 217 aa13,81□□□□□ -0,2
Ubp1-203ENSMUST00000116492 Gm21798J3QNU5 87 aa13,81□□□□□ -0,2
Ubp1-203ENSMUST00000116492 Gm2696A0A1W2P709 240 aa13,78□□□□□ -0,2
Ubp1-203ENSMUST00000116492 Pkhd1E9PZ36 4059 aa13,73□□□□□ -0,21
Ubp1-203ENSMUST00000116492 Wfdc3Q14AE4 130 aa13,72□□□□□ -0,21
Ubp1-203ENSMUST00000116492 Ndufb1P0DN34 57 aa13,64□□□□□ -0,23
Ubp1-203ENSMUST00000116492 Fat1A0A1L1SQU7 4645 aa13,62□□□□□ -0,23
Ubp1-203ENSMUST00000116492 Dync1h1Q9JHU4 4644 aaKnown RBP13,59□□□□□ -0,23
Ubp1-203ENSMUST00000116492 Gm10999F6Q4M4 69 aa13,58□□□□□ -0,23
Ubp1-203ENSMUST00000116492 Fat2Q5F226 4351 aa13,58□□□□□ -0,24
Ubp1-203ENSMUST00000116492 SacsQ9JLC8 4582 aa13,57□□□□□ -0,24
Ubp1-203ENSMUST00000116492 Limd2Q8BGB5 128 aa13,53□□□□□ -0,24
Ubp1-203ENSMUST00000116492 SptssbQ925E8 76 aa13,53□□□□□ -0,24
Ubp1-203ENSMUST00000116492 Rps29P62274 56 aa13,52□□□□□ -0,24
Ubp1-203ENSMUST00000116492 Uqcr11Q9CPX8 56 aa13,52□□□□□ -0,25
Ubp1-203ENSMUST00000116492 Q8BGJ3 129 aa13,49□□□□□ -0,25
Ubp1-203ENSMUST00000116492 Sec61gP60060 68 aa13,49□□□□□ -0,25
Ubp1-203ENSMUST00000116492 Krtap3-2Q9D638 99 aa13,48□□□□□ -0,25
Ubp1-203ENSMUST00000116492 Krtap3-3Q9D7P0 99 aa13,48□□□□□ -0,25
Ubp1-203ENSMUST00000116492 2310034C09RikQ9D746 214 aa13,48□□□□□ -0,25
Ubp1-203ENSMUST00000116492 Gm26620Q9CY65 116 aa13,45□□□□□ -0,26
Ubp1-203ENSMUST00000116492 RetnlbQ99P86 105 aa13,42□□□□□ -0,26
Ubp1-203ENSMUST00000116492 2310079G19RikQ9D6L6 185 aa13,42□□□□□ -0,26
Ubp1-203ENSMUST00000116492 A930033H14RikG5E8X6 103 aa13,38□□□□□ -0,27
Ubp1-203ENSMUST00000116492 4930507D05RikQ8C9C9 103 aa13,3□□□□□ -0,28
Ubp1-203ENSMUST00000116492 Gm11939A2A592 99 aa13,28□□□□□ -0,28
Ubp1-203ENSMUST00000116492 Gm3646F6S692 53 aa13,28□□□□□ -0,28
Ubp1-203ENSMUST00000116492 1700042G07RikB1AUF7 90 aa13,27□□□□□ -0,28
Ubp1-203ENSMUST00000116492 Ryr3A2AGL3 4863 aa13,24□□□□□ -0,29
Ubp1-203ENSMUST00000116492 Gm4491E0CX42 125 aa13,22□□□□□ -0,29
Ubp1-203ENSMUST00000116492 9230102O04RikA2ASX7 82 aa13,22□□□□□ -0,29
Ubp1-203ENSMUST00000116492 Defb1P56386 69 aa13,18□□□□□ -0,3
Ubp1-203ENSMUST00000116492 D6Ertd527eA0A0N4SWI3 464 aa13,13□□□□□ -0,31
Ubp1-203ENSMUST00000116492 Pkhd1l1Q80ZA4 4249 aa13,11□□□□□ -0,31
Ubp1-203ENSMUST00000116492 Vps13bQ80TY5 3993 aa13,01□□□□□ -0,33
Ubp1-203ENSMUST00000116492 Gm5767A0A0J9YTU8 78 aa12,95□□□□□ -0,34
Ubp1-203ENSMUST00000116492 Lrp1Q91ZX7 4545 aaKnown RBP12,94□□□□□ -0,34
Ubp1-203ENSMUST00000116492 Ryr2E9Q401 4966 aaKnown RBP12,93□□□□□ -0,34
Ubp1-203ENSMUST00000116492 Krtap19-5O08632 62 aa12,92□□□□□ -0,34
Ubp1-203ENSMUST00000116492 Ndufs5Q99LY9 106 aa12,88□□□□□ -0,35
Ubp1-203ENSMUST00000116492 Kmt2cQ8BRH4 4903 aa12,87□□□□□ -0,35
Ubp1-203ENSMUST00000116492 Cox6b2Q80ZN9 88 aa12,77□□□□□ -0,36
Ubp1-203ENSMUST00000116492 Fat3Q8BNA6 4555 aa12,77□□□□□ -0,37
Ubp1-203ENSMUST00000116492 Gm9736A0A1W2P7N1 277 aa12,66□□□□□ -0,38
Ubp1-203ENSMUST00000116492 Gm9821Q8K076 103 aa12,63□□□□□ -0,39
Ubp1-203ENSMUST00000116492 Dnah8Q91XQ0 4731 aa12,62□□□□□ -0,39
Ubp1-203ENSMUST00000116492 Rnase13Q5GAM7 153 aa12,6□□□□□ -0,39
Ubp1-203ENSMUST00000116492 Rpl37Q9D823 97 aa12,59□□□□□ -0,39
Ubp1-203ENSMUST00000116492 Ryr1E9PZQ0 5035 aa12,59□□□□□ -0,39
Ubp1-203ENSMUST00000116492 Gm5965D3Z724 196 aa12,57□□□□□ -0,4
Ubp1-203ENSMUST00000116492 Krtap15-1Q9QZU5 150 aa12,53□□□□□ -0,4
Ubp1-203ENSMUST00000116492 Pla2g10Q9QXX3 151 aa12,51□□□□□ -0,41
Ubp1-203ENSMUST00000116492 Mycbp2Q7TPH6 4711 aa12,49□□□□□ -0,41
Ubp1-203ENSMUST00000116492 Abca13Q5SSE9 5034 aa12,44□□□□□ -0,42
Ubp1-203ENSMUST00000116492 Gm20537G3UYK7 97 aa12,43□□□□□ -0,42
Ubp1-203ENSMUST00000116492 Gm17416Q30KP4 66 aa12,38□□□□□ -0,43
Ubp1-203ENSMUST00000116492 Gm17606F6ZL36 78 aa12,35□□□□□ -0,43
Ubp1-203ENSMUST00000116492 Gm9955Q8CEJ8 102 aa12,29□□□□□ -0,44
Ubp1-203ENSMUST00000116492 Gm10382Q3V0T5 144 aa12,26□□□□□ -0,45
Ubp1-203ENSMUST00000116492 Gm3880A0A1B0GSB3 72 aa12,18□□□□□ -0,46
Ubp1-203ENSMUST00000116492 Dnhd1D3Z2X2 4750 aa12,16□□□□□ -0,46
Ubp1-203ENSMUST00000116492 Krtap3-1A2A591 98 aa12,14□□□□□ -0,47
Ubp1-203ENSMUST00000116492 2210017I01RikA0A0A6YVV1 95 aa12,08□□□□□ -0,48
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms