RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm28539A0A087WSL9 92 aa15,12■□□□□ 0,01
Tpm1-216ENSMUST00000113707 BikO70337 150 aa15,09■□□□□ 0,01
Tpm1-216ENSMUST00000113707 Spaca4Q80ZQ0 127 aa15,04■□□□□ -0
Tpm1-216ENSMUST00000113707 Igkv3-3A0A140T8Q0 119 aa15,01□□□□□ -0,01
Tpm1-216ENSMUST00000113707 Ryr2E9Q401 4966 aaKnown RBP15,01□□□□□ -0,01
Tpm1-216ENSMUST00000113707 Dph3Q8K0W9 82 aa15□□□□□ -0,01
Tpm1-216ENSMUST00000113707 Fat2Q5F226 4351 aa14,99□□□□□ -0,01
Tpm1-216ENSMUST00000113707 Scgb1b2O35176 93 aa14,99□□□□□ -0,01
Tpm1-216ENSMUST00000113707 Pcp4P63054 62 aa14,97□□□□□ -0,01
Tpm1-216ENSMUST00000113707 RetnlbQ99P86 105 aa14,96□□□□□ -0,01
Tpm1-216ENSMUST00000113707 SmcpP15265 143 aa14,95□□□□□ -0,02
Tpm1-216ENSMUST00000113707 SacsQ9JLC8 4582 aa14,91□□□□□ -0,02
Tpm1-216ENSMUST00000113707 Tmem258P61166 79 aa14,91□□□□□ -0,02
Tpm1-216ENSMUST00000113707 Defb12Q8K4N3 78 aa14,9□□□□□ -0,02
Tpm1-216ENSMUST00000113707 1700074P13RikQ9D9G7 251 aa14,89□□□□□ -0,03
Tpm1-216ENSMUST00000113707 Pkhd1l1Q80ZA4 4249 aa14,87□□□□□ -0,03
Tpm1-216ENSMUST00000113707 Cypt15B1AXS0 87 aa14,86□□□□□ -0,03
Tpm1-216ENSMUST00000113707 Coa6Q8BGD8 79 aa14,84□□□□□ -0,03
Tpm1-216ENSMUST00000113707 Gm19935A0A1B0GSF9 52 aa14,82□□□□□ -0,04
Tpm1-216ENSMUST00000113707 Atox1O08997 68 aaKnown RBP14,81□□□□□ -0,04
Tpm1-216ENSMUST00000113707 Spint4Q9D263 159 aa14,78□□□□□ -0,04
Tpm1-216ENSMUST00000113707 Smim20D3Z7Q2 69 aa14,78□□□□□ -0,04
Tpm1-216ENSMUST00000113707 Smlr1J3QMJ4 66 aa14,77□□□□□ -0,05
Tpm1-216ENSMUST00000113707 Gm10267M0QWD8 85 aa14,71□□□□□ -0,05
Tpm1-216ENSMUST00000113707 Defb13Q8R2I4 64 aa14,69□□□□□ -0,06
Tpm1-216ENSMUST00000113707 Rps29P62274 56 aa14,67□□□□□ -0,06
Tpm1-216ENSMUST00000113707 Vps13bQ80TY5 3993 aa14,66□□□□□ -0,06
Tpm1-216ENSMUST00000113707 Pet100P0DJE0 76 aa14,62□□□□□ -0,07
Tpm1-216ENSMUST00000113707 SnurfQ9WU12 71 aa14,61□□□□□ -0,07
Tpm1-216ENSMUST00000113707 Krtap19-5O08632 62 aa14,59□□□□□ -0,07
Tpm1-216ENSMUST00000113707 Ryr1E9PZQ0 5035 aa14,59□□□□□ -0,07
Tpm1-216ENSMUST00000113707 Rps28P62858 69 aaKnown RBP14,57□□□□□ -0,08
Tpm1-216ENSMUST00000113707 Kmt2cQ8BRH4 4903 aa14,56□□□□□ -0,08
Tpm1-216ENSMUST00000113707 Chtf8P0CG14 533 aa14,53□□□□□ -0,08
Tpm1-216ENSMUST00000113707 Coa5Q99M07 74 aa14,5□□□□□ -0,09
Tpm1-216ENSMUST00000113707 Dnah8Q91XQ0 4731 aa14,49□□□□□ -0,09
Tpm1-216ENSMUST00000113707 Serp1Q9Z1W5 66 aa14,46□□□□□ -0,09
Tpm1-216ENSMUST00000113707 Gm10160F6Y577 67 aa14,41□□□□□ -0,1
Tpm1-216ENSMUST00000113707 Gm26620Q9CY65 116 aa14,41□□□□□ -0,1
Tpm1-216ENSMUST00000113707 Fat3Q8BNA6 4555 aa14,4□□□□□ -0,1
Tpm1-216ENSMUST00000113707 Brk1Q91VR8 75 aa14,39□□□□□ -0,11
Tpm1-216ENSMUST00000113707 Lrp1Q91ZX7 4545 aaKnown RBP14,38□□□□□ -0,11
Tpm1-216ENSMUST00000113707 Defb38Q7TNV7 63 aa14,33□□□□□ -0,12
Tpm1-216ENSMUST00000113707 Cdc42se1Q8BHL7 80 aa14,32□□□□□ -0,12
Tpm1-216ENSMUST00000113707 Gm11939A2A592 99 aa14,31□□□□□ -0,12
Tpm1-216ENSMUST00000113707 D6Ertd527eA0A0N4SWI3 464 aa14,28□□□□□ -0,12
Tpm1-216ENSMUST00000113707 A530084C06RikQ3UTW2 186 aa14,21□□□□□ -0,13
Tpm1-216ENSMUST00000113707 Krtap3-2Q9D638 99 aa14,21□□□□□ -0,14
Tpm1-216ENSMUST00000113707 Krtap3-3Q9D7P0 99 aa14,21□□□□□ -0,14
Tpm1-216ENSMUST00000113707 Gm10643Q3URG9 111 aa14,18□□□□□ -0,14
Tpm1-216ENSMUST00000113707 Gm21798J3QNU5 87 aa14,17□□□□□ -0,14
Tpm1-216ENSMUST00000113707 Gm10197F6QEY5 67 aa14,13□□□□□ -0,15
Tpm1-216ENSMUST00000113707 Gm9736A0A1W2P7N1 277 aa14,12□□□□□ -0,15
Tpm1-216ENSMUST00000113707 Gm10999F6Q4M4 69 aa14,1□□□□□ -0,15
Tpm1-216ENSMUST00000113707 Gm5767A0A0J9YTU8 78 aa14,09□□□□□ -0,15
Tpm1-216ENSMUST00000113707 Q8BGJ3 129 aa14,05□□□□□ -0,16
Tpm1-216ENSMUST00000113707 Abca13Q5SSE9 5034 aa14,03□□□□□ -0,16
Tpm1-216ENSMUST00000113707 Dnhd1D3Z2X2 4750 aa14□□□□□ -0,17
Tpm1-216ENSMUST00000113707 A930033H14RikG5E8X6 103 aa14□□□□□ -0,17
Tpm1-216ENSMUST00000113707 H2al1aQ5M8Q2 105 aa13,96□□□□□ -0,17
Tpm1-216ENSMUST00000113707 2310034C09RikQ9D746 214 aa13,96□□□□□ -0,17
Tpm1-216ENSMUST00000113707 Gm4491E0CX42 125 aa13,95□□□□□ -0,18
Tpm1-216ENSMUST00000113707 Phxr4P15974 95 aa13,93□□□□□ -0,18
Tpm1-216ENSMUST00000113707 Gm5965D3Z724 196 aa13,9□□□□□ -0,18
Tpm1-216ENSMUST00000113707 Birc6O88738 4882 aa13,88□□□□□ -0,19
Tpm1-216ENSMUST00000113707 2310079G19RikQ9D6L6 185 aa13,88□□□□□ -0,19
Tpm1-216ENSMUST00000113707 Mycbp2Q7TPH6 4711 aa13,87□□□□□ -0,19
Tpm1-216ENSMUST00000113707 Herc2Q4U2R1 4836 aa13,87□□□□□ -0,19
Tpm1-216ENSMUST00000113707 Gm20661K7N787 53 aa13,87□□□□□ -0,19
Tpm1-216ENSMUST00000113707 4930507D05RikQ8C9C9 103 aa13,84□□□□□ -0,19
Tpm1-216ENSMUST00000113707 H2al1eQ810S6 105 aa13,8□□□□□ -0,2
Tpm1-216ENSMUST00000113707 Kiaa1109A2AAE1 5005 aa13,79□□□□□ -0,2
Tpm1-216ENSMUST00000113707 Rpl37Q9D823 97 aa13,7□□□□□ -0,22
Tpm1-216ENSMUST00000113707 Krtap15-1Q9QZU5 150 aa13,7□□□□□ -0,22
Tpm1-216ENSMUST00000113707 H2al1bA0A087WP11 105 aa13,63□□□□□ -0,23
Tpm1-216ENSMUST00000113707 9230102O04RikA2ASX7 82 aa13,59□□□□□ -0,23
Tpm1-216ENSMUST00000113707 Defb1P56386 69 aa13,59□□□□□ -0,23
Tpm1-216ENSMUST00000113707 Rnase13Q5GAM7 153 aa13,59□□□□□ -0,23
Tpm1-216ENSMUST00000113707 Gm9821Q8K076 103 aa13,58□□□□□ -0,24
Tpm1-216ENSMUST00000113707 SptssbQ925E8 76 aa13,58□□□□□ -0,24
Tpm1-216ENSMUST00000113707 Ndufb1P0DN34 57 aa13,54□□□□□ -0,24
Tpm1-216ENSMUST00000113707 Uqcr11Q9CPX8 56 aa13,54□□□□□ -0,24
Tpm1-216ENSMUST00000113707 SvipQ3UZP4 77 aa13,52□□□□□ -0,25
Tpm1-216ENSMUST00000113707 Limd2Q8BGB5 128 aa13,51□□□□□ -0,25
Tpm1-216ENSMUST00000113707 Gm10337F7DEP7 55 aa13,44□□□□□ -0,26
Tpm1-216ENSMUST00000113707 HydinQ80W93 5154 aa13,44□□□□□ -0,26
Tpm1-216ENSMUST00000113707 Sox16Q62247 57 aa13,39□□□□□ -0,27
Tpm1-216ENSMUST00000113707 H2al1kJ3QP08 105 aa13,36□□□□□ -0,27
Tpm1-216ENSMUST00000113707 H2al1mQ9DAD9 105 aa13,36□□□□□ -0,27
Tpm1-216ENSMUST00000113707 Gm17416Q30KP4 66 aa13,32□□□□□ -0,28
Tpm1-216ENSMUST00000113707 4933415A04RikQ9D443 101 aa13,28□□□□□ -0,28
Tpm1-216ENSMUST00000113707 Lrp2A2ARV4 4660 aa13,27□□□□□ -0,28
Tpm1-216ENSMUST00000113707 Cox6b2Q80ZN9 88 aa13,27□□□□□ -0,29
Tpm1-216ENSMUST00000113707 Sec61bQ9CQS8 96 aaKnown RBP13,09□□□□□ -0,31
Tpm1-216ENSMUST00000113707 Lce1mQ9CR91 182 aa13,02□□□□□ -0,33
Tpm1-216ENSMUST00000113707 PcloQ9QYX7 5068 aa12,99□□□□□ -0,33
Tpm1-216ENSMUST00000113707 Sec61gP60060 68 aa12,99□□□□□ -0,33
Tpm1-216ENSMUST00000113707 2210017I01RikA0A0A6YVV1 95 aa12,95□□□□□ -0,34
Tpm1-216ENSMUST00000113707 2310057N15RikQ9D6T8 200 aa12,94□□□□□ -0,34
Tpm1-216ENSMUST00000113707 Gm17606F6ZL36 78 aa12,93□□□□□ -0,34
Retrieved 100 of 22,080 RNA–protein pairs in 9,5 ms