RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Gm3880A0A1B0GSB3 72 aa6.71□□□□□ -1.34
Clip1-204ENSMUST00000111564 6030445D17RikE9Q8F9 148 aa6.71□□□□□ -1.34
Clip1-204ENSMUST00000111564 Prr13Q9CQJ5 137 aa6.71□□□□□ -1.34
Clip1-204ENSMUST00000111564 Odf3bQ5M8M2 238 aa6.7□□□□□ -1.34
Clip1-204ENSMUST00000111564 CubnQ9JLB4 3623 aa6.69□□□□□ -1.34
Clip1-204ENSMUST00000111564 Smim29Q8R043 75 aa6.69□□□□□ -1.34
Clip1-204ENSMUST00000111564 Nbeal2Q6ZQA0 2742 aa6.68□□□□□ -1.34
Clip1-204ENSMUST00000111564 Notch1Q01705 2531 aa6.67□□□□□ -1.34
Clip1-204ENSMUST00000111564 Xirp2Q4U4S6 3784 aa6.62□□□□□ -1.35
Clip1-204ENSMUST00000111564 Srrm2Q8BTI8 2703 aaKnown RBP6.61□□□□□ -1.35
Clip1-204ENSMUST00000111564 Tenm1Q9WTS4 2731 aa6.59□□□□□ -1.35
Clip1-204ENSMUST00000111564 Gm5767A0A0J9YTU8 78 aa6.59□□□□□ -1.35
Clip1-204ENSMUST00000111564 Gm9508A0A1W2P7W0 230 aa6.58□□□□□ -1.36
Clip1-204ENSMUST00000111564 Gm10139O88245 57 aa6.58□□□□□ -1.36
Clip1-204ENSMUST00000111564 Gm19426M0QWC7 77 aa6.58□□□□□ -1.36
Clip1-204ENSMUST00000111564 Fam229bQ8CF36 80 aa6.55□□□□□ -1.36
Clip1-204ENSMUST00000111564 ApcQ61315 2845 aa6.53□□□□□ -1.36
Clip1-204ENSMUST00000111564 Sprr1aQ62266 144 aa6.52□□□□□ -1.37
Clip1-204ENSMUST00000111564 Gm16253D3Z167 63 aa6.51□□□□□ -1.37
Clip1-204ENSMUST00000111564 BC029722A0A0N4SW31 51 aa6.5□□□□□ -1.37
Clip1-204ENSMUST00000111564 Krtap29-1A2A5X4 342 aa6.45□□□□□ -1.38
Clip1-204ENSMUST00000111564 Krtap13O88375 197 aa6.44□□□□□ -1.38
Clip1-204ENSMUST00000111564 HrnrQ8VHD8 2496 aa6.44□□□□□ -1.38
Clip1-204ENSMUST00000111564 Pkd1l1Q8R526 2615 aa6.44□□□□□ -1.38
Clip1-204ENSMUST00000111564 Rpl37Q9D823 97 aa6.4□□□□□ -1.38
Clip1-204ENSMUST00000111564 Gm37013Q8K491 104 aa6.4□□□□□ -1.39
Clip1-204ENSMUST00000111564 FcgbpE9Q0B5 2583 aa6.4□□□□□ -1.39
Clip1-204ENSMUST00000111564 2310050C09RikG5E8Z3 280 aa6.39□□□□□ -1.39
Clip1-204ENSMUST00000111564 VwfQ8CIZ8 2813 aa6.36□□□□□ -1.39
Clip1-204ENSMUST00000111564 Hspg2Q05793 3707 aaKnown RBP6.36□□□□□ -1.39
Clip1-204ENSMUST00000111564 Gm9507D3Z5T3 223 aa6.34□□□□□ -1.39
Clip1-204ENSMUST00000111564 Stab2Q8R4U0 2559 aa6.34□□□□□ -1.39
Clip1-204ENSMUST00000111564 Romo1P60603 79 aa6.32□□□□□ -1.4
Clip1-204ENSMUST00000111564 Rps29P62274 56 aa6.24□□□□□ -1.41
Clip1-204ENSMUST00000111564 Krtap10-4Q08EG8 221 aa6.24□□□□□ -1.41
Clip1-204ENSMUST00000111564 Tnp2P11378 117 aa6.24□□□□□ -1.41
Clip1-204ENSMUST00000111564 Gm10382Q3V0T5 144 aa6.24□□□□□ -1.41
Clip1-204ENSMUST00000111564 Krtap14O08640 167 aa6.22□□□□□ -1.41
Clip1-204ENSMUST00000111564 A730071L15RikQ8C4X0 137 aa6.21□□□□□ -1.42
Clip1-204ENSMUST00000111564 Gm2310J3QNJ2 377 aa6.19□□□□□ -1.42
Clip1-204ENSMUST00000111564 Dnah14A0A140LIJ4 4489 aa6.19□□□□□ -1.42
Clip1-204ENSMUST00000111564 Krtap10-10A0A1W2P7T6 217 aa6.19□□□□□ -1.42
Clip1-204ENSMUST00000111564 2310061N02RikQ9D6S9 174 aa6.17□□□□□ -1.42
Clip1-204ENSMUST00000111564 Dnah10D3YYQ8 4591 aa6.17□□□□□ -1.42
Clip1-204ENSMUST00000111564 Gm3646F6S692 53 aa6.16□□□□□ -1.42
Clip1-204ENSMUST00000111564 Cystm1Q8K353 104 aa6.15□□□□□ -1.43
Clip1-204ENSMUST00000111564 Megf8P60882 2789 aa6.14□□□□□ -1.43
Clip1-204ENSMUST00000111564 Muc6Q80T03 2850 aa6.13□□□□□ -1.43
Clip1-204ENSMUST00000111564 Dnah6E9Q0B6 4144 aa6.09□□□□□ -1.43
Clip1-204ENSMUST00000111564 Cox6b2Q80ZN9 88 aa6.09□□□□□ -1.43
Clip1-204ENSMUST00000111564 TnxbO35452 4006 aa6.09□□□□□ -1.44
Clip1-204ENSMUST00000111564 Tenm2Q9WTS5 2764 aa6.05□□□□□ -1.44
Clip1-204ENSMUST00000111564 Gm21887J3QQ04 176 aa6.04□□□□□ -1.44
Clip1-204ENSMUST00000111564 TgO08710 2766 aa6.03□□□□□ -1.44
Clip1-204ENSMUST00000111564 Kmt2aP55200 3966 aa6.03□□□□□ -1.44
Clip1-204ENSMUST00000111564 Gm2696A0A1W2P709 240 aa6.02□□□□□ -1.45
Clip1-204ENSMUST00000111564 Huwe1Q7TMY8 4377 aaKnown RBP6□□□□□ -1.45
Clip1-204ENSMUST00000111564 2310057N15RikQ9D6T8 200 aa5.97□□□□□ -1.45
Clip1-204ENSMUST00000111564 Gm9918Q8BUR5 174 aa5.96□□□□□ -1.46
Clip1-204ENSMUST00000111564 Dnah17Q69Z23 4481 aa5.96□□□□□ -1.46
Clip1-204ENSMUST00000111564 Dnah3Q8BW94 4083 aa5.96□□□□□ -1.46
Clip1-204ENSMUST00000111564 Gm5965D3Z724 196 aa5.95□□□□□ -1.46
Clip1-204ENSMUST00000111564 SmcpP15265 143 aa5.95□□□□□ -1.46
Clip1-204ENSMUST00000111564 D6Ertd527eA0A0N4SWI3 464 aa5.95□□□□□ -1.46
Clip1-204ENSMUST00000111564 Dnah7bL7N1Y0 4068 aa5.92□□□□□ -1.46
Clip1-204ENSMUST00000111564 Tnp1P10856 55 aa5.91□□□□□ -1.46
Clip1-204ENSMUST00000111564 A930033H14RikG5E8X6 103 aa5.9□□□□□ -1.46
Clip1-204ENSMUST00000111564 Csmd3Q80T79 3707 aa5.88□□□□□ -1.47
Clip1-204ENSMUST00000111564 4933415A04RikQ9D443 101 aa5.86□□□□□ -1.47
Clip1-204ENSMUST00000111564 PrkdcP97313 4128 aa5.83□□□□□ -1.48
Clip1-204ENSMUST00000111564 1700042G07RikB1AUF7 90 aa5.82□□□□□ -1.48
Clip1-204ENSMUST00000111564 PlecQ9QXS1 4691 aaKnown RBP5.82□□□□□ -1.48
Clip1-204ENSMUST00000111564 Dnah1E9Q8T7 4250 aa5.79□□□□□ -1.48
Clip1-204ENSMUST00000111564 Dnah11E9Q7N9 4488 aa5.75□□□□□ -1.49
Clip1-204ENSMUST00000111564 Dync2h1Q45VK7 4306 aa5.72□□□□□ -1.49
Clip1-204ENSMUST00000111564 Dnah9B1AR51 4484 aa5.72□□□□□ -1.49
Clip1-204ENSMUST00000111564 Gm40193A0A1B0GT39 78 aa5.71□□□□□ -1.5
Clip1-204ENSMUST00000111564 Ndufaf8A2AMZ4 74 aa5.68□□□□□ -1.5
Clip1-204ENSMUST00000111564 Fras1Q80T14 4010 aa5.67□□□□□ -1.5
Clip1-204ENSMUST00000111564 Vps13dB1ART2 4390 aa5.59□□□□□ -1.51
Clip1-204ENSMUST00000111564 Dnah7aE9Q0T8 4024 aa5.58□□□□□ -1.52
Clip1-204ENSMUST00000111564 Dnah5Q8VHE6 4621 aa5.57□□□□□ -1.52
Clip1-204ENSMUST00000111564 B930094E09RikQ8C4T2 136 aa5.55□□□□□ -1.52
Clip1-204ENSMUST00000111564 Gm9112A2AI92 75 aa5.52□□□□□ -1.53
Clip1-204ENSMUST00000111564 Ryr3A2AGL3 4863 aa5.51□□□□□ -1.53
Clip1-204ENSMUST00000111564 Dnah7cA0A087WR13 4024 aa5.51□□□□□ -1.53
Clip1-204ENSMUST00000111564 Gm17416Q30KP4 66 aa5.49□□□□□ -1.53
Clip1-204ENSMUST00000111564 Prm2P07978 107 aa5.49□□□□□ -1.53
Clip1-204ENSMUST00000111564 Dnah2P0C6F1 4456 aa5.48□□□□□ -1.53
Clip1-204ENSMUST00000111564 Dync1h1Q9JHU4 4644 aaKnown RBP5.46□□□□□ -1.54
Clip1-204ENSMUST00000111564 Gm20537G3UYK7 97 aa5.45□□□□□ -1.54
Clip1-204ENSMUST00000111564 Gm9736A0A1W2P7N1 277 aa5.45□□□□□ -1.54
Clip1-204ENSMUST00000111564 Stard9Q80TF6 4561 aa5.44□□□□□ -1.54
Clip1-204ENSMUST00000111564 Pkd1O08852 4293 aa5.44□□□□□ -1.54
Clip1-204ENSMUST00000111564 ApobE9Q414 4505 aa5.43□□□□□ -1.54
Clip1-204ENSMUST00000111564 Fat1A0A1L1SQU7 4645 aa5.39□□□□□ -1.55
Clip1-204ENSMUST00000111564 2210017I01RikA0A0A6YVV1 95 aa5.38□□□□□ -1.55
Clip1-204ENSMUST00000111564 Ryr2E9Q401 4966 aaKnown RBP5.36□□□□□ -1.55
Clip1-204ENSMUST00000111564 Lrp1bQ9JI18 4599 aa5.36□□□□□ -1.55
Clip1-204ENSMUST00000111564 4933428G20RikQ9D3X4 101 aa5.35□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms